Conservation of cofitness between Atu2650 and Atu1141 in Agrobacterium fabrum C58

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2650 glycerol-3-phosphate dehydrogenase 1.0 Atu1141 Phosphoribosylglycinamide synthetase 0.87 11
Rhizobium sp. OAE497 0.72 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.91 ABIE40_RS06560 phosphoribosylformylglycinamidine cyclo-ligase 0.74 21
Sinorhizobium meliloti 1021 0.64 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.85 SMc00615 phosphoribosylaminoimidazole synthetase 0.79 11
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS15450 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.59 A4249_RS08210 phosphoribosylformylglycinamidine cyclo-ligase — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase 0.58 B158DRAFT_2385 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Serratia liquefaciens MT49 0.38 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.52 IAI46_18885 phosphoribosylformylglycinamidine cyclo-ligase low > 86
Pantoea sp. MT58 0.38 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 IAI47_05180 phosphoribosylformylglycinamidine cyclo-ligase — —
Dinoroseobacter shibae DFL-12 0.38 Dshi_3414 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein (RefSeq) 0.60 Dshi_1889 phosphoribosylformylglycinamidine cyclo-ligase (RefSeq) 0.76 9
Rhodospirillum rubrum S1H 0.38 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.60 Rru_A2167 Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) low > 58
Phaeobacter inhibens DSM 17395 0.38 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA 0.63 PGA1_c13260 phosphoribosylformylglycinamidine cyclo-ligase PurM 0.86 26
Erwinia tracheiphila SCR3 0.38 LU632_RS21875 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 LU632_RS08275 purM phosphoribosylformylglycinamidine cyclo-ligase 0.79 4
Rahnella sp. WP5 0.38 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 EX31_RS22695 phosphoribosylformylglycinamidine cyclo-ligase 0.70 65
Dickeya dadantii 3937 0.37 DDA3937_RS20405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.54 DDA3937_RS06025 phosphoribosylformylglycinamidine cyclo-ligase — —
Azospirillum sp. SherDot2 0.37 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.61 MPMX19_01304 Phosphoribosylformylglycinamidine cyclo-ligase 0.71 20
Pectobacterium carotovorum WPP14 0.37 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 HER17_RS15465 phosphoribosylformylglycinamidine cyclo-ligase low > 75
Dickeya dianthicola 67-19 0.37 HGI48_RS00795 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 HGI48_RS06070 phosphoribosylformylglycinamidine cyclo-ligase low > 71
Dickeya dianthicola ME23 0.37 DZA65_RS00850 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 DZA65_RS06420 phosphoribosylformylglycinamidine cyclo-ligase — —
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.58 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase — —
Caulobacter crescentus NA1000 0.37 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.58 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 ECOLIN_RS14190 phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC101 0.36 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 MCAODC_12340 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC101 0.36 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 OKFHMN_21810 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC99 0.36 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 KEDOAH_06410 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF402 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.53 GFF2169 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.53 OHPLBJKB_01227 Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC98 0.36 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 JDDGAC_25755 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia fergusonii Becca 0.36 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.53 EFB2_01399 Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC102 0.36 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 NIAGMN_19580 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli BL21 0.36 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) 0.53 ECD_02391 phosphoribosylaminoimidazole synthetase — —
Escherichia coli BW25113 0.36 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) 0.53 b2499 purM phosphoribosylaminoimidazole synthetase (NCBI) — —
Escherichia coli ECRC62 0.36 BNILDI_03880 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 BNILDI_12270 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECOR38 0.36 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 HEPCGN_20975 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECOR27 0.36 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 NOLOHH_13460 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Enterobacter asburiae PDN3 0.36 EX28DRAFT_3859 Glycerol-3-phosphate dehydrogenase 0.54 EX28DRAFT_0168 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Klebsiella michiganensis M5al 0.36 BWI76_RS27210 glycerol-3-phosphate dehydrogenase 0.53 BWI76_RS20965 phosphoribosylformylglycinamidine cyclo-ligase — —
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.51 CSW01_11350 phosphoribosylformylglycinamidine cyclo-ligase — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase 0.61 AZOBR_RS16290 phosphoribosylaminoimidazole synthetase 0.65 28
Enterobacter sp. TBS_079 0.36 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.53 MPMX20_03354 Phosphoribosylformylglycinamidine cyclo-ligase — —
Shewanella loihica PV-4 0.36 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.50 Shew_1513 phosphoribosylaminoimidazole synthetase (RefSeq) — —
Shewanella amazonensis SB2B 0.36 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.52 Sama_2097 phosphoribosylaminoimidazole synthetase (RefSeq) — —
Lysobacter sp. OAE881 0.35 ABIE51_RS00495 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.47 ABIE51_RS15890 phosphoribosylformylglycinamidine cyclo-ligase — —
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_13015 gpsA glycerol-3-phosphate dehydrogenase 0.44 OKGIIK_02315 purM phosphoribosylformylglycinamidine cyclo-ligase — —
Alteromonas macleodii MIT1002 0.35 MIT1002_00485 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.52 MIT1002_02219 Phosphoribosylformylglycinamidine cyclo-ligase low > 70
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.271.1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.47 Xcc-8004.1676.1 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.63 27
Shewanella sp. ANA-3 0.35 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.52 Shewana3_2545 phosphoribosylaminoimidazole synthetase (RefSeq) — —
Shewanella oneidensis MR-1 0.35 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) 0.52 SO2760 purM phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) — —
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_2234 Glycerol-3-phosphate dehydrogenase 0.58 Ga0059261_0228 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Bosea sp. OAE506 0.35 ABIE41_RS05655 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.70 ABIE41_RS17040 phosphoribosylformylglycinamidine cyclo-ligase 0.71 9
Fusobacterium nucleatum SB010 0.34 HUW76_05650 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.41 HUW76_05175 phosphoribosylformylglycinamidine cyclo-ligase — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS13250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.45 ABZR86_RS19865 phosphoribosylformylglycinamidine cyclo-ligase — —
Rhodopseudomonas palustris CGA009 0.34 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.68 TX73_015785 phosphoribosylformylglycinamidine cyclo-ligase — —
Rhodanobacter denitrificans MT42 0.33 LRK55_RS10550 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.45 LRK55_RS12645 phosphoribosylformylglycinamidine cyclo-ligase — —
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS10860 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.45 LRK54_RS12945 phosphoribosylformylglycinamidine cyclo-ligase — —
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU3159 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (TIGR) 0.46 DVU1406 purM phosphoribosylformylglycinamidine cyclo-ligase (TIGR) — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.48 H281DRAFT_04710 phosphoribosylformylglycinamidine cyclo-ligase low > 103
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS00795 glycerol-3-phosphate dehydrogenase 0.52 HSERO_RS03165 phosphoribosylaminoimidazole synthetase — —
Castellaniella sp019104865 MT123 0.31 ABCV34_RS14250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.52 ABCV34_RS08795 phosphoribosylformylglycinamidine cyclo-ligase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.50 GFF3433 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Marinobacter adhaerens HP15 0.31 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 HP15_1299 phosphoribosylaminoimidazole synthetase — —
Pseudomonas stutzeri RCH2 0.30 Psest_2471 Glycerol-3-phosphate dehydrogenase 0.52 Psest_1474 phosphoribosylaminoimidazole synthetase — —
Acidovorax sp. GW101-3H11 0.30 Ac3H11_3860 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.51 Ac3H11_1318 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Ralstonia solanacearum GMI1000 0.30 RS_RS01760 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.49 RS_RS13145 phosphoribosylformylglycinamidine cyclo-ligase — —
Paraburkholderia graminis OAS925 0.29 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.48 ABIE53_000874 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum UW163 0.29 UW163_RS02660 glycerol-3-phosphate dehydrogenase 0.49 UW163_RS08345 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.53 Pf6N2E2_5729 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_19795 glycerol-3-phosphate dehydrogenase 0.53 AO356_19090 phosphoribosylaminoimidazole synthetase 0.67 48
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS10920 glycerol-3-phosphate dehydrogenase 0.49 RALBFv3_RS05280 phosphoribosylformylglycinamidine cyclo-ligase — —
Variovorax sp. OAS795 0.29 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 ABID97_RS08700 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas sp. RS175 0.29 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.52 PFR28_03217 Phosphoribosylformylglycinamidine cyclo-ligase — —
Variovorax sp. SCN45 0.29 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.50 GFF3941 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.84 102
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_01735 glycerol-3-phosphate dehydrogenase 0.52 AO353_02680 phosphoribosylaminoimidazole synthetase — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Mycobacterium tuberculosis H37Rv 0.28 Rv2982c Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA2 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) 0.37 Rv0809 Probable phosphoribosylformylglycinamidine CYCLO-ligase PurM (AIRS) (phosphoribosyl-aminoimidazole synthetase) (air synthase) — —
Pseudomonas fluorescens SBW25 0.28 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.53 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.53 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas simiae WCS417 0.28 PS417_09000 glycerol-3-phosphate dehydrogenase 0.53 PS417_20120 phosphoribosylaminoimidazole synthetase — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.53 PfGW456L13_4252 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS06770 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 ABZR87_RS00915 phosphoribosylformylglycinamidine cyclo-ligase — —
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.48 BPHYT_RS03640 phosphoribosylformylglycinamidine cyclo-ligase 0.55 80
Pseudomonas putida KT2440 0.28 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.51 PP_1665 Phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS22390 glycerol-3-phosphate dehydrogenase 0.50 RPSI07_RS12020 phosphoribosylformylglycinamidine cyclo-ligase — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 QEN71_RS26445 phosphoribosylformylglycinamidine cyclo-ligase 0.79 31
Dechlorosoma suillum PS 0.27 Dsui_1277 glycerol-3-phosphate dehydrogenase 0.53 Dsui_1519 phosphoribosylaminoimidazole synthetase — —
Acinetobacter radioresistens SK82 0.26 MPMX26_01116 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.48 MPMX26_02206 Phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas sp. S08-1 0.26 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.52 OH686_18995 Phosphoribosylformylglycinamidine cyclo-ligase — —
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.52 RR42_RS17220 phosphoribosylaminoimidazole synthetase — —
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_3518 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.52 Pf1N1B4_3698 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Bifidobacterium breve UCC2003 0.25 BBR_RS12080 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.44 BBR_RS13375 phosphoribosylformylglycinamidine cyclo-ligase — —
Synechococcus elongatus PCC 7942 0.25 Synpcc7942_2522 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.50 Synpcc7942_0851 purM phosphoribosylaminoimidazole synthetase — —

Not shown: 10 genomes with orthologs for Atu2650 only; 4 genomes with orthologs for Atu1141 only