Conservation of cofitness between b0945 and b2023 in Escherichia coli BW25113

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0945 pyrD dihydroorotate dehydrogenase (NCBI) 1.0 b2023 hisH imidazole glycerol phosphate synthase subunit HisH (NCBI) 0.83 15
Escherichia coli ECRC102 1.00 NIAGMN_03015 pyrD quinone-dependent dihydroorotate dehydrogenase 1.00 NIAGMN_22445 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02721 Dihydroorotate dehydrogenase (quinone) 1.00 OHPLBJKB_01677 Imidazole glycerol phosphate synthase subunit HisH low > 73
Escherichia coli ECRC62 1.00 BNILDI_20015 pyrD quinone-dependent dihydroorotate dehydrogenase 1.00 BNILDI_14725 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECRC101 1.00 OKFHMN_05295 pyrD quinone-dependent dihydroorotate dehydrogenase 1.00 OKFHMN_24500 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli BL21 1.00 ECD_00949 dihydro-orotate oxidase, FMN-linked 1.00 ECD_01925 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit low > 60
Escherichia coli ECRC99 1.00 KEDOAH_22440 pyrD quinone-dependent dihydroorotate dehydrogenase 1.00 KEDOAH_03650 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECRC98 1.00 JDDGAC_08905 pyrD quinone-dependent dihydroorotate dehydrogenase 1.00 JDDGAC_28610 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECOR27 1.00 NOLOHH_21850 pyrD quinone-dependent dihydroorotate dehydrogenase 1.00 NOLOHH_15815 hisH imidazole glycerol phosphate synthase subunit HisH low > 57
Escherichia coli ECRC101 1.00 MCAODC_24685 pyrD quinone-dependent dihydroorotate dehydrogenase 1.00 MCAODC_20440 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECOR38 1.00 HEPCGN_23225 pyrD quinone-dependent dihydroorotate dehydrogenase 1.00 HEPCGN_03205 hisH imidazole glycerol phosphate synthase subunit HisH low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04965 quinone-dependent dihydroorotate dehydrogenase 1.00 ECOLIN_RS11960 imidazole glycerol phosphate synthase subunit HisH
Escherichia fergusonii Becca 0.99 EFB2_03126 Dihydroorotate dehydrogenase (quinone) 1.00 EFB2_01833 Imidazole glycerol phosphate synthase subunit HisH low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF3236 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.93 GFF3909 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) low > 78
Enterobacter sp. TBS_079 0.94 MPMX20_01596 Dihydroorotate dehydrogenase (quinone) 0.92 MPMX20_03005 Imidazole glycerol phosphate synthase subunit HisH 0.76 50
Enterobacter asburiae PDN3 0.94 EX28DRAFT_1998 dihydroorotate oxidase A (EC 1.3.3.1) 0.92 EX28DRAFT_0536 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Klebsiella michiganensis M5al 0.93 BWI76_RS09910 dihydroorotate dehydrogenase (quinone) 0.89 BWI76_RS18940 imidazole glycerol phosphate synthase subunit HisH 0.58 52
Serratia liquefaciens MT49 0.87 IAI46_08805 quinone-dependent dihydroorotate dehydrogenase 0.82 IAI46_08195 imidazole glycerol phosphate synthase subunit HisH low > 86
Pectobacterium carotovorum WPP14 0.86 HER17_RS12005 quinone-dependent dihydroorotate dehydrogenase 0.75 HER17_RS12245 imidazole glycerol phosphate synthase subunit HisH 0.95 22
Dickeya dianthicola ME23 0.86 DZA65_RS13390 quinone-dependent dihydroorotate dehydrogenase 0.77 DZA65_RS10040 imidazole glycerol phosphate synthase subunit HisH
Rahnella sp. WP5 0.86 EX31_RS18095 quinone-dependent dihydroorotate dehydrogenase 0.75 EX31_RS11455 imidazole glycerol phosphate synthase subunit HisH 0.94 10
Dickeya dadantii 3937 0.86 DDA3937_RS12855 quinone-dependent dihydroorotate dehydrogenase 0.78 DDA3937_RS09720 imidazole glycerol phosphate synthase subunit HisH 0.53 72
Dickeya dianthicola 67-19 0.85 HGI48_RS12925 quinone-dependent dihydroorotate dehydrogenase 0.77 HGI48_RS09730 imidazole glycerol phosphate synthase subunit HisH low > 71
Erwinia tracheiphila SCR3 0.84 LU632_RS09955 pyrD quinone-dependent dihydroorotate dehydrogenase 0.76 LU632_RS08930 hisH imidazole glycerol phosphate synthase subunit HisH 0.87 13
Pantoea sp. MT58 0.81 IAI47_12705 quinone-dependent dihydroorotate dehydrogenase 0.78 IAI47_07075 imidazole glycerol phosphate synthase subunit HisH 0.80 22
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_07490 dihydroorotate dehydrogenase (quinone) 0.62 CSW01_05765 imidazole glycerol phosphate synthase subunit HisH low > 62
Shewanella sp. ANA-3 0.63 Shewana3_1786 dihydroorotate dehydrogenase 2 (RefSeq) 0.49 Shewana3_1850 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.87 22
Shewanella loihica PV-4 0.63 Shew_1810 dihydroorotate dehydrogenase 2 (RefSeq) 0.53 Shew_2201 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.73 47
Shewanella amazonensis SB2B 0.62 Sama_1593 dihydroorotate dehydrogenase 2 (RefSeq) 0.46 Sama_1945 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.61 57
Shewanella oneidensis MR-1 0.62 SO2592 pyrD dihydroorotate dehydrogenase (NCBI ptt file) 0.49 SO2070 hisH amidotransferase HisH (NCBI ptt file) 0.83 49
Alteromonas macleodii MIT1002 0.58 MIT1002_02035 Dihydroorotate dehydrogenase (quinone) 0.51 MIT1002_02636 Imidazole glycerol phosphate synthase subunit HisH low > 70
Pseudomonas fluorescens SBW25 0.57 PFLU_RS22550 quinone-dependent dihydroorotate dehydrogenase 0.30 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS22550 quinone-dependent dihydroorotate dehydrogenase 0.30 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS22765 quinone-dependent dihydroorotate dehydrogenase 0.30 QEN71_RS27845 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_3842 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.31 Pf1N1B4_1626 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_00780 dihydroorotate dehydrogenase (quinone) 0.31 AO353_12075 imidazole glycerol phosphate synthase subunit HisH
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS08565 dihydroorotate dehydrogenase 0.29 BPHYT_RS17690 imidazole glycerol phosphate synthase 0.49 94
Pseudomonas simiae WCS417 0.57 PS417_20935 dihydroorotate dehydrogenase 0.30 PS417_01565 imidazole glycerol phosphate synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_2106 dihydroorotate oxidase A 0.30 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_2106 dihydroorotate oxidase A 0.30 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH
Paraburkholderia graminis OAS925 0.56 ABIE53_001954 dihydroorotate dehydrogenase 0.29 ABIE53_003697 glutamine amidotransferase
Pseudomonas sp. RS175 0.56 PFR28_01054 Dihydroorotate dehydrogenase (quinone) 0.31 PFR28_04930 Imidazole glycerol phosphate synthase subunit HisH
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_2347 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.31 Pf6N2E2_3841 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_4095 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.30 PfGW456L13_361 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_02610 dihydroorotate dehydrogenase (quinone) 0.36 AO356_03385 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas sp. S08-1 0.55 OH686_03120 dihydroorotate dehydrogenase (fumarate) 0.31 OH686_14580 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Dechlorosoma suillum PS 0.55 Dsui_2978 dihydroorotate dehydrogenase, subfamily 2 0.30 Dsui_1416 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Kangiella aquimarina DSM 16071 0.55 B158DRAFT_2228 dihydroorotate oxidase A (EC 1.3.3.1) 0.24 B158DRAFT_2290 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Pseudomonas stutzeri RCH2 0.55 Psest_1947 dihydroorotate dehydrogenase, subfamily 2 0.31 Psest_0153 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.45 18
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_00743 dihydroorotate oxidase A 0.29 H281DRAFT_05657 imidazole glycerol phosphate synthase subunit hisH
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS13360 quinone-dependent dihydroorotate dehydrogenase 0.30 ABZR87_RS02480 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas putida KT2440 0.54 PP_2095 Dihydroorotate dehydrogenase (quinone) 0.31 PP_0290 Imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS01570 quinone-dependent dihydroorotate dehydrogenase 0.30 RALBFv3_RS06825 imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum UW163 0.54 UW163_RS14880 quinone-dependent dihydroorotate dehydrogenase 0.30 UW163_RS06790 imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum GMI1000 0.53 RS_RS08160 dihydroorotate dehydrogenase (quinone) 0.31 RS_RS14770 imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum PSI07 0.53 RPSI07_RS15920 quinone-dependent dihydroorotate dehydrogenase 0.31 RPSI07_RS10410 imidazole glycerol phosphate synthase subunit HisH
Acinetobacter radioresistens SK82 0.53 MPMX26_01120 Dihydroorotate dehydrogenase (quinone) 0.37 MPMX26_02846 Imidazole glycerol phosphate synthase subunit HisH low > 36
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS16155 dihydroorotate dehydrogenase 0.33 HSERO_RS21015 imidazole glycerol phosphate synthase
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS07465 dihydroorotate dehydrogenase 0.28 RR42_RS18895 imidazole glycerol phosphate synthase
Acidovorax sp. GW101-3H11 0.51 Ac3H11_4100 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.30 Ac3H11_4731 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Castellaniella sp019104865 MT123 0.50 ABCV34_RS07790 quinone-dependent dihydroorotate dehydrogenase 0.25 ABCV34_RS11240 imidazole glycerol phosphate synthase subunit HisH
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS07450 quinone-dependent dihydroorotate dehydrogenase 0.45 ABZR86_RS06715 imidazole glycerol phosphate synthase subunit HisH
Rhodanobacter denitrificans MT42 0.50 LRK55_RS15740 quinone-dependent dihydroorotate dehydrogenase 0.43 LRK55_RS01370 imidazole glycerol phosphate synthase subunit HisH
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS15985 quinone-dependent dihydroorotate dehydrogenase 0.43 LRK54_RS01590 imidazole glycerol phosphate synthase subunit HisH
Variovorax sp. SCN45 0.49 GFF960 Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) 0.33 GFF5350 Imidazole glycerol phosphate synthase amidotransferase subunit HisH
Variovorax sp. OAS795 0.48 ABID97_RS14065 quinone-dependent dihydroorotate dehydrogenase 0.32 ABID97_RS23135 imidazole glycerol phosphate synthase subunit HisH
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_09010 pyrD quinone-dependent dihydroorotate dehydrogenase 0.43 OKGIIK_04965 hisH imidazole glycerol phosphate synthase subunit HisH
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF4211 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.30 GFF1311 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Marinobacter adhaerens HP15 0.47 HP15_1377 dihydroorotate dehydrogenase 0.33 HP15_3011 imidazole glycerol phosphate synthase subunit HisH
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.3032.1 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.41 Xcc-8004.2945.1 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Lysobacter sp. OAE881 0.45 ABIE51_RS13725 quinone-dependent dihydroorotate dehydrogenase 0.40 ABIE51_RS13310 imidazole glycerol phosphate synthase subunit HisH
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS14005 dihydroorotate dehydrogenase (quinone) 0.40 CA265_RS03620 imidazole glycerol phosphate synthase subunit HisH
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_1806 dihydroorotate dehydrogenase, subfamily 2 0.36 Echvi_2514 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS12040 quinone-dependent dihydroorotate dehydrogenase 0.37 ABZR88_RS06865 imidazole glycerol phosphate synthase subunit HisH
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_00865 dihydroorotate dehydrogenase (quinone) 0.40 CA264_05100 imidazole glycerol phosphate synthase subunit HisH low > 74
Sinorhizobium meliloti 1021 0.40 SMc02245 dihydroorotate dehydrogenase 2 0.30 SMc02572 imidazole glycerol phosphate synthase subunit HisH 0.78 70
Agrobacterium fabrum C58 0.40 Atu0486 dihydroorotate dehydrogenase 0.31 Atu0041 glutamine amidotransferase 0.66 68
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_1468 dihydroorotate oxidase A (EC 1.3.3.1) 0.30 Ga0059261_3124 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Rhizobium sp. OAE497 0.38 ABIE40_RS02420 quinone-dependent dihydroorotate dehydrogenase 0.30 ABIE40_RS19450 imidazole glycerol phosphate synthase subunit HisH
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS00280 quinone-dependent dihydroorotate dehydrogenase 0.40 A4249_RS10705 imidazole glycerol phosphate synthase subunit HisH
Rhodopseudomonas palustris CGA009 0.37 TX73_004110 quinone-dependent dihydroorotate dehydrogenase 0.29 TX73_001615 imidazole glycerol phosphate synthase subunit HisH
Azospirillum sp. SherDot2 0.37 MPMX19_02083 Dihydroorotate dehydrogenase (quinone) 0.32 MPMX19_02545 Imidazole glycerol phosphate synthase subunit HisH
Azospirillum brasilense Sp245 0.36 AZOBR_RS13520 dihydroorotate dehydrogenase 0.29 AZOBR_RS01670 imidazole glycerol phosphate synthase 0.65 20
Magnetospirillum magneticum AMB-1 0.36 AMB_RS19685 quinone-dependent dihydroorotate dehydrogenase 0.28 AMB_RS22935 imidazole glycerol phosphate synthase subunit HisH
Rhodospirillum rubrum S1H 0.36 Rru_A0514 Dihydroorotate dehydrogenase 2 (NCBI) 0.31 Rru_A3596 Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (NCBI) 0.59 47
Mycobacterium tuberculosis H37Rv 0.36 Rv2139 Probable dihydroorotate dehydrogenase PyrD 0.31 Rv1602 Probable amidotransferase HisH
Bosea sp. OAE506 0.33 ABIE41_RS24065 quinone-dependent dihydroorotate dehydrogenase 0.32 ABIE41_RS03955 imidazole glycerol phosphate synthase subunit HisH low > 77
Phaeobacter inhibens DSM 17395 0.33 PGA1_c12150 dihydroorotate dehydrogenase PyrD 0.32 PGA1_c09320 imidazole glycerol phosphate synthase subunit HisH
Dinoroseobacter shibae DFL-12 0.32 Dshi_0847 Dihydroorotate oxidase (RefSeq) 0.32 Dshi_0795 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (RefSeq)
Caulobacter crescentus NA1000 0.31 CCNA_00562 dihydroorotate dehydrogenase 0.31 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.82 48
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_00562 dihydroorotate dehydrogenase 0.31 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit low > 67
Bacteroides thetaiotaomicron VPI-5482 0.26 BT1009 dihydroorotate dehydrogenase (NCBI ptt file) 0.42 BT1380 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) low > 81
Bifidobacterium breve UCC2003 0.22 BBR_RS12895 quinone-dependent dihydroorotate dehydrogenase 0.29 BBR_RS17035 imidazole glycerol phosphate synthase subunit HisH low > 34

Not shown: 0 genomes with orthologs for b0945 only; 10 genomes with orthologs for b2023 only