Conservation of cofitness between b3958 and b3771 in Escherichia coli BW25113

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3958 argC N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) 1.0 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.91 11
Escherichia coli ECRC62 1.00 BNILDI_05795 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 BNILDI_04750 ilvD dihydroxy-acid dehydratase — —
Escherichia coli BL21 1.00 ECD_03843 N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding 1.00 ECD_03649 dihydroxyacid dehydratase 0.74 21
Escherichia coli ECOR27 1.00 NOLOHH_05730 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04092 N-acetyl-gamma-glutamyl-phosphate reductase 1.00 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_12230 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS22845 N-acetyl-gamma-glutamyl-phosphate reductase 0.99 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 52
Escherichia coli ECRC98 0.99 JDDGAC_17210 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 JDDGAC_18260 ilvD dihydroxy-acid dehydratase — —
Escherichia fergusonii Becca 0.99 EFB2_04656 N-acetyl-gamma-glutamyl-phosphate reductase 0.99 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC99 0.99 KEDOAH_14575 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC102 0.99 NIAGMN_11335 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC101 0.99 OKFHMN_13585 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 OKFHMN_14640 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC101 0.99 MCAODC_04085 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 MCAODC_05145 ilvD dihydroxy-acid dehydratase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF2344 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.97 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS00845 N-acetyl-gamma-glutamyl-phosphate reductase 0.96 BWI76_RS00975 dihydroxy-acid dehydratase 0.94 5
Enterobacter asburiae PDN3 0.90 EX28DRAFT_4420 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.96 EX28DRAFT_4443 dihydroxy-acid dehydratase 0.67 33
Enterobacter sp. TBS_079 0.89 MPMX20_04522 N-acetyl-gamma-glutamyl-phosphate reductase 0.97 MPMX20_04499 Dihydroxy-acid dehydratase 0.94 6
Serratia liquefaciens MT49 0.82 IAI46_24515 N-acetyl-gamma-glutamyl-phosphate reductase 0.90 IAI46_24345 dihydroxy-acid dehydratase low > 86
Rahnella sp. WP5 0.79 EX31_RS14190 N-acetyl-gamma-glutamyl-phosphate reductase 0.87 EX31_RS15005 dihydroxy-acid dehydratase 0.99 7
Dickeya dianthicola 67-19 0.79 HGI48_RS00875 N-acetyl-gamma-glutamyl-phosphate reductase 0.91 HGI48_RS20295 dihydroxy-acid dehydratase 0.89 5
Pectobacterium carotovorum WPP14 0.79 HER17_RS20630 N-acetyl-gamma-glutamyl-phosphate reductase 0.91 HER17_RS01075 dihydroxy-acid dehydratase 0.72 61
Dickeya dadantii 3937 0.78 DDA3937_RS20350 N-acetyl-gamma-glutamyl-phosphate reductase 0.92 DDA3937_RS20155 dihydroxy-acid dehydratase 0.80 24
Pantoea sp. MT58 0.78 IAI47_00905 N-acetyl-gamma-glutamyl-phosphate reductase 0.89 IAI47_01035 dihydroxy-acid dehydratase 0.79 26
Erwinia tracheiphila SCR3 0.78 LU632_RS19615 argC N-acetyl-gamma-glutamyl-phosphate reductase 0.86 LU632_RS24400 ilvD dihydroxy-acid dehydratase low > 74
Dickeya dianthicola ME23 0.78 DZA65_RS00935 N-acetyl-gamma-glutamyl-phosphate reductase 0.91 DZA65_RS21335 dihydroxy-acid dehydratase 0.85 13
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_13380 N-acetyl-gamma-glutamyl-phosphate reductase 0.85 CSW01_00140 dihydroxy-acid dehydratase low > 62
Alteromonas macleodii MIT1002 0.47 MIT1002_00471 N-acetyl-gamma-glutamyl-phosphate reductase 0.79 MIT1002_04041 Dihydroxy-acid dehydratase 0.98 12
Shewanella sp. ANA-3 0.45 Shewana3_3905 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) 0.80 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.93 8
Shewanella oneidensis MR-1 0.44 SO0275 argC N-acetyl-gamma-glutamyl-phosphate reductase (NCBI ptt file) 0.80 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.95 17
Shewanella loihica PV-4 0.44 Shew_0202 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) 0.78 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.97 25
Shewanella amazonensis SB2B 0.44 Sama_0256 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) 0.79 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.96 8
Pseudomonas putida KT2440 0.32 PP_0432 N-acetyl-gamma-glutamyl-phosphate reductase 1 0.74 PP_5128 Dihydroxy-acid dehydratase low > 96
Methanococcus maripaludis JJ 0.32 MMJJ_RS04805 N-acetyl-gamma-glutamyl-phosphate reductase 0.35 MMJJ_RS03675 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS27315 N-acetyl-gamma-glutamyl-phosphate reductase 0.75 PFLU_RS28535 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens SBW25 0.32 PFLU_RS27315 N-acetyl-gamma-glutamyl-phosphate reductase 0.75 PFLU_RS28535 dihydroxy-acid dehydratase — —
Pseudomonas simiae WCS417 0.31 PS417_25660 N-acetyl-gamma-glutamyl-phosphate reductase 0.75 PS417_26890 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_14490 N-acetyl-gamma-glutamyl-phosphate reductase 0.75 AO356_13250 dihydroxy-acid dehydratase low > 104
Methanococcus maripaludis S2 0.31 MMP_RS00680 N-acetyl-gamma-glutamyl-phosphate reductase 0.35 MMP_RS01700 dihydroxy-acid dehydratase — —
Pseudomonas sp. S08-1 0.31 OH686_15195 N-acetyl-gamma-glutamyl-phosphate reductase 0.75 OH686_14100 dihydroxy-acid dehydratase 0.55 56
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_07155 N-acetyl-gamma-glutamyl-phosphate reductase 0.75 AO353_08345 dihydroxy-acid dehydratase 0.66 21
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_2559 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.75 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Rhodospirillum rubrum S1H 0.31 Rru_A2421 N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) 0.71 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) 0.78 6
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1233 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.75 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.76 48
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_4836 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.75 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 103
Pseudomonas sp. RS175 0.30 PFR28_04033 N-acetyl-gamma-glutamyl-phosphate reductase 0.75 PFR28_04278 Dihydroxy-acid dehydratase low > 88
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS19210 N-acetyl-gamma-glutamyl-phosphate reductase 0.74 HSERO_RS02650 dihydroxy-acid dehydratase low > 78
Magnetospirillum magneticum AMB-1 0.30 AMB_RS09075 N-acetyl-gamma-glutamyl-phosphate reductase 0.73 AMB_RS12770 dihydroxy-acid dehydratase — —
Castellaniella sp019104865 MT123 0.30 ABCV34_RS10590 N-acetyl-gamma-glutamyl-phosphate reductase 0.72 ABCV34_RS14810 dihydroxy-acid dehydratase — —
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_4569 N-acetyl-gamma-glutamyl-phosphate reductase 0.74 Psyr_0469 dihydroxyacid dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_4569 N-acetyl-gamma-glutamyl-phosphate reductase 0.74 Psyr_0469 dihydroxyacid dehydratase — —
Marinobacter adhaerens HP15 0.29 HP15_352 N-acetyl-gamma-glutamyl-phosphate reductase 0.70 HP15_595 dihydroxy-acid dehydratase 0.55 64
Pseudomonas stutzeri RCH2 0.29 Psest_3639 N-acetyl-gamma-glutamyl-phosphate reductase, common form 0.75 Psest_0234 dihydroxy-acid dehydratase — —
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU0492 argC N-acetyl-gamma-glutamyl-phosphate reductase (TIGR) 0.39 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) 0.86 24
Desulfovibrio vulgaris Miyazaki F 0.29 DvMF_1717 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) 0.39 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) 0.87 27
Acinetobacter radioresistens SK82 0.29 MPMX26_01281 N-acetyl-gamma-glutamyl-phosphate reductase 0.29 MPMX26_03019 Dihydroxy-acid dehydratase low > 36
Azospirillum sp. SherDot2 0.27 MPMX19_03843 N-acetyl-gamma-glutamyl-phosphate reductase 0.74 MPMX19_05356 Dihydroxy-acid dehydratase — —
Synechococcus elongatus PCC 7942 0.26 Synpcc7942_1433 argC N-acetyl-gamma-glutamyl-phosphate reductase 0.75 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS07795 N-acetyl-gamma-glutamyl-phosphate reductase 0.74 AZOBR_RS15015 dihydroxy-acid dehydratase — —
Dinoroseobacter shibae DFL-12 0.24 Dshi_1759 N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) 0.31 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.23 PGA1_c17050 N-acetyl-gamma-glutamyl-phosphate reductase ArgC 0.70 PGA1_c29490 dihydroxy-acid dehydratase LivD 0.71 13
Bacteroides stercoris CC31F 0.21 HMPREF1181_RS03450 N-acetyl-gamma-glutamyl-phosphate reductase 0.64 HMPREF1181_RS08335 dihydroxy-acid dehydratase 0.86 45
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS15505 N-acetyl-gamma-glutamyl-phosphate reductase 0.27 ABZR88_RS11575 dihydroxy-acid dehydratase — —
Bacteroides ovatus ATCC 8483 0.21 BACOVA_03589 N-acetyl-gamma-glutamyl-phosphate reductase 0.62 BACOVA_03302 dihydroxy-acid dehydratase 0.95 16
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS18540 N-succinylglutamylphosphate reductase (EC 1.2.1.38) (from data) 0.27 CA265_RS15795 dihydroxy-acid dehydratase 0.89 22
Mycobacterium tuberculosis H37Rv 0.21 Rv1652 Probable N-acetyl-gamma-glutamyl-phoshate reductase ArgC 0.31 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) — —
Bacteroides thetaiotaomicron VPI-5482 0.21 BT3759 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) 0.63 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.90 18
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS10580 N-acetyl-gamma-glutamyl-phosphate reductase 0.65 HMPREF1078_RS16695 dihydroxy-acid dehydratase low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_06250 N-acetyl-gamma-glutamyl-phosphate reductase 0.28 CA264_06935 dihydroxy-acid dehydratase low > 74
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS08840 N-acetyl-gamma-glutamyl-phosphate reductase 0.64 HMPREF1058_RS16815 dihydroxy-acid dehydratase low > 67
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS02970 N-acetyl-gamma-glutamyl-phosphate reductase 0.64 ABI39_RS12715 dihydroxy-acid dehydratase 0.85 20
Lysobacter sp. OAE881 0.20 ABIE51_RS13385 N-acetyl-gamma-glutamyl-phosphate reductase 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.98 14
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_3847 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) 0.29 Echvi_2055 dihydroxy-acid dehydratase 0.94 10
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS08700 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) 0.28 ABZR86_RS15945 dihydroxy-acid dehydratase 0.92 32
Bosea sp. OAE506 0.18 ABIE41_RS15755 N-acetyl-gamma-glutamyl-phosphate reductase 0.29 ABIE41_RS15690 dihydroxy-acid dehydratase — —
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.2322.1 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.72 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.93 10
Rhodanobacter sp. FW510-T8 0.17 OKGIIK_09435 argC N-acetyl-gamma-glutamyl-phosphate reductase 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase low > 52
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS02385 N-acetyl-gamma-glutamyl-phosphate reductase 0.26 LRK54_RS10320 dihydroxy-acid dehydratase 0.83 17
Bifidobacterium breve UCC2003 0.17 BBR_RS13885 N-acetyl-gamma-glutamyl-phosphate reductase 0.56 BBR_RS17635 dihydroxy-acid dehydratase low > 34
Rhodanobacter denitrificans MT42 0.17 LRK55_RS02140 N-acetyl-gamma-glutamyl-phosphate reductase 0.26 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Ralstonia solanacearum GMI1000 0.14 RS_RS00700 N-acetyl-gamma-glutamyl-phosphate reductase 0.28 RS_RS12105 dihydroxy-acid dehydratase — —
Ralstonia sp. UNC404CL21Col 0.14 ABZR87_RS05600 N-acetyl-gamma-glutamyl-phosphate reductase 0.75 ABZR87_RS00240 dihydroxy-acid dehydratase low > 80
Ralstonia solanacearum UW163 0.14 UW163_RS03490 N-acetyl-gamma-glutamyl-phosphate reductase 0.29 UW163_RS09135 dihydroxy-acid dehydratase — —
Ralstonia solanacearum IBSBF1503 0.14 RALBFv3_RS10090 N-acetyl-gamma-glutamyl-phosphate reductase 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase — —
Ralstonia solanacearum PSI07 0.14 RPSI07_RS23280 N-acetyl-gamma-glutamyl-phosphate reductase 0.29 RPSI07_RS12840 dihydroxy-acid dehydratase — —
Cupriavidus basilensis FW507-4G11 0.13 RR42_RS01210 n-acetyl-gamma-glutamyl-phosphate reductase 0.29 RR42_RS16210 dihydroxy-acid dehydratase — —
Variovorax sp. SCN45 0.13 GFF4146 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Acidovorax sp. GW101-3H11 0.11 Ac3H11_2950 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.74 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.36 23
Sphingomonas koreensis DSMZ 15582 0.10 Ga0059261_0351 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase 0.99 3
Variovorax sp. OAS795 0.09 ABID97_RS02250 N-acetyl-gamma-glutamyl-phosphate reductase 0.31 ABID97_RS17500 dihydroxy-acid dehydratase — —

Not shown: 1 genomes with orthologs for b3958 only; 13 genomes with orthologs for b3771 only