| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Caulobacter crescentus NA1000 Δfur | 1.0 | CCNA_03464 | | glycine cleavage system H protein | 1.0 | CCNA_02975 | | excinuclease ABC subunit C | 0.67 | 15 |
| Caulobacter crescentus NA1000 | 1.00 | CCNA_03464 | | glycine cleavage system H protein | 1.00 | CCNA_02975 | | excinuclease ABC subunit C | low | > 66 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.72 | A4249_RS09330 | | glycine cleavage system protein GcvH | 0.71 | A4249_RS01670 | | excinuclease ABC subunit UvrC | 0.41 | 35 |
| Azospirillum brasilense Sp245 | 0.64 | AZOBR_RS10465 | | glycine cleavage system protein H | 0.57 | AZOBR_RS08965 | | excinuclease ABC subunit C | — | — |
| Azospirillum sp. SherDot2 | 0.62 | MPMX19_01030 | | Glycine cleavage system H protein | 0.55 | MPMX19_01070 | | UvrABC system protein C | low | > 112 |
| Sphingomonas koreensis DSMZ 15582 | 0.60 | Ga0059261_3257 | | glycine cleavage system H protein | 0.47 | Ga0059261_3186 | | Excinuclease ABC subunit C | low | > 68 |
| Rhodospirillum rubrum S1H | 0.59 | Rru_A3050 | | Glycine cleavage H-protein (NCBI) | 0.54 | Rru_A2220 | | Excinuclease ABC, C subunit (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.58 | AMB_RS03930 | | glycine cleavage system protein H | 0.55 | AMB_RS19240 | | UvrABC system protein C | low | > 64 |
| Variovorax sp. SCN45 | 0.57 | GFF6477 | | Glycine cleavage system H protein | 0.33 | GFF2859 | | Excinuclease ABC subunit C | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.56 | GFF5214 | | Glycine cleavage system H protein | 0.31 | GFF3847 | | Excinuclease ABC subunit C | — | — |
| Sinorhizobium meliloti 1021 | 0.56 | SMc02048 | | glycine cleavage system protein H | 0.60 | SMc00602 | | excinuclease ABC subunit C | low | > 103 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS19650 | | glycine cleavage system protein GcvH | 0.33 | ABID97_RS10635 | | excinuclease ABC subunit UvrC | — | — |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS18000 | | glycine cleavage system protein GcvH | 0.34 | HER17_RS07715 | | excinuclease ABC subunit UvrC | low | > 75 |
| Agrobacterium fabrum C58 | 0.54 | Atu1463 | | glycine cleavage system component H | 0.58 | Atu1129 | | excinuclease ABC chain C | low | > 89 |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_18815 | gcvH | glycine cleavage system protein GcvH | 0.35 | HEPCGN_04180 | uvrC | excinuclease ABC subunit UvrC | low | > 87 |
| Dickeya dianthicola ME23 | 0.54 | DZA65_RS03440 | | glycine cleavage system protein GcvH | 0.34 | DZA65_RS14285 | | excinuclease ABC subunit UvrC | low | > 75 |
| Rhizobium sp. OAE497 | 0.54 | ABIE40_RS09945 | | glycine cleavage system protein GcvH | 0.57 | ABIE40_RS06500 | | excinuclease ABC subunit UvrC | — | — |
| Dickeya dianthicola 67-19 | 0.54 | HGI48_RS03395 | | glycine cleavage system protein GcvH | 0.34 | HGI48_RS13795 | | excinuclease ABC subunit UvrC | low | > 71 |
| Klebsiella michiganensis M5al | 0.54 | BWI76_RS23875 | | glycine cleavage system protein H | 0.34 | BWI76_RS18330 | | excinuclease ABC subunit C | low | > 92 |
| Escherichia coli ECRC100 | 0.53 | OKFHMN_19525 | gcvH | glycine cleavage system protein GcvH | 0.35 | OKFHMN_25825 | uvrC | excinuclease ABC subunit UvrC | low | > 80 |
| Escherichia coli ECRC99 | 0.53 | KEDOAH_08615 | gcvH | glycine cleavage system protein GcvH | 0.35 | KEDOAH_02265 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.53 | GFF3004 | | Glycine cleavage system H protein | 0.34 | GFF1700 | | Excinuclease ABC subunit C | low | > 78 |
| Escherichia fergusonii Becca | 0.53 | EFB2_00998 | | Glycine cleavage system H protein | 0.35 | EFB2_02033 | | UvrABC system protein C | low | > 86 |
| Escherichia coli BW25113 | 0.53 | b2904 | gcvH | glycine cleavage system protein H (NCBI) | 0.35 | b1913 | uvrC | excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) | low | > 76 |
| Escherichia coli ECRC101 | 0.53 | MCAODC_10045 | gcvH | glycine cleavage system protein GcvH | 0.35 | MCAODC_19565 | uvrC | excinuclease ABC subunit UvrC | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.53 | OHPLBJKB_00811 | | Glycine cleavage system H protein | 0.35 | OHPLBJKB_01816 | | UvrABC system protein C | low | > 73 |
| Escherichia coli ECRC102 | 0.53 | NIAGMN_17290 | gcvH | glycine cleavage system protein GcvH | 0.35 | NIAGMN_02225 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli BL21 | 0.53 | ECD_02736 | | glycine cleavage complex lipoylprotein | 0.35 | ECD_01878 | | excinuclease UvrABC, endonuclease subunit | low | > 61 |
| Escherichia coli Nissle 1917 | 0.53 | ECOLIN_RS16170 | | glycine cleavage system protein GcvH | 0.35 | ECOLIN_RS10895 | | excinuclease ABC subunit UvrC | low | > 55 |
| Escherichia coli ECRC98 | 0.53 | JDDGAC_23165 | gcvH | glycine cleavage system protein GcvH | 0.35 | JDDGAC_00415 | uvrC | excinuclease ABC subunit UvrC | low | > 86 |
| Phaeobacter inhibens DSM 17395 | 0.53 | PGA1_78p00300 | | glycine cleavage system protein GcvH | 0.55 | PGA1_c02880 | | uvrABC system protein C | — | — |
| Dinoroseobacter shibae DFL-12 | 0.53 | Dshi_2681 | | glycine cleavage system H protein (RefSeq) | 0.58 | Dshi_0644 | | excinuclease ABC, C subunit (RefSeq) | — | — |
| Ralstonia solanacearum PSI07 | 0.52 | RPSI07_RS08580 | | glycine cleavage system protein H | 0.33 | RPSI07_RS18935 | | excinuclease ABC subunit UvrC | low | > 81 |
| Escherichia coli ECRC62 | 0.52 | BNILDI_09975 | gcvH | glycine cleavage system protein GcvH | 0.35 | BNILDI_15235 | uvrC | excinuclease ABC subunit UvrC | low | > 75 |
| Escherichia coli ECOR27 | 0.52 | NOLOHH_11440 | gcvH | glycine cleavage system protein GcvH | 0.35 | NOLOHH_16445 | uvrC | excinuclease ABC subunit UvrC | low | > 75 |
| Enterobacter sp. TBS_079 | 0.51 | MPMX20_03763 | | Glycine cleavage system H protein | 0.33 | MPMX20_02838 | | UvrABC system protein C | low | > 85 |
| Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_166 | | Glycine cleavage system H protein | 0.32 | Ac3H11_373 | | Excinuclease ABC subunit C | low | > 79 |
| Ralstonia solanacearum GMI1000 | 0.51 | RS_RS16505 | | glycine cleavage system protein H | 0.33 | RS_RS05305 | | excinuclease ABC subunit UvrC | low | > 80 |
| Ralstonia solanacearum UW163 | 0.51 | UW163_RS04955 | | glycine cleavage system protein H | 0.33 | UW163_RS11990 | | excinuclease ABC subunit UvrC | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS08655 | | glycine cleavage system protein H | 0.33 | RALBFv3_RS14525 | | excinuclease ABC subunit UvrC | low | > 76 |
| Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_2956 | | glycine cleavage system H protein | 0.33 | EX28DRAFT_0634 | | Excinuclease ABC subunit C | low | > 76 |
| Pseudomonas putida KT2440 | 0.51 | PP_5193 | | glycine cleavage system H protein 2 | 0.33 | PP_4098 | | UvrABC system protein C | low | > 96 |
| Pantoea sp. MT58 | 0.51 | IAI47_03770 | | glycine cleavage system protein GcvH | 0.34 | IAI47_12465 | | excinuclease ABC subunit UvrC | low | > 76 |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_019930 | | glycine cleavage system protein GcvH | 0.55 | TX73_006010 | | excinuclease ABC subunit UvrC | low | > 86 |
| Serratia liquefaciens MT49 | 0.50 | IAI46_20855 | | glycine cleavage system protein GcvH | 0.34 | IAI46_09210 | | excinuclease ABC subunit UvrC | low | > 86 |
| Ralstonia sp. UNC404CL21Col | 0.50 | ABZR87_RS03930 | | glycine cleavage system protein GcvH | 0.33 | ABZR87_RS10245 | | excinuclease ABC subunit UvrC | low | > 80 |
| Rahnella sp. WP5 | 0.50 | EX31_RS21515 | | glycine cleavage system protein GcvH | 0.34 | EX31_RS24150 | | excinuclease ABC subunit UvrC | low | > 89 |
| Shewanella amazonensis SB2B | 0.50 | Sama_2720 | | glycine cleavage system protein H (RefSeq) | 0.32 | Sama_1608 | uvrC | excinuclease ABC subunit C (RefSeq) | low | > 62 |
| Pseudomonas sp. S08-1 | 0.50 | OH686_11170 | | glycine cleavage system H protein | 0.32 | OH686_00340 | | excinuclease ABC subunit C | low | > 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.50 | CSW01_15335 | | glycine cleavage system protein H | 0.33 | CSW01_06140 | | excinuclease ABC subunit C | low | > 62 |
| Parabacteroides merdae CL09T00C40 | 0.50 | HMPREF1078_RS05930 | | glycine cleavage system protein GcvH | 0.23 | HMPREF1078_RS06310 | | excinuclease ABC subunit UvrC | low | > 61 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_4486 | | Glycine cleavage system H protein | 0.33 | Pf6N2E2_2021 | | Excinuclease ABC subunit C | low | > 103 |
| Erwinia tracheiphila SCR3 | 0.49 | LU632_RS05910 | gcvH | glycine cleavage system protein GcvH | 0.33 | LU632_RS10195 | uvrC | excinuclease ABC subunit UvrC | low | > 74 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.49 | ABZR88_RS00300 | | glycine cleavage system protein GcvH | 0.20 | ABZR88_RS04150 | | excinuclease ABC subunit UvrC | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.48 | RR42_RS20065 | | glycine cleavage system protein H | 0.32 | RR42_RS14000 | | excinuclease ABC subunit C | low | > 128 |
| Phocaeicola vulgatus CL09T03C04 | 0.48 | HMPREF1058_RS12495 | | glycine cleavage system protein GcvH | 0.22 | HMPREF1058_RS11525 | | excinuclease ABC subunit UvrC | 0.74 | 61 |
| Phocaeicola dorei CL03T12C01 | 0.48 | ABI39_RS04240 | | glycine cleavage system protein GcvH | 0.22 | ABI39_RS05415 | | excinuclease ABC subunit UvrC | low | > 72 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_13040 | | glycine cleavage system protein H | 0.34 | AO356_00350 | | excinuclease ABC subunit C | low | > 104 |
| Dickeya dadantii 3937 | 0.48 | DDA3937_RS03250 | | glycine cleavage system protein GcvH | 0.34 | DDA3937_RS13700 | | excinuclease ABC subunit UvrC | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.47 | B158DRAFT_0544 | | glycine cleavage system H protein | 0.34 | B158DRAFT_1273 | | Excinuclease ABC subunit C | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.47 | BT2519 | | putative glycine cleavage system H protein (NCBI ptt file) | 0.23 | BT3266 | | excinuclease ABC subunit C (NCBI ptt file) | low | > 81 |
| Marinobacter adhaerens HP15 | 0.47 | HP15_459 | | glycine cleavage H-protein, subgroup | 0.32 | HP15_1568 | | excinuclease ABC subunit C | low | > 73 |
| Bacteroides ovatus ATCC 8483 | 0.47 | BACOVA_01614 | | glycine cleavage system H protein | 0.22 | BACOVA_01365 | | excinuclease ABC, C subunit | low | > 94 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_08730 | | glycine cleavage system protein H | 0.34 | AO353_21835 | | excinuclease ABC subunit C | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_2235 | | Glycine cleavage system H protein | 0.34 | Pf1N1B4_5618 | | Excinuclease ABC subunit C | low | > 87 |
| Shewanella sp. ANA-3 | 0.46 | Shewana3_3500 | | glycine cleavage system protein H (RefSeq) | 0.31 | Shewana3_1609 | uvrC | excinuclease ABC subunit C (RefSeq) | low | > 73 |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS29210 | | glycine cleavage system protein GcvH | 0.28 | QEN71_RS04665 | | excinuclease ABC subunit UvrC | low | > 153 |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_02972 | | Glycine cleavage system H protein | 0.33 | MIT1002_02153 | | Excinuclease ABC subunit C | low | > 70 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.46 | CA265_RS18980 | | glycine cleavage system protein H | 0.20 | CA265_RS18110 | | excinuclease ABC subunit C | — | — |
| Bacteroides stercoris CC31F | 0.46 | HMPREF1181_RS00935 | | glycine cleavage system protein GcvH | 0.23 | HMPREF1181_RS02095 | | excinuclease ABC subunit UvrC | low | > 56 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.46 | Echvi_4084 | | glycine cleavage system H protein | 0.26 | Echvi_0619 | | excinuclease ABC, C subunit | low | > 79 |
| Shewanella oneidensis MR-1 | 0.46 | SO0780 | gcvH | glycine cleavage system H protein (NCBI ptt file) | 0.32 | SO1861 | uvrC | excinuclease ABC, C subunit (NCBI ptt file) | low | > 76 |
| Pseudomonas fluorescens SBW25-INTG | 0.46 | PFLU_RS28910 | | glycine cleavage system protein GcvH | 0.34 | PFLU_RS10770 | | excinuclease ABC subunit UvrC | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.46 | PFLU_RS28910 | | glycine cleavage system protein GcvH | 0.34 | PFLU_RS10770 | | excinuclease ABC subunit UvrC | low | > 109 |
| Shewanella loihica PV-4 | 0.46 | Shew_3063 | | glycine cleavage system protein H (RefSeq) | 0.31 | Shew_1825 | uvrC | excinuclease ABC subunit C (RefSeq) | low | > 60 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.46 | DVU1426 | gcvH | glycine cleavage system H protein (TIGR) | 0.14 | DVU0801 | uvrC | excinuclease ABC, C subunit (TIGR) | low | > 55 |
| Synechococcus elongatus PCC 7942 | 0.46 | Synpcc7942_2046 | gcsH | glycine cleavage system protein H | 0.27 | Synpcc7942_1945 | uvrC | excinuclease ABC subunit C | low | > 38 |
| Dyella japonica UNC79MFTsu3.2 | 0.46 | ABZR86_RS18880 | | glycine cleavage system protein GcvH | 0.36 | ABZR86_RS02245 | | excinuclease ABC subunit UvrC | low | > 74 |
| Pseudomonas simiae WCS417 | 0.46 | PS417_22355 | | glycine cleavage system protein H | 0.34 | PS417_10725 | | excinuclease ABC subunit C | low | > 88 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.46 | CA264_14555 | | glycine cleavage system protein H | 0.20 | CA264_16350 | | excinuclease ABC subunit C | — | — |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_01310 | gcvH | glycine cleavage system protein GcvH | 0.36 | OKGIIK_06930 | uvrC | excinuclease ABC subunit UvrC | low | > 52 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_0182 | | glycine cleavage system H protein | 0.33 | Psest_2259 | | excinuclease ABC, C subunit | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_903 | | Glycine cleavage system H protein | 0.34 | PfGW456L13_2886 | | Excinuclease ABC subunit C | low | > 87 |
| Pseudomonas sp. RS175 | 0.45 | PFR28_03382 | | Glycine cleavage system H protein | 0.33 | PFR28_01411 | | UvrABC system protein C | low | > 88 |
| Dechlorosoma suillum PS | 0.44 | Dsui_2736 | | glycine cleavage system H protein | 0.35 | Dsui_2470 | | excinuclease ABC, C subunit | low | > 51 |
| Acinetobacter radioresistens SK82 | 0.44 | MPMX26_01479 | | Glycine cleavage system H protein | 0.28 | MPMX26_00228 | | UvrABC system protein C | low | > 36 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.43 | Xcc-8004.1568.1 | | Glycine cleavage system H protein | 0.33 | Xcc-8004.2477.1 | | Excinuclease ABC subunit C | low | > 74 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.43 | Psyr_0247 | | glycine cleavage system H protein | 0.32 | Psyr_2896 | | Excinuclease ABC subunit C | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.43 | Psyr_0247 | | glycine cleavage system H protein | 0.32 | Psyr_2896 | | Excinuclease ABC subunit C | low | > 86 |
| Castellaniella sp019104865 MT123 | 0.42 | ABCV34_RS08840 | | glycine cleavage system protein GcvH | 0.34 | ABCV34_RS06980 | | excinuclease ABC subunit UvrC | low | > 48 |
| Lysobacter sp. OAE881 | 0.41 | ABIE51_RS16360 | | glycine cleavage system protein GcvH | 0.35 | ABIE51_RS12455 | | excinuclease ABC subunit UvrC | low | > 62 |
| Mycobacterium tuberculosis H37Rv | 0.41 | Rv1826 | | Probable glycine cleavage system H protein GcvH | 0.26 | Rv1420 | | Probable excinuclease ABC (subunit C-nuclease) UvrC | — | — |
| Rhodanobacter denitrificans MT42 | 0.39 | LRK55_RS05275 | | glycine cleavage system protein GcvH | 0.38 | LRK55_RS00120 | | excinuclease ABC subunit UvrC | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.39 | LRK54_RS05505 | | glycine cleavage system protein GcvH | 0.38 | LRK54_RS00380 | | excinuclease ABC subunit UvrC | low | > 59 |
| Herbaspirillum seropedicae SmR1 | 0.35 | HSERO_RS07915 | | glycine cleavage system protein H | 0.35 | HSERO_RS09690 | | excinuclease ABC subunit C | low | > 78 |
Not shown: 5 genomes with orthologs for CCNA_03464 only; 3 genomes with orthologs for CCNA_02975 only