Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Klebsiella michiganensis M5al | 1.0 | BWI76_RS02510 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 1.0 | BWI76_RS09910 | | dihydroorotate dehydrogenase (quinone) | 0.24 | 20 |
Enterobacter asburiae PDN3 | 0.80 | EX28DRAFT_3364 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.92 | EX28DRAFT_1998 | | dihydroorotate oxidase A (EC 1.3.3.1) | — | — |
Escherichia coli Nissle 1917 | 0.79 | ECOLIN_RS24205 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.93 | ECOLIN_RS04965 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Enterobacter sp. TBS_079 | 0.79 | MPMX20_00448 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.92 | MPMX20_01596 | | Dihydroorotate dehydrogenase (quinone) | low | > 85 |
Escherichia coli BW25113 | 0.79 | b4167 | yjeF | predicted carbohydrate kinase (NCBI) | 0.93 | b0945 | pyrD | dihydroorotate dehydrogenase (NCBI) | low | > 76 |
Escherichia coli BL21 | 0.79 | ECD_04034 | | bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase | 0.93 | ECD_00949 | | dihydro-orotate oxidase, FMN-linked | low | > 61 |
Escherichia coli ECRC102 | 0.78 | NIAGMN_10130 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.93 | NIAGMN_03015 | pyrD | quinone-dependent dihydroorotate dehydrogenase | — | — |
Escherichia coli ECRC99 | 0.78 | KEDOAH_15875 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.93 | KEDOAH_22440 | pyrD | quinone-dependent dihydroorotate dehydrogenase | — | — |
Escherichia coli ECRC100 | 0.78 | OKFHMN_12280 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.93 | OKFHMN_05295 | pyrD | quinone-dependent dihydroorotate dehydrogenase | low | > 80 |
Escherichia coli ECRC98 | 0.78 | JDDGAC_15920 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.93 | JDDGAC_08905 | pyrD | quinone-dependent dihydroorotate dehydrogenase | low | > 86 |
Escherichia coli ECRC101 | 0.78 | MCAODC_02795 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.93 | MCAODC_24685 | pyrD | quinone-dependent dihydroorotate dehydrogenase | low | > 87 |
Escherichia fergusonii Becca | 0.78 | EFB2_04368 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.93 | EFB2_03126 | | Dihydroorotate dehydrogenase (quinone) | low | > 86 |
Escherichia coli ECRC62 | 0.78 | BNILDI_06945 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.93 | BNILDI_20015 | pyrD | quinone-dependent dihydroorotate dehydrogenase | low | > 75 |
Escherichia coli ECOR27 | 0.78 | NOLOHH_04545 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.93 | NOLOHH_21850 | pyrD | quinone-dependent dihydroorotate dehydrogenase | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.78 | OHPLBJKB_03875 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.93 | OHPLBJKB_02721 | | Dihydroorotate dehydrogenase (quinone) | low | > 73 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.78 | GFF820 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.93 | GFF3236 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | low | > 78 |
Escherichia coli ECOR38 | 0.78 | HEPCGN_10510 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.93 | HEPCGN_23225 | pyrD | quinone-dependent dihydroorotate dehydrogenase | low | > 87 |
Erwinia tracheiphila SCR3 | 0.67 | LU632_RS02030 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.83 | LU632_RS09955 | pyrD | quinone-dependent dihydroorotate dehydrogenase | low | > 74 |
Rahnella sp. WP5 | 0.65 | EX31_RS08845 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.87 | EX31_RS18095 | | quinone-dependent dihydroorotate dehydrogenase | low | > 89 |
Pantoea sp. MT58 | 0.64 | IAI47_02565 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.82 | IAI47_12705 | | quinone-dependent dihydroorotate dehydrogenase | low | > 76 |
Dickeya dianthicola 67-19 | 0.64 | HGI48_RS18570 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.85 | HGI48_RS12925 | | quinone-dependent dihydroorotate dehydrogenase | low | > 71 |
Dickeya dianthicola ME23 | 0.63 | DZA65_RS19705 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.85 | DZA65_RS13390 | | quinone-dependent dihydroorotate dehydrogenase | low | > 75 |
Serratia liquefaciens MT49 | 0.63 | IAI46_01600 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.86 | IAI46_08805 | | quinone-dependent dihydroorotate dehydrogenase | low | > 86 |
Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS02560 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.86 | HER17_RS12005 | | quinone-dependent dihydroorotate dehydrogenase | low | > 75 |
Dickeya dadantii 3937 | 0.60 | DDA3937_RS18635 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.85 | DDA3937_RS12855 | | quinone-dependent dihydroorotate dehydrogenase | low | > 74 |
Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_14940 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.71 | CSW01_07490 | | dihydroorotate dehydrogenase (quinone) | low | > 62 |
Alteromonas macleodii MIT1002 | 0.38 | MIT1002_03793 | | Nicotinamide nucleotide repair protein | 0.58 | MIT1002_02035 | | Dihydroorotate dehydrogenase (quinone) | low | > 70 |
Shewanella amazonensis SB2B | 0.36 | Sama_3030 | | YjeF protein (RefSeq) | 0.63 | Sama_1593 | | dihydroorotate dehydrogenase 2 (RefSeq) | low | > 62 |
Shewanella sp. ANA-3 | 0.36 | Shewana3_0592 | | carbohydrate kinase, YjeF related protein (RefSeq) | 0.65 | Shewana3_1786 | | dihydroorotate dehydrogenase 2 (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.36 | SO0598 | yjeF | yjeF protein (NCBI ptt file) | 0.64 | SO2592 | pyrD | dihydroorotate dehydrogenase (NCBI ptt file) | low | > 76 |
Rhodanobacter denitrificans FW104-10B01 | 0.34 | LRK54_RS15135 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.49 | LRK54_RS15985 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Shewanella loihica PV-4 | 0.34 | Shew_0561 | | carbohydrate kinase, YjeF-related protein (RefSeq) | 0.63 | Shew_1810 | | dihydroorotate dehydrogenase 2 (RefSeq) | low | > 60 |
Rhodanobacter denitrificans MT42 | 0.34 | LRK55_RS14850 | | NAD(P)H-hydrate dehydratase | 0.49 | LRK55_RS15740 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Lysobacter sp. OAE881 | 0.34 | ABIE51_RS08050 | | NAD(P)H-hydrate dehydratase | 0.45 | ABIE51_RS13725 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS00840 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.49 | ABZR86_RS07450 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.31 | Xcc-8004.2253.1 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.46 | Xcc-8004.3032.1 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | — | — |
Marinobacter adhaerens HP15 | 0.31 | HP15_2504 | | carbohydrate kinase, YjeF related protein | 0.48 | HP15_1377 | | dihydroorotate dehydrogenase | low | > 73 |
Pseudomonas stutzeri RCH2 | 0.31 | Psest_0678 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.55 | Psest_1947 | | dihydroorotate dehydrogenase, subfamily 2 | low | > 67 |
Pseudomonas fluorescens FW300-N1B4 | 0.31 | Pf1N1B4_1417 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.58 | Pf1N1B4_3842 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | — | — |
Rhodanobacter sp. FW510-T8 | 0.31 | OKGIIK_03905 | | Bifunctional NAD(P)H-hydrate repair enzyme | 0.47 | OKGIIK_09010 | pyrD | quinone-dependent dihydroorotate dehydrogenase | — | — |
Pseudomonas sp. RS175 | 0.30 | PFR28_05116 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.57 | PFR28_01054 | | Dihydroorotate dehydrogenase (quinone) | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.30 | Pf6N2E2_3619 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.57 | Pf6N2E2_2347 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | — | — |
Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_159 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.56 | PfGW456L13_4095 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.30 | AO356_08680 | | carbohydrate kinase | 0.57 | AO356_02610 | | dihydroorotate dehydrogenase (quinone) | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.30 | AO353_13120 | | carbohydrate kinase | 0.57 | AO353_00780 | | dihydroorotate dehydrogenase (quinone) | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.28 | Psyr_0567 | | Protein of unknown function UPF0031:YjeF-related protein, N-terminal | 0.57 | Psyr_2106 | | dihydroorotate oxidase A | — | — |
Pseudomonas sp. S08-1 | 0.28 | OH686_09495 | | NAD(P)H-hydrate epimerase / ADP-dependent (S)-NAD(P)H-hydrate dehydratase | 0.56 | OH686_03120 | | dihydroorotate dehydrogenase (fumarate) | — | — |
Pseudomonas syringae pv. syringae B728a | 0.28 | Psyr_0567 | | Protein of unknown function UPF0031:YjeF-related protein, N-terminal | 0.57 | Psyr_2106 | | dihydroorotate oxidase A | — | — |
Kangiella aquimarina DSM 16071 | 0.27 | B158DRAFT_1947 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.56 | B158DRAFT_2228 | | dihydroorotate oxidase A (EC 1.3.3.1) | — | — |
Burkholderia phytofirmans PsJN | 0.26 | BPHYT_RS09505 | | carbohydrate kinase | 0.57 | BPHYT_RS08565 | | dihydroorotate dehydrogenase | low | > 109 |
Ralstonia sp. UNC404CL21Col | 0.24 | ABZR87_RS12740 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | ABZR87_RS13360 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Ralstonia solanacearum UW163 | 0.24 | UW163_RS14605 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | UW163_RS14880 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.24 | RALBFv3_RS01295 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.55 | RALBFv3_RS01570 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Paraburkholderia graminis OAS925 | 0.24 | ABIE53_002139 | | hydroxyethylthiazole kinase-like uncharacterized protein yjeF | 0.57 | ABIE53_001954 | | dihydroorotate dehydrogenase | — | — |
Herbaspirillum seropedicae SmR1 | 0.23 | HSERO_RS11180 | | sugar kinase | 0.54 | HSERO_RS16155 | | dihydroorotate dehydrogenase | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.23 | H281DRAFT_00907 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.55 | H281DRAFT_00743 | | dihydroorotate oxidase A | — | — |
Ralstonia solanacearum GMI1000 | 0.23 | RS_RS08700 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.54 | RS_RS08160 | | dihydroorotate dehydrogenase (quinone) | — | — |
Ralstonia solanacearum PSI07 | 0.23 | RPSI07_RS16180 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.54 | RPSI07_RS15920 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Paraburkholderia sabiae LMG 24235 | 0.22 | QEN71_RS21930 | | NAD(P)H-hydrate dehydratase | 0.57 | QEN71_RS22765 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Acinetobacter radioresistens SK82 | 0.21 | MPMX26_01782 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.54 | MPMX26_01120 | | Dihydroorotate dehydrogenase (quinone) | — | — |
Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS09070 | | carbohydrate kinase | 0.53 | RR42_RS07465 | | dihydroorotate dehydrogenase | — | — |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.20 | CA264_16280 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.40 | CA264_00865 | | dihydroorotate dehydrogenase (quinone) | low | > 74 |
Castellaniella sp019104865 MT123 | 0.20 | ABCV34_RS02980 | | NAD(P)H-hydrate dehydratase | 0.52 | ABCV34_RS07790 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Bacteroides thetaiotaomicron VPI-5482 | 0.20 | BT4383 | | putative sugar kinase (NCBI ptt file) | 0.26 | BT1009 | | dihydroorotate dehydrogenase (NCBI ptt file) | low | > 81 |
Dechlorosoma suillum PS | 0.20 | Dsui_2898 | | yjeF-like protein, hydroxyethylthiazole kinase-related protein | 0.57 | Dsui_2978 | | dihydroorotate dehydrogenase, subfamily 2 | — | — |
Rhizobium sp. OAE497 | 0.20 | ABIE40_RS09345 | | NAD(P)H-hydrate dehydratase | 0.39 | ABIE40_RS02420 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Bosea sp. OAE506 | 0.19 | ABIE41_RS16885 | | NAD(P)H-hydrate dehydratase | 0.33 | ABIE41_RS24065 | | quinone-dependent dihydroorotate dehydrogenase | low | > 77 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.18 | CA265_RS24885 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.42 | CA265_RS14005 | | dihydroorotate dehydrogenase (quinone) | — | — |
Acidovorax sp. GW101-3H11 | 0.18 | Ac3H11_415 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.52 | Ac3H11_4100 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | — | — |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.18 | Echvi_0073 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.41 | Echvi_1806 | | dihydroorotate dehydrogenase, subfamily 2 | — | — |
Azospirillum sp. SherDot2 | 0.18 | MPMX19_01552 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.38 | MPMX19_02083 | | Dihydroorotate dehydrogenase (quinone) | — | — |
Azospirillum brasilense Sp245 | 0.18 | AZOBR_RS07115 | | hypothetical protein | 0.38 | AZOBR_RS13520 | | dihydroorotate dehydrogenase | low | > 97 |
Variovorax sp. SCN45 | 0.17 | GFF397 | | NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) | 0.50 | GFF960 | | Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) | — | — |
Variovorax sp. OAS795 | 0.17 | ABID97_RS17190 | | NAD(P)H-hydrate dehydratase | 0.50 | ABID97_RS14065 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.17 | ABZR88_RS18865 | | NAD(P)H-hydrate dehydratase | 0.40 | ABZR88_RS12040 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.16 | GFF4918 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.49 | GFF4211 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | low | > 90 |
Rhodopseudomonas palustris CGA009 | 0.15 | TX73_015380 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.38 | TX73_004110 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Sinorhizobium meliloti 1021 | 0.15 | SMc00946 | | hypothetical protein | 0.40 | SMc02245 | | dihydroorotate dehydrogenase 2 | low | > 103 |
Agrobacterium fabrum C58 | 0.15 | Atu1768 | | hypothetical protein | 0.41 | Atu0486 | | dihydroorotate dehydrogenase | low | > 89 |
Dinoroseobacter shibae DFL-12 | 0.14 | Dshi_1837 | | carbohydrate kinase, YjeF related protein (RefSeq) | 0.32 | Dshi_0847 | | Dihydroorotate oxidase (RefSeq) | low | > 64 |
Caulobacter crescentus NA1000 | 0.14 | CCNA_02043 | | sugar kinase | 0.31 | CCNA_00562 | | dihydroorotate dehydrogenase | low | > 66 |
Caulobacter crescentus NA1000 Δfur | 0.14 | CCNA_02043 | | sugar kinase | 0.31 | CCNA_00562 | | dihydroorotate dehydrogenase | low | > 67 |
Sphingomonas koreensis DSMZ 15582 | 0.14 | Ga0059261_0649 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.39 | Ga0059261_1468 | | dihydroorotate oxidase A (EC 1.3.3.1) | — | — |
Phaeobacter inhibens DSM 17395 | 0.13 | PGA1_c18700 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.34 | PGA1_c12150 | | dihydroorotate dehydrogenase PyrD | low | > 62 |
Magnetospirillum magneticum AMB-1 | 0.13 | AMB_RS14075 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.35 | AMB_RS19685 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
Methanococcus maripaludis S2 | 0.12 | MMP_RS01375 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.11 | MMP_RS02330 | | dihydroorotate dehydrogenase | — | — |
Mycobacterium tuberculosis H37Rv | 0.12 | Rv3433c | | Conserved protein | 0.36 | Rv2139 | | Probable dihydroorotate dehydrogenase PyrD | — | — |
Methanococcus maripaludis JJ | 0.12 | MMJJ_RS04000 | | NAD(P)H-hydrate dehydratase | 0.11 | MMJJ_RS02945 | | dihydroorotate dehydrogenase | — | — |
Rhodospirillum rubrum S1H | 0.11 | Rru_A1547 | | hypothetical protein (NCBI) | 0.37 | Rru_A0514 | | Dihydroorotate dehydrogenase 2 (NCBI) | low | > 58 |
Not shown: 6 genomes with orthologs for BWI76_RS02510 only; 6 genomes with orthologs for BWI76_RS09910 only