| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dinoroseobacter shibae DFL-12 | 1.0 | Dshi_0083 | | 3-isopropylmalate dehydratase, small subunit (RefSeq) | 1.0 | Dshi_3062 | | argininosuccinate lyase (RefSeq) | 0.70 | 11 |
| Rhodospirillum rubrum S1H | 0.80 | Rru_A1190 | | 3-isopropylmalate dehydratase small subunit region (NCBI) | 0.65 | Rru_A0397 | | Argininosuccinate lyase (NCBI) | 0.78 | 3 |
| Azospirillum sp. SherDot2 | 0.80 | MPMX19_00606 | | 3-isopropylmalate dehydratase small subunit 1 | 0.66 | MPMX19_05817 | | Argininosuccinate lyase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.79 | AMB_RS20565 | | 3-isopropylmalate dehydratase small subunit | 0.65 | AMB_RS22715 | | argininosuccinate lyase | — | — |
| Sinorhizobium meliloti 1021 | 0.79 | SMc03795 | | isopropylmalate isomerase small subunit | 0.68 | SMc00725 | | argininosuccinate lyase | low | > 103 |
| Rhizobium sp. OAE497 | 0.79 | ABIE40_RS19040 | | 3-isopropylmalate dehydratase small subunit | 0.69 | ABIE40_RS17520 | | argininosuccinate lyase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.78 | PGA1_c29790 | | 3-isopropylmalate dehydratase small subunit | 0.84 | PGA1_c03450 | | argininosuccinate lyase ArgH | — | — |
| Azospirillum brasilense Sp245 | 0.77 | AZOBR_RS14135 | | isopropylmalate isomerase | 0.69 | AZOBR_RS16935 | | argininosuccinate lyase | — | — |
| Agrobacterium fabrum C58 | 0.77 | Atu2790 | | 3-isopropylmalate dehydratase, small subunit | 0.69 | Atu3599 | | argininosuccinate lyase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.75 | TX73_001215 | | 3-isopropylmalate dehydratase small subunit | 0.64 | TX73_024645 | | argininosuccinate lyase | — | — |
| Bosea sp. OAE506 | 0.74 | ABIE41_RS11640 | | 3-isopropylmalate dehydratase small subunit | 0.66 | ABIE41_RS08750 | | argininosuccinate lyase | — | — |
| Acinetobacter radioresistens SK82 | 0.61 | MPMX26_00346 | | 3-isopropylmalate dehydratase small subunit 1 | 0.52 | MPMX26_00185 | | Argininosuccinate lyase | 0.90 | 27 |
| Pseudomonas stutzeri RCH2 | 0.60 | Psest_2590 | | 3-isopropylmalate dehydratase, small subunit | 0.54 | Psest_3751 | | argininosuccinate lyase | — | — |
| Marinobacter adhaerens HP15 | 0.60 | HP15_1833 | | isopropylmalate isomerase small subunit | 0.55 | HP15_243 | | argininosuccinate lyase | — | — |
| Pseudomonas putida KT2440 | 0.59 | PP_1986 | | 3-isopropylmalate dehydratase small subunit | 0.55 | PP_0184 | | Argininosuccinate lyase | 0.76 | 32 |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS11110 | | 3-isopropylmalate dehydratase small subunit | 0.50 | UW163_RS09390 | | argininosuccinate lyase | — | — |
| Variovorax sp. OAS795 | 0.59 | ABID97_RS08460 | | 3-isopropylmalate dehydratase small subunit | 0.52 | ABID97_RS08190 | | argininosuccinate lyase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS02615 | | 3-isopropylmalate dehydratase small subunit | 0.50 | RALBFv3_RS04280 | | argininosuccinate lyase | — | — |
| Pseudomonas sp. S08-1 | 0.59 | OH686_04475 | | 3-isopropylmalate dehydratase small subunit | 0.55 | OH686_13885 | | argininosuccinate lyase | 0.59 | 57 |
| Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_3947 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.55 | PfGW456L13_854 | | Argininosuccinate lyase (EC 4.3.2.1) | 0.80 | 48 |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_14 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.55 | Pf1N1B4_2183 | | Argininosuccinate lyase (EC 4.3.2.1) | — | — |
| Pseudomonas sp. RS175 | 0.59 | PFR28_02823 | | 3-isopropylmalate dehydratase small subunit 1 | 0.55 | PFR28_04367 | | Argininosuccinate lyase | — | — |
| Dechlorosoma suillum PS | 0.59 | Dsui_3199 | | 3-isopropylmalate dehydratase, small subunit | 0.51 | Dsui_0111 | | argininosuccinate lyase | — | — |
| Pseudomonas simiae WCS417 | 0.59 | PS417_18595 | | 3-isopropylmalate dehydratase | 0.55 | PS417_27540 | | argininosuccinate lyase | — | — |
| Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS33905 | | 3-isopropylmalate dehydratase small subunit | 0.51 | BPHYT_RS05210 | | argininosuccinate lyase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.58 | AO353_20625 | | 3-isopropylmalate dehydratase | 0.55 | AO353_09000 | | argininosuccinate lyase | 0.71 | 48 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS14700 | | 3-isopropylmalate dehydratase small subunit | 0.49 | RPSI07_RS13080 | | argininosuccinate lyase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.58 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.66 | CCNA_02294 | | argininosuccinate lyase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.55 | Psyr_0065 | | argininosuccinate lyase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.55 | Psyr_0065 | | argininosuccinate lyase | — | — |
| Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.55 | PFLU_RS29220 | | argininosuccinate lyase | — | — |
| Caulobacter crescentus NA1000 | 0.58 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.66 | CCNA_02294 | | argininosuccinate lyase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.55 | PFLU_RS29220 | | argininosuccinate lyase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.58 | H281DRAFT_06073 | | 3-isopropylmalate dehydratase, small subunit | 0.51 | H281DRAFT_00194 | | argininosuccinate lyase | low | > 103 |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS09995 | | 3-isopropylmalate dehydratase small subunit | 0.48 | RS_RS11865 | | argininosuccinate lyase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.58 | ABZR87_RS14535 | | 3-isopropylmalate dehydratase small subunit | 0.49 | ABZR87_RS16170 | | argininosuccinate lyase | 0.77 | 33 |
| Kangiella aquimarina DSM 16071 | 0.58 | B158DRAFT_1320 | | 3-isopropylmalate dehydratase, small subunit | 0.22 | B158DRAFT_1980 | | argininosuccinate lyase | low | > 40 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_64 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.55 | Pf6N2E2_4429 | | Argininosuccinate lyase (EC 4.3.2.1) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF3361 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.51 | GFF736 | | Argininosuccinate lyase (EC 4.3.2.1) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS17615 | | 3-isopropylmalate dehydratase small subunit | 0.50 | QEN71_RS24970 | | argininosuccinate lyase | 0.83 | 9 |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_21405 | | 3-isopropylmalate dehydratase | 0.55 | AO356_12780 | | argininosuccinate lyase | 0.88 | 26 |
| Variovorax sp. SCN45 | 0.58 | GFF3889 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.52 | GFF3824 | | Argininosuccinate lyase (EC 4.3.2.1) | — | — |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_1527 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.52 | Ac3H11_1632 | | Argininosuccinate lyase (EC 4.3.2.1) | — | — |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_004803 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit | 0.50 | ABIE53_001311 | | argininosuccinate lyase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.56 | Xcc-8004.1050.1 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.19 | Xcc-8004.2323.1 | | Argininosuccinate lyase (EC 4.3.2.1) | 0.75 | 38 |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS16505 | | 3-isopropylmalate dehydratase small subunit | 0.50 | HSERO_RS14685 | | argininosuccinate lyase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.55 | RR42_RS14390 | | 3-isopropylmalate dehydratase | 0.49 | RR42_RS15925 | | argininosuccinate lyase | — | — |
| Castellaniella sp019104865 MT123 | 0.54 | ABCV34_RS04285 | | 3-isopropylmalate dehydratase small subunit | 0.52 | ABCV34_RS03060 | | argininosuccinate lyase | — | — |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS19215 | | 3-isopropylmalate dehydratase small subunit | 0.42 | DZA65_RS00945 | | argininosuccinate lyase | 0.66 | 59 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS18130 | | 3-isopropylmalate dehydratase small subunit | 0.42 | DDA3937_RS20340 | | argininosuccinate lyase | 0.61 | 73 |
| Serratia liquefaciens MT49 | 0.53 | IAI46_03340 | | 3-isopropylmalate dehydratase small subunit | 0.44 | IAI46_24500 | | argininosuccinate lyase | 0.37 | 58 |
| Dickeya dianthicola 67-19 | 0.53 | HGI48_RS18070 | | 3-isopropylmalate dehydratase small subunit | 0.42 | HGI48_RS00885 | | argininosuccinate lyase | 0.76 | 20 |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_12610 | | 3-isopropylmalate dehydratase small subunit | 0.41 | CSW01_13360 | | argininosuccinate lyase | low | > 62 |
| Pantoea sp. MT58 | 0.52 | IAI47_16015 | | 3-isopropylmalate dehydratase small subunit | 0.42 | IAI47_00920 | | argininosuccinate lyase | 0.96 | 10 |
| Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS03070 | | 3-isopropylmalate dehydratase small subunit | 0.42 | HER17_RS20620 | | argininosuccinate lyase | low | > 75 |
| Shewanella loihica PV-4 | 0.51 | Shew_3469 | | isopropylmalate isomerase small subunit (RefSeq) | 0.40 | Shew_0206 | | argininosuccinate lyase (RefSeq) | 0.97 | 17 |
| Klebsiella michiganensis M5al | 0.51 | BWI76_RS04665 | | 3-isopropylmalate dehydratase small subunit | 0.43 | BWI76_RS00855 | | argininosuccinate lyase | 0.93 | 17 |
| Shewanella oneidensis MR-1 | 0.51 | SO4233 | leuD | 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) | 0.40 | SO0279 | argH | argininosuccinate lyase (NCBI ptt file) | 0.95 | 26 |
| Erwinia tracheiphila SCR3 | 0.50 | LU632_RS02865 | leuD | 3-isopropylmalate dehydratase small subunit | 0.43 | LU632_RS19600 | argH | argininosuccinate lyase | 0.81 | 11 |
| Escherichia coli BL21 | 0.50 | ECD_00073 | | 3-isopropylmalate dehydratase small subunit | 0.42 | ECD_03845 | | argininosuccinate lyase | low | > 60 |
| Escherichia coli BW25113 | 0.50 | b0071 | leuD | isopropylmalate isomerase small subunit (NCBI) | 0.42 | b3960 | argH | argininosuccinate lyase (NCBI) | 0.90 | 37 |
| Escherichia coli ECRC62 | 0.50 | BNILDI_08535 | leuD | 3-isopropylmalate dehydratase small subunit | 0.42 | BNILDI_05805 | argH | argininosuccinate lyase | — | — |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_3667 | | 3-isopropylmalate dehydratase, small subunit | 0.42 | EX28DRAFT_4422 | | argininosuccinate lyase | 0.78 | 19 |
| Shewanella sp. ANA-3 | 0.50 | Shewana3_3758 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.40 | Shewana3_3901 | | argininosuccinate lyase (RefSeq) | 0.86 | 68 |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_03075 | leuD | 3-isopropylmalate dehydratase small subunit | 0.42 | NOLOHH_05720 | argH | argininosuccinate lyase | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_03586 | | 3-isopropylmalate dehydratase small subunit | 0.42 | OHPLBJKB_04090 | | Argininosuccinate lyase | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF167 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.42 | GFF2346 | | Argininosuccinate lyase (EC 4.3.2.1) | low | > 78 |
| Shewanella amazonensis SB2B | 0.50 | Sama_0338 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.43 | Sama_0260 | | argininosuccinate lyase (RefSeq) | 0.93 | 31 |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_14325 | leuD | 3-isopropylmalate dehydratase small subunit | 0.42 | JDDGAC_17200 | argH | argininosuccinate lyase | — | — |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_17425 | leuD | 3-isopropylmalate dehydratase small subunit | 0.42 | KEDOAH_14585 | argH | argininosuccinate lyase | — | — |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_08710 | leuD | 3-isopropylmalate dehydratase small subunit | 0.42 | HEPCGN_12220 | argH | argininosuccinate lyase | low | > 85 |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS00385 | | 3-isopropylmalate dehydratase small subunit | 0.42 | ECOLIN_RS22855 | | argininosuccinate lyase | low | > 52 |
| Escherichia coli ECRC101 | 0.50 | MCAODC_01245 | leuD | 3-isopropylmalate dehydratase small subunit | 0.42 | MCAODC_04075 | argH | argininosuccinate lyase | — | — |
| Escherichia coli ECRC101 | 0.50 | OKFHMN_10730 | leuD | 3-isopropylmalate dehydratase small subunit | 0.42 | OKFHMN_13575 | argH | argininosuccinate lyase | — | — |
| Escherichia fergusonii Becca | 0.50 | EFB2_03974 | | 3-isopropylmalate dehydratase small subunit | 0.42 | EFB2_04654 | | Argininosuccinate lyase | low | > 86 |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_08580 | leuD | 3-isopropylmalate dehydratase small subunit | 0.42 | NIAGMN_11325 | argH | argininosuccinate lyase | — | — |
| Rahnella sp. WP5 | 0.50 | EX31_RS03695 | | 3-isopropylmalate dehydratase small subunit | 0.43 | EX31_RS14180 | | argininosuccinate lyase | 0.97 | 5 |
| Enterobacter sp. TBS_079 | 0.49 | MPMX20_00766 | | 3-isopropylmalate dehydratase small subunit 1 | 0.42 | MPMX20_04520 | | Argininosuccinate lyase | 0.83 | 43 |
| Sphingomonas koreensis DSMZ 15582 | 0.46 | Ga0059261_4225 | | 3-isopropylmalate dehydratase, small subunit | 0.56 | Ga0059261_2049 | | argininosuccinate lyase | 0.96 | 23 |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_00946 | | 3-isopropylmalate dehydratase small subunit 1 | 0.44 | MIT1002_00467 | | Argininosuccinate lyase | 0.93 | 38 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.45 | CA264_09440 | | 3-isopropylmalate dehydratase small subunit | 0.23 | CA264_06225 | | argininosuccinate lyase | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.43 | ABZR86_RS15955 | | 3-isopropylmalate dehydratase small subunit | 0.20 | ABZR86_RS08695 | | arginosuccinate lyase (EC 4.3.2.1) (from data) | 0.90 | 40 |
| Bacteroides stercoris CC31F | 0.43 | HMPREF1181_RS14140 | | 3-isopropylmalate dehydratase small subunit | 0.22 | HMPREF1181_RS03410 | | argininosuccinate lyase | 0.85 | 27 |
| Rhodanobacter denitrificans MT42 | 0.43 | LRK55_RS09970 | | 3-isopropylmalate dehydratase small subunit | 0.19 | LRK55_RS02135 | | argininosuccinate lyase | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_13590 | leuD | 3-isopropylmalate dehydratase small subunit | 0.19 | OKGIIK_09430 | argH | argininosuccinate lyase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS10330 | | 3-isopropylmalate dehydratase small subunit | 0.19 | LRK54_RS02380 | | argininosuccinate lyase | low | > 59 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.42 | ABZR88_RS11600 | | 3-isopropylmalate dehydratase small subunit | 0.23 | ABZR88_RS12070 | | argininosuccinate lyase | — | — |
| Bifidobacterium breve UCC2003 | 0.40 | BBR_RS19625 | | 3-isopropylmalate dehydratase small subunit | 0.38 | BBR_RS13955 | | argininosuccinate lyase | low | > 34 |
| Lysobacter sp. OAE881 | 0.40 | ABIE51_RS17580 | | 3-isopropylmalate dehydratase small subunit | 0.21 | ABIE51_RS13380 | | argininosuccinate lyase | 0.87 | 36 |
| Phocaeicola vulgatus CL09T03C04 | 0.40 | HMPREF1058_RS14555 | | 3-isopropylmalate dehydratase small subunit | 0.23 | HMPREF1058_RS09585 | | argininosuccinate lyase | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.40 | A4249_RS10000 | | 3-isopropylmalate dehydratase small subunit | 0.64 | A4249_RS12555 | | argininosuccinate lyase | 0.99 | 15 |
| Phocaeicola dorei CL03T12C01 | 0.39 | ABI39_RS10205 | | 3-isopropylmalate dehydratase small subunit | 0.23 | ABI39_RS07095 | | argininosuccinate lyase | 0.81 | 18 |
| Bacteroides ovatus ATCC 8483 | 0.39 | BACOVA_04602 | | 3-isopropylmalate dehydratase, small subunit | 0.22 | BACOVA_03551 | | argininosuccinate lyase | 0.92 | 29 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.39 | BT1859 | | 3-isopropylmalate dehydratase small subunit (NCBI ptt file) | 0.22 | BT3733 | | arginosuccinate lyase (EC 4.3.2.1) (from data) | 0.86 | 13 |
| Mycobacterium tuberculosis H37Rv | 0.34 | Rv2987c | | Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | 0.36 | Rv1659 | | Probable argininosuccinate lyase ArgH | — | — |
Not shown: 3 genomes with orthologs for Dshi_0083 only; 5 genomes with orthologs for Dshi_3062 only