Conservation of cofitness between CSW01_02490 and CSW01_00560 in Vibrio cholerae E7946 ATCC 55056

95 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02490 glutathione synthetase 1.0 CSW01_00560 DNA polymerase I 0.89 11
Serratia liquefaciens MT49 0.80 IAI46_21390 glutathione synthase 0.66 IAI46_24985 DNA polymerase I low > 86
Pectobacterium carotovorum WPP14 0.78 HER17_RS02635 glutathione synthase 0.65 HER17_RS21470 DNA polymerase I — —
Dickeya dadantii 3937 0.77 DDA3937_RS18560 glutathione synthase 0.63 DDA3937_RS00105 DNA polymerase I — —
Rahnella sp. WP5 0.77 EX31_RS02665 glutathione synthase 0.65 EX31_RS15905 DNA polymerase I low > 89
Dickeya dianthicola 67-19 0.76 HGI48_RS18495 glutathione synthase 0.63 HGI48_RS21260 DNA polymerase I — —
Escherichia coli ECOR38 0.76 HEPCGN_18580 gshB glutathione synthase 0.64 HEPCGN_12785 polA DNA polymerase I — —
Escherichia fergusonii Becca 0.76 EFB2_00955 Glutathione synthetase 0.64 EFB2_04753 DNA polymerase I — —
Dickeya dianthicola ME23 0.76 DZA65_RS19630 glutathione synthase 0.62 DZA65_RS22235 DNA polymerase I — —
Escherichia coli Nissle 1917 0.76 ECOLIN_RS16395 glutathione synthase 0.64 ECOLIN_RS22270 DNA polymerase I — —
Escherichia coli ECRC102 0.76 NIAGMN_17040 gshB glutathione synthase 0.64 NIAGMN_11905 polA DNA polymerase I — —
Escherichia coli ECRC100 0.76 OKFHMN_19275 gshB glutathione synthase 0.64 OKFHMN_14150 polA DNA polymerase I — —
Escherichia coli BW25113 0.76 b2947 gshB glutathione synthetase (NCBI) 0.64 b3863 polA DNA polymerase I (NCBI) low > 76
Escherichia coli ECRC101 0.76 MCAODC_09795 gshB glutathione synthase 0.64 MCAODC_04650 polA DNA polymerase I — —
Escherichia coli ECRC62 0.76 BNILDI_09725 gshB glutathione synthase 0.64 BNILDI_05250 polA DNA polymerase I — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_00771 Glutathione synthetase 0.64 OHPLBJKB_04189 DNA polymerase I — —
Escherichia coli ECRC99 0.76 KEDOAH_08865 gshB glutathione synthase 0.64 KEDOAH_14000 polA DNA polymerase I — —
Escherichia coli ECOR27 0.76 NOLOHH_11145 gshB glutathione synthase 0.64 NOLOHH_06280 polA DNA polymerase I — —
Escherichia coli BL21 0.76 ECD_02777 glutathione synthetase 0.64 ECD_03749 5 — —
Escherichia coli ECRC98 0.76 JDDGAC_22905 gshB glutathione synthase 0.64 JDDGAC_17775 polA DNA polymerase I — —
Erwinia amylovora T8 0.76 OLJFJH_08570 glutathione synthase 0.64 OLJFJH_05470 DNA polymerase I low > 58
Enterobacter sp. TBS_079 0.76 MPMX20_03805 Glutathione synthetase 0.64 MPMX20_04601 DNA polymerase I low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF3049 Glutathione synthetase (EC 6.3.2.3) 0.63 GFF2216 DNA polymerase I (EC 2.7.7.7) low > 78
Enterobacter asburiae PDN3 0.75 EX28DRAFT_2985 glutathione synthase (EC 6.3.2.3) 0.64 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) — —
Klebsiella michiganensis M5al 0.75 BWI76_RS24075 glutathione synthase 0.63 BWI76_RS00355 DNA polymerase I low > 92
Erwinia tracheiphila SCR3 0.75 LU632_RS05480 gshB glutathione synthase 0.64 LU632_RS23870 polA DNA polymerase I — —
Pantoea sp. MT58 0.74 IAI47_03615 glutathione synthase 0.65 IAI47_00430 DNA polymerase I low > 76
Shewanella loihica PV-4 0.73 Shew_3225 glutathione synthetase (RefSeq) 0.63 Shew_3714 DNA polymerase I (RefSeq) low > 60
Shewanella amazonensis SB2B 0.71 Sama_0574 glutathione synthetase (RefSeq) 0.63 Sama_0093 DNA-directed DNA polymerase (RefSeq) low > 62
Shewanella sp. ANA-3 0.71 Shewana3_3445 glutathione synthetase (RefSeq) 0.62 Shewana3_4109 DNA polymerase I (RefSeq) — —
Shewanella oneidensis MR-1 0.70 SO0831 gshB glutathione synthetase (NCBI ptt file) 0.62 SO4669 polA DNA polymerase I (NCBI ptt file) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_0487 glutathione synthase 0.55 Psyr_0270 DNA polymerase I low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_0487 glutathione synthase 0.55 Psyr_0270 DNA polymerase I low > 86
Pseudomonas putida KT2440 0.66 PP_4993 Glutathione synthetase 0.58 PP_0123 DNA polymerase I, 5 0.31 40
Pseudomonas sp. S08-1 0.65 OH686_10915 glutathione synthase 0.57 OH686_12215 DNA polymerase I low > 80
Pseudomonas sp. BP01 0.65 JOY50_RS09725 gshB glutathione synthase 0.58 JOY50_RS21110 polA DNA polymerase I low > 84
Pseudomonas sp. SVBP6 0.65 COO64_RS13605 gshB glutathione synthase 0.57 COO64_RS02475 polA DNA polymerase I 0.37 54
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_4612 Glutathione synthetase (EC 6.3.2.3) 0.54 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas sp. RS175 0.65 PFR28_04232 Glutathione synthetase 0.54 PFR28_04624 DNA polymerase I low > 88
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_13475 glutathione synthetase 0.55 AO356_11465 DNA polymerase I low > 104
Pseudomonas sp. DMC3 0.65 GFF199 Glutathione synthetase 0.55 GFF631 DNA polymerase I low > 89
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3) 0.54 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) low > 87
Pseudomonas aeruginosa PA14 0.64 IKLFDK_23385 glutathione synthase 0.58 IKLFDK_25945 DNA polymerase I low > 101
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_2352 Glutathione synthetase (EC 6.3.2.3) 0.55 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_08110 glutathione synthetase 0.56 AO353_10930 DNA polymerase I low > 101
Pseudomonas fluorescens SBW25 0.63 PFLU_RS28320 glutathione synthase 0.55 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas simiae WCS417 0.63 PS417_26675 glutathione synthetase 0.56 PS417_00405 DNA polymerase I — —
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS28320 glutathione synthase 0.55 PFLU_RS00395 DNA polymerase I 0.21 60
Marinobacter adhaerens HP15 0.62 HP15_3512 glutathione synthetase 0.52 HP15_293 DNA polymerase I low > 73
Alteromonas macleodii MIT1002 0.62 MIT1002_03055 Glutathione synthetase 0.62 MIT1002_00014 DNA polymerase I low > 70
Pseudomonas stutzeri RCH2 0.61 Psest_0296 glutathione synthetase, prokaryotic 0.58 Psest_4219 DNA polymerase I low > 67
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0189 glutathione synthase (EC 6.3.2.3) 0.59 B158DRAFT_0499 DNA polymerase I (EC 2.7.7.7) — —
Lysobacter sp. OAE881 0.56 ABIE51_RS05210 glutathione synthase 0.49 ABIE51_RS02010 DNA polymerase I — —
Rhodanobacter sp000427505 FW510-R12 0.55 LRK53_RS05725 glutathione synthase 0.52 LRK53_RS01570 DNA polymerase I low > 60
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_11075 gshB glutathione synthase 0.52 OKGIIK_16785 polA DNA polymerase I low > 52
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1501.1 Glutathione synthetase (EC 6.3.2.3) 0.49 Xcc-8004.5105.1 DNA polymerase I (EC 2.7.7.7) — —
Rhodanobacter denitrificans MT42 0.54 LRK55_RS03970 glutathione synthase 0.52 LRK55_RS06585 DNA polymerase I — —
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS04200 glutathione synthase 0.52 LRK54_RS06840 DNA polymerase I — —
Acinetobacter radioresistens SK82 0.54 MPMX26_02936 Glutathione synthetase 0.46 MPMX26_00574 DNA polymerase I low > 36
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS10370 glutathione synthase 0.52 ABZR86_RS17015 DNA polymerase I — —
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS00435 glutathione synthetase 0.53 HSERO_RS02260 DNA polymerase I low > 78
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS10860 glutathione synthase 0.52 RALBFv3_RS03750 DNA polymerase I low > 76
Ralstonia solanacearum UW163 0.49 UW163_RS02720 glutathione synthase 0.52 UW163_RS09920 DNA polymerase I — —
Variovorax sp. OAS795 0.49 ABID97_RS04630 glutathione synthase 0.47 ABID97_RS09180 DNA polymerase I low > 91
Dechlorosoma suillum PS 0.48 Dsui_0746 glutathione synthetase 0.52 Dsui_0459 DNA polymerase I low > 51
Ralstonia solanacearum GMI1000 0.48 RS_RS01700 glutathione synthetase 0.52 RS_RS11195 DNA polymerase I low > 80
Ralstonia solanacearum PSI07 0.48 RPSI07_RS22450 glutathione synthase 0.52 RPSI07_RS13480 DNA polymerase I low > 81
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS06710 glutathione synthase 0.52 ABZR87_RS15680 DNA polymerase I low > 80
Methylophilus sp. DMC18 0.47 GFF2174 Glutathione synthetase 0.52 GFF1658 DNA polymerase I low > 43
Acidovorax sp. GW101-3H11 0.47 Ac3H11_711 Glutathione synthetase (EC 6.3.2.3) 0.48 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7) — —
Variovorax sp. SCN45 0.47 GFF6322 Glutathione synthetase (EC 6.3.2.3) 0.48 GFF4006 DNA polymerase I (EC 2.7.7.7) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF2650 Glutathione synthetase (EC 6.3.2.3) 0.45 GFF5584 DNA polymerase I (EC 2.7.7.7) low > 90
Paraburkholderia graminis OAS925 0.47 ABIE53_000657 glutathione synthase 0.51 ABIE53_004852 DNA polymerase-1 low > 113
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS01780 glutathione synthetase 0.51 RR42_RS15050 DNA polymerase I low > 128
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS02560 glutathione synthetase 0.51 BPHYT_RS33610 DNA polymerase I low > 109
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_02010 glutathione synthase 0.51 H281DRAFT_06022 DNA polymerase I low > 103
Castellaniella sp019104865 MT123 0.46 ABCV34_RS04795 glutathione synthase 0.47 ABCV34_RS02195 DNA polymerase I low > 48
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS01415 glutathione synthase 0.52 QEN71_RS17885 DNA polymerase I — —
Phaeobacter inhibens DSM 17395 0.41 PGA1_c26710 glutathione synthetase GshB 0.39 PGA1_c31780 DNA polymerase I — —
Rhodospirillum rubrum S1H 0.40 Rru_A3690 Glutathione synthetase (NCBI) 0.34 Rru_A3514 DNA polymerase A (NCBI) — —
Azospirillum sp. SherDot2 0.40 MPMX19_02474 Glutathione synthetase 0.39 MPMX19_04869 DNA polymerase I — —
Azospirillum brasilense Sp245 0.40 AZOBR_RS02170 glutathione synthetase 0.38 AZOBR_RS30685 DNA polymerase low > 97
Sinorhizobium meliloti 1021 0.40 SMc00419 glutathione synthetase 0.29 SMc02850 DNA polymerase I low > 103
Magnetospirillum magneticum AMB-1 0.40 AMB_RS22800 glutathione synthase 0.39 AMB_RS21305 DNA polymerase I — —
Rhizobium sp. OAE497 0.39 ABIE40_RS01405 glutathione synthase 0.38 ABIE40_RS00490 DNA polymerase I low > 107
Xanthobacter sp. DMC5 0.39 GFF2245 Glutathione synthetase 0.37 GFF1973 DNA polymerase I — —
Agrobacterium fabrum C58 0.38 Atu0310 glutathione synthetase 0.38 Atu0110 DNA polymerase I — —
Caulobacter crescentus NA1000 0.38 CCNA_00140 glutathione synthetase 0.39 CCNA_03577 DNA polymerase I — —
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_00140 glutathione synthetase 0.39 CCNA_03577 DNA polymerase I — —
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS14140 glutathione synthase 0.38 A4249_RS13840 DNA polymerase I — —
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_2757 glutathione synthase (EC 6.3.2.3) 0.35 Ga0059261_2244 DNA polymerase I (EC 2.7.7.7) — —
Bosea sp. OAE506 0.36 ABIE41_RS03330 glutathione synthase 0.34 ABIE41_RS03570 DNA polymerase I — —
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_2324 gshB glutathione synthetase 0.29 Synpcc7942_0194 polA DNA polymerase I — —
Dinoroseobacter shibae DFL-12 0.36 Dshi_2829 glutathione synthetase (RefSeq) 0.39 Dshi_2909 DNA polymerase I (RefSeq) — —
Synechocystis sp000284455 PCC 6803 0.36 SGL_RS06800 glutathione synthase 0.28 SGL_RS16290 DNA polymerase I — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_17395 glutathione synthetase 0.35 CA264_16535 DNA polymerase I — —

Not shown: 1 genomes with orthologs for CSW01_02490 only; 13 genomes with orthologs for CSW01_00560 only