Conservation of cofitness between BPHYT_RS16835 and BPHYT_RS33840 in Burkholderia phytofirmans PsJN

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16835 glyceraldehyde-3-phosphate dehydrogenase 1.0 BPHYT_RS33840 amidophosphoribosyltransferase 0.82 8
Paraburkholderia graminis OAS925 0.99 ABIE53_003536 glyceraldehyde 3-phosphate dehydrogenase 0.98 ABIE53_004816 amidophosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_06315 glyceraldehyde-3-phosphate dehydrogenase (NAD+) 0.99 H281DRAFT_06060 amidophosphoribosyltransferase 0.41 30
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS27005 type I glyceraldehyde-3-phosphate dehydrogenase 0.91 QEN71_RS17680 amidophosphoribosyltransferase 0.46 94
Herbaspirillum seropedicae SmR1 0.89 HSERO_RS07125 glyceraldehyde-3-phosphate dehydrogenase 0.76 HSERO_RS16445 amidophosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.87 ABCV34_RS15455 type I glyceraldehyde-3-phosphate dehydrogenase 0.65 ABCV34_RS04130 amidophosphoribosyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.76 ABZR86_RS18615 type I glyceraldehyde-3-phosphate dehydrogenase 0.57 ABZR86_RS06775 amidophosphoribosyltransferase 0.75 15
Shewanella sp. ANA-3 0.72 Shewana3_2124 glyceraldehyde-3-phosphate dehydrogenase (RefSeq) 0.58 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) — —
Shewanella loihica PV-4 0.71 Shew_2002 glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) 0.58 Shew_2302 amidophosphoribosyltransferase (RefSeq) — —
Shewanella amazonensis SB2B 0.71 Sama_1808 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (RefSeq) 0.58 Sama_2146 amidophosphoribosyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.71 SO2345 gapA-2 glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) 0.58 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1108 glyceraldehyde-3-phosphate dehydrogenase 0.58 Psyr_1668 amidophosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1108 glyceraldehyde-3-phosphate dehydrogenase 0.58 Psyr_1668 amidophosphoribosyltransferase 0.49 35
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0511 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC 1.2.1.12) 0.61 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS24335 type I glyceraldehyde-3-phosphate dehydrogenase 0.58 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25 0.66 PFLU_RS24335 type I glyceraldehyde-3-phosphate dehydrogenase 0.58 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas simiae WCS417 0.66 PS417_22695 glyceraldehyde-3-phosphate dehydrogenase 0.58 PS417_18535 amidophosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.65 HP15_2175 glyceraldehyde-3-phosphate dehydrogenase, type I 0.60 HP15_1821 amidophosphoribosyltransferase — —
Pseudomonas sp. RS175 0.65 PFR28_00560 Glyceraldehyde-3-phosphate dehydrogenase 1 0.59 PFR28_02811 Amidophosphoribosyltransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_03425 glyceraldehyde-3-phosphate dehydrogenase 0.59 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_1888 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.59 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_2899 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.59 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_05225 glyceraldehyde-3-phosphate dehydrogenase 0.59 AO356_21465 amidophosphoribosyltransferase 0.35 69
Sinorhizobium meliloti 1021 0.62 SMc03979 glyceraldehyde-3-phosphate dehydrogenase 0.27 SMc00554 amidophosphoribosyltransferase 0.87 20
Pseudomonas putida KT2440 0.62 PP_1009 glyceraldehyde-3-phosphate dehydrogenase 0.58 PP_2000 amidophosphoribosyl transferase low > 96
Rhodopseudomonas palustris CGA009 0.61 TX73_004865 type I glyceraldehyde-3-phosphate dehydrogenase 0.30 TX73_015990 amidophosphoribosyltransferase — —
Rhodospirillum rubrum S1H 0.61 Rru_A0222 Glyceraldehyde-3-phosphate dehydrogenase, type I (NCBI) 0.28 Rru_A0404 Amidophosphoribosyl transferase (NCBI) — —
Agrobacterium fabrum C58 0.61 Atu3737 glyceraldehyde 3-phosphate dehydrogenase 0.27 Atu1075 amidophosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_0730 glyceraldehyde-3-phosphate dehydrogenase, type I 0.27 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Rhizobium sp. OAE497 0.60 ABIE40_RS15870 type I glyceraldehyde-3-phosphate dehydrogenase 0.27 ABIE40_RS06270 amidophosphoribosyltransferase — —
Azospirillum brasilense Sp245 0.59 AZOBR_RS10375 glyceraldehyde-3-phosphate dehydrogenase 0.28 AZOBR_RS08310 amidophosphoribosyltransferase low > 97
Dinoroseobacter shibae DFL-12 0.59 Dshi_1742 glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) 0.28 Dshi_2132 amidophosphoribosyltransferase (RefSeq) — —
Azospirillum sp. SherDot2 0.59 MPMX19_02850 Glyceraldehyde-3-phosphate dehydrogenase 1 0.29 MPMX19_00906 Amidophosphoribosyltransferase low > 112
Dechlorosoma suillum PS 0.58 Dsui_1560 glyceraldehyde-3-phosphate dehydrogenase, type I 0.68 Dsui_3186 amidophosphoribosyltransferase — —
Bosea sp. OAE506 0.58 ABIE41_RS09420 type I glyceraldehyde-3-phosphate dehydrogenase 0.28 ABIE41_RS17810 amidophosphoribosyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS10040 type I glyceraldehyde-3-phosphate dehydrogenase 0.28 A4249_RS03735 amidophosphoribosyltransferase — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c27490 glyceraldehyde-3-phosphate dehydrogenase Gap 0.28 PGA1_c10810 amidophosphoribosyltransferase PurF — —
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_03358 glyceraldehyde 3-phosphate dehydrogenase 0.29 CCNA_01730 amidophosphoribosyltransferase low > 67
Caulobacter crescentus NA1000 0.56 CCNA_03358 glyceraldehyde 3-phosphate dehydrogenase 0.29 CCNA_01730 amidophosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF3022 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) 0.55 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Escherichia coli ECRC100 0.55 OKFHMN_19385 epd erythrose-4-phosphate dehydrogenase 0.55 OKFHMN_22715 purF amidophosphoribosyltransferase low > 80
Escherichia coli ECRC62 0.55 BNILDI_09835 epd erythrose-4-phosphate dehydrogenase 0.55 BNILDI_13255 purF amidophosphoribosyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00789 D-erythrose-4-phosphate dehydrogenase 0.55 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 73
Escherichia coli Nissle 1917 0.55 ECOLIN_RS16265 erythrose-4-phosphate dehydrogenase 0.55 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Escherichia coli ECRC102 0.55 NIAGMN_17150 epd erythrose-4-phosphate dehydrogenase 0.55 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Escherichia coli BW25113 0.55 b2927 epd D-erythrose 4-phosphate dehydrogenase (NCBI) 0.55 b2312 purF amidophosphoribosyltransferase (NCBI) 0.28 57
Escherichia coli ECRC99 0.55 KEDOAH_08755 epd erythrose-4-phosphate dehydrogenase 0.55 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli BL21 0.55 ECD_02758 D-erythrose 4-phosphate dehydrogenase 0.55 ECD_02237 amidophosphoribosyltransferase low > 61
Escherichia coli ECRC98 0.55 JDDGAC_23015 epd erythrose-4-phosphate dehydrogenase 0.55 JDDGAC_26675 purF amidophosphoribosyltransferase low > 86
Escherichia coli ECOR27 0.55 NOLOHH_11295 epd erythrose-4-phosphate dehydrogenase 0.55 NOLOHH_14335 purF amidophosphoribosyltransferase low > 75
Escherichia coli ECRC101 0.55 MCAODC_09905 epd erythrose-4-phosphate dehydrogenase 0.55 MCAODC_13755 purF amidophosphoribosyltransferase low > 87
Pantoea sp. MT58 0.55 IAI47_03685 erythrose-4-phosphate dehydrogenase 0.55 IAI47_06275 amidophosphoribosyltransferase low > 76
Escherichia fergusonii Becca 0.54 EFB2_00979 D-erythrose-4-phosphate dehydrogenase 0.55 EFB2_01546 Amidophosphoribosyltransferase low > 86
Escherichia coli ECOR38 0.54 HEPCGN_18695 epd erythrose-4-phosphate dehydrogenase 0.55 HEPCGN_21910 purF amidophosphoribosyltransferase low > 87
Fusobacterium nucleatum SB010 0.54 HUW76_06235 type I glyceraldehyde-3-phosphate dehydrogenase 0.23 HUW76_05170 amidophosphoribosyltransferase — —
Klebsiella michiganensis M5al 0.54 BWI76_RS23985 erythrose-4-phosphate dehydrogenase 0.55 BWI76_RS20350 amidophosphoribosyltransferase low > 92
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2973 erythrose-4-phosphate dehydrogenase 0.55 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) 0.61 11
Pseudomonas stutzeri RCH2 0.53 Psest_3784 glyceraldehyde-3-phosphate dehydrogenase, type I 0.58 Psest_2579 amidophosphoribosyltransferase low > 67
Enterobacter sp. TBS_079 0.53 MPMX20_03779 D-erythrose-4-phosphate dehydrogenase 0.55 MPMX20_03247 Amidophosphoribosyltransferase low > 85
Serratia liquefaciens MT49 0.53 IAI46_21015 erythrose-4-phosphate dehydrogenase 0.56 IAI46_17810 amidophosphoribosyltransferase low > 86
Rahnella sp. WP5 0.52 EX31_RS21405 erythrose-4-phosphate dehydrogenase 0.54 EX31_RS19570 amidophosphoribosyltransferase low > 89
Pectobacterium carotovorum WPP14 0.52 HER17_RS02685 erythrose-4-phosphate dehydrogenase 0.55 HER17_RS07020 amidophosphoribosyltransferase 0.54 56
Mycobacterium tuberculosis H37Rv 0.52 Rv1436 Probable glyceraldehyde 3-phosphate dehydrogenase Gap (GAPDH) 0.27 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) — —
Erwinia tracheiphila SCR3 0.52 LU632_RS05535 epd erythrose-4-phosphate dehydrogenase 0.55 LU632_RS07865 purF amidophosphoribosyltransferase low > 74
Dickeya dianthicola ME23 0.51 DZA65_RS19580 erythrose-4-phosphate dehydrogenase 0.55 DZA65_RS15335 amidophosphoribosyltransferase low > 75
Dickeya dadantii 3937 0.51 DDA3937_RS18520 erythrose-4-phosphate dehydrogenase 0.55 DDA3937_RS14435 amidophosphoribosyltransferase low > 74
Dickeya dianthicola 67-19 0.51 HGI48_RS18445 erythrose-4-phosphate dehydrogenase 0.55 HGI48_RS14405 amidophosphoribosyltransferase low > 71
Pseudomonas sp. S08-1 0.51 OH686_10765 erythrose-4-phosphate dehydrogenase 0.61 OH686_04420 amidophosphoribosyltransferase — —
Alteromonas macleodii MIT1002 0.51 MIT1002_00862 D-erythrose-4-phosphate dehydrogenase 0.60 MIT1002_02524 Amidophosphoribosyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_02530 D-erythrose-4-phosphate dehydrogenase 0.58 CSW01_05115 amidophosphoribosyltransferase low > 62
Acinetobacter radioresistens SK82 0.50 MPMX26_01087 D-erythrose-4-phosphate dehydrogenase 0.58 MPMX26_01122 Amidophosphoribosyltransferase low > 36
Variovorax sp. SCN45 0.49 GFF7175 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.64 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS11435 type I glyceraldehyde-3-phosphate dehydrogenase 0.79 RPSI07_RS14765 amidophosphoribosyltransferase — —
Variovorax sp. OAS795 0.49 ABID97_RS02440 type I glyceraldehyde-3-phosphate dehydrogenase 0.63 ABID97_RS21635 amidophosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.49 RS_RS13755 aldehyde dehydrogenase 0.78 RS_RS09930 amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.49 UW163_RS07760 type I glyceraldehyde-3-phosphate dehydrogenase 0.78 UW163_RS11175 amidophosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS05865 type I glyceraldehyde-3-phosphate dehydrogenase 0.78 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.49 DVU0565 gap-1 glyceraldehyde 3-phosphate dehydrogenase (TIGR) 0.29 DVU0161 purF amidophosphoribosyltransferase (TIGR) — —
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS05785 type I glyceraldehyde-3-phosphate dehydrogenase 0.55 LRK54_RS01340 amidophosphoribosyltransferase low > 59
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS01435 type I glyceraldehyde-3-phosphate dehydrogenase 0.77 ABZR87_RS14465 amidophosphoribosyltransferase — —
Rhodanobacter denitrificans MT42 0.49 LRK55_RS05540 type I glyceraldehyde-3-phosphate dehydrogenase 0.55 LRK55_RS01105 amidophosphoribosyltransferase low > 63
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS17570 glyceraldehyde-3-phosphate dehydrogenase 0.80 RR42_RS14325 amidophosphoribosyltransferase — —
Lysobacter sp. OAE881 0.47 ABIE51_RS17095 type I glyceraldehyde-3-phosphate dehydrogenase 0.53 ABIE51_RS06180 amidophosphoribosyltransferase low > 62
Synechococcus elongatus PCC 7942 0.47 Synpcc7942_1742 gap2 glyceraldehyde-3-phosphate dehydrogenase 0.29 Synpcc7942_0004 purF amidophosphoribosyltransferase — —
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_01060 gap type I glyceraldehyde-3-phosphate dehydrogenase 0.56 OKGIIK_05570 purF amidophosphoribosyltransferase 0.82 9
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1236.1 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.54 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 74
Acidovorax sp. GW101-3H11 0.46 Ac3H11_648 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.64 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Desulfovibrio vulgaris Miyazaki F 0.46 DvMF_1440 glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) 0.28 DvMF_2307 amidophosphoribosyltransferase (RefSeq) low > 51
Magnetospirillum magneticum AMB-1 0.44 AMB_RS02635 type I glyceraldehyde-3-phosphate dehydrogenase 0.28 AMB_RS10545 amidophosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1114 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.65 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Bifidobacterium breve UCC2003 0.38 BBR_RS16790 type I glyceraldehyde-3-phosphate dehydrogenase 0.27 BBR_RS13380 amidophosphoribosyltransferase — —

Not shown: 11 genomes with orthologs for BPHYT_RS16835 only; 2 genomes with orthologs for BPHYT_RS33840 only