Conservation of cofitness between b0004 and b2329 in Escherichia coli BW25113

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0004 thrC threonine synthase (NCBI) 1.0 b2329 aroC chorismate synthase (NCBI) 0.92 11
Escherichia coli ECOR27 1.00 NOLOHH_03430 thrC threonine synthase 0.99 NOLOHH_14250 aroC chorismate synthase — —
Escherichia coli ECRC102 1.00 NIAGMN_08950 thrC threonine synthase 1.00 NIAGMN_20390 aroC chorismate synthase — —
Escherichia fergusonii Becca 1.00 EFB2_04039 Threonine synthase 1.00 EFB2_01529 Chorismate synthase low > 86
Escherichia coli BL21 1.00 ECD_00004 L-threonine synthase 1.00 ECD_02254 chorismate synthase low > 60
Escherichia coli ECRC101 1.00 MCAODC_01615 thrC threonine synthase 1.00 MCAODC_13655 aroC chorismate synthase — —
Escherichia coli ECRC98 1.00 JDDGAC_14695 thrC threonine synthase 1.00 JDDGAC_26575 aroC chorismate synthase — —
Escherichia coli ECRC62 1.00 BNILDI_08170 thrC threonine synthase 0.99 BNILDI_13170 aroC chorismate synthase — —
Escherichia coli ECRC101 1.00 OKFHMN_11100 thrC threonine synthase 1.00 OKFHMN_22615 aroC chorismate synthase — —
Escherichia coli ECRC99 1.00 KEDOAH_17055 thrC threonine synthase 1.00 KEDOAH_05580 aroC chorismate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03656 Threonine synthase 1.00 OHPLBJKB_01376 Chorismate synthase low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00020 threonine synthase 1.00 ECOLIN_RS13490 chorismate synthase — —
Escherichia coli ECOR38 0.99 HEPCGN_09105 thrC threonine synthase 1.00 HEPCGN_21820 aroC chorismate synthase low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3616 threonine synthase 0.89 EX28DRAFT_0275 chorismate synthase (EC 4.2.3.5) — —
Enterobacter sp. TBS_079 0.93 MPMX20_00712 Threonine synthase 0.89 MPMX20_03264 Chorismate synthase 0.88 41
Klebsiella michiganensis M5al 0.92 BWI76_RS04255 threonine synthase 0.91 BWI76_RS20435 chorismate synthase 0.68 69
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF1080 Threonine synthase (EC 4.2.3.1) 0.93 GFF1950 Chorismate synthase (EC 4.2.3.5) low > 78
Rahnella sp. WP5 0.85 EX31_RS03935 threonine synthase 0.85 EX31_RS19685 chorismate synthase — —
Serratia liquefaciens MT49 0.84 IAI46_03040 threonine synthase 0.86 IAI46_18025 chorismate synthase 0.68 43
Pantoea sp. MT58 0.81 IAI47_16205 threonine synthase 0.83 IAI47_06150 chorismate synthase — —
Dickeya dadantii 3937 0.80 DDA3937_RS18405 threonine synthase 0.86 DDA3937_RS14580 chorismate synthase — —
Dickeya dianthicola ME23 0.80 DZA65_RS19475 threonine synthase 0.85 DZA65_RS15465 chorismate synthase — —
Erwinia tracheiphila SCR3 0.79 LU632_RS02620 thrC threonine synthase 0.87 LU632_RS07775 aroC chorismate synthase — —
Dickeya dianthicola 67-19 0.79 HGI48_RS18335 threonine synthase 0.85 HGI48_RS14530 chorismate synthase — —
Pectobacterium carotovorum WPP14 0.79 HER17_RS02805 threonine synthase 0.85 HER17_RS06935 chorismate synthase 0.95 4
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_11965 threonine synthase 0.77 CSW01_10560 chorismate synthase low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_03084 Threonine synthase 0.75 MIT1002_01229 Chorismate synthase — —
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.74 Shew_2416 chorismate synthase (RefSeq) low > 60
Shewanella sp. ANA-3 0.56 Shewana3_1141 threonine synthase (RefSeq) 0.75 Shewana3_1469 chorismate synthase (RefSeq) 0.91 39
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.77 Sama_2159 chorismate synthase (RefSeq) — —
Phocaeicola vulgatus CL09T03C04 0.42 HMPREF1058_RS14730 threonine synthase 0.46 HMPREF1058_RS16730 chorismate synthase low > 67
Phocaeicola dorei CL03T12C01 0.42 ABI39_RS10440 threonine synthase 0.46 ABI39_RS12645 chorismate synthase 0.85 11
Bacteroides thetaiotaomicron VPI-5482 0.41 BT2401 threonine synthase (NCBI ptt file) 0.44 BT2084 chorismate synthase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03023 threonine synthase 0.43 BACOVA_03296 chorismate synthase low > 94
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS00050 threonine synthase 0.45 HMPREF1181_RS08365 chorismate synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_2002 threonine synthase 0.48 Echvi_1518 chorismate synthase — —
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS10395 threonine synthase 0.47 HMPREF1078_RS16710 chorismate synthase low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS18960 threonine synthase 0.44 ABZR88_RS06995 chorismate synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS23465 threonine synthase 0.46 CA265_RS11645 chorismate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.62 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) 0.75 55
Lysobacter sp. OAE881 0.30 ABIE51_RS17530 threonine synthase 0.62 ABIE51_RS08220 chorismate synthase — —
Caulobacter crescentus NA1000 0.29 CCNA_03510 threonine synthase 0.52 CCNA_03256 chorismate synthase — —
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_03510 threonine synthase 0.52 CCNA_03256 chorismate synthase — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.64 LRK55_RS01505 chorismate synthase 0.65 57
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.66 ABZR86_RS08040 chorismate synthase 0.91 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.64 LRK54_RS01725 chorismate synthase — —
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_13570 thrC threonine synthase 0.66 OKGIIK_04805 aroC chorismate synthase low > 52
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.68 AO356_19540 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.68 Psyr_1853 chorismate synthase — —
Pseudomonas stutzeri RCH2 0.28 Psest_3125 threonine synthase 0.68 Psest_1903 chorismate synthase — —
Bosea sp. OAE506 0.28 ABIE41_RS22985 threonine synthase 0.62 ABIE41_RS10190 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.68 Psyr_1853 chorismate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.67 AO353_02250 chorismate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.68 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas putida KT2440 0.27 PP_1471 Threonine synthase 0.69 PP_1830 Chorismate synthase — —
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.68 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.67 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas simiae WCS417 0.27 PS417_22880 threonine synthase 0.67 PS417_19315 chorismate synthase — —
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.67 PFR28_03126 Chorismate synthase — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.67 PFLU_RS21280 chorismate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.67 PFLU_RS21280 chorismate synthase — —
Pseudomonas sp. S08-1 0.27 OH686_17765 threonine synthase 0.67 OH686_00675 chorismate synthase — —
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.53 Dshi_3275 Chorismate synthase (RefSeq) — —
Sinorhizobium meliloti 1021 0.26 SMc00077 threonine synthase 0.52 SMc00007 chorismate synthase — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.61 AZOBR_RS10730 chorismate synthase — —
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.58 MPMX19_01810 Chorismate synthase — —
Phaeobacter inhibens DSM 17395 0.26 PGA1_c06310 threonine synthase ThrC 0.54 PGA1_c34060 chorismate synthase AroC — —
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.62 TX73_006170 chorismate synthase — —
Magnetospirillum magneticum AMB-1 0.25 AMB_RS17140 threonine synthase 0.64 AMB_RS08025 chorismate synthase — —
Rhizobium sp. OAE497 0.25 ABIE40_RS04230 threonine synthase 0.52 ABIE40_RS03980 chorismate synthase — —
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.72 HP15_1838 chorismate synthase — —
Rhodospirillum rubrum S1H 0.25 Rru_A3233 Threonine synthase (NCBI) 0.59 Rru_A2623 Chorismate synthase (NCBI) — —
Agrobacterium fabrum C58 0.25 Atu0787 threonine synthase 0.52 Atu0754 chorismate synthase — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.64 ABCV34_RS04300 chorismate synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS00020 threonine synthase 0.52 A4249_RS08790 chorismate synthase — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1999 threonine synthase 0.50 Ga0059261_2470 chorismate synthase (EC 4.2.3.5) — —
Variovorax sp. OAS795 0.23 ABID97_RS25760 threonine synthase 0.60 ABID97_RS19805 chorismate synthase — —
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS10470 threonine synthase 0.62 HSERO_RS16525 chorismate synthase — —
Variovorax sp. SCN45 0.22 GFF2800 Threonine synthase (EC 4.2.3.1) 0.60 GFF2627 Chorismate synthase (EC 4.2.3.5) — —
Acidovorax sp. GW101-3H11 0.22 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.64 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) — —
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS12535 threonine synthase 0.64 RR42_RS06485 chorismate synthase — —
Paraburkholderia graminis OAS925 0.22 ABIE53_002027 threonine synthase 0.67 ABIE53_002916 chorismate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.62 GFF5239 Chorismate synthase (EC 4.2.3.5) — —
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.67 H281DRAFT_04489 chorismate synthase — —
Dechlorosoma suillum PS 0.21 Dsui_2904 threonine synthase 0.66 Dsui_3204 chorismate synthase — —
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS05865 threonine synthase 0.64 ABZR87_RS13790 chorismate synthase low > 80
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS22400 threonine synthase 0.66 QEN71_RS05215 chorismate synthase 0.86 9
Ralstonia solanacearum GMI1000 0.21 RS_RS06660 threonine synthase 0.61 RS_RS07885 chorismate synthase — —
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS08960 threonine synthase 0.66 BPHYT_RS13705 chorismate synthase 0.62 60
Bifidobacterium breve UCC2003 0.20 BBR_RS14070 threonine synthase 0.26 BBR_RS15080 chorismate synthase low > 34
Ralstonia solanacearum PSI07 0.20 RPSI07_RS17485 threonine synthase 0.62 RPSI07_RS15640 chorismate synthase — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.62 RALBFv3_RS01850 chorismate synthase — —
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.62 UW163_RS15160 chorismate synthase — —

Not shown: 1 genomes with orthologs for b0004 only; 10 genomes with orthologs for b2329 only