Conservation of cofitness between b0074 and b0072 in Escherichia coli BW25113

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0074 leuA 2-isopropylmalate synthase (NCBI) 1.0 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.99 1
Escherichia coli BL21 1.00 ECD_00076 2-isopropylmalate synthase 1.00 ECD_00074 3-isopropylmalate dehydratase large subunit 0.76 4
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03583 2-isopropylmalate synthase 1.00 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia coli ECOR38 1.00 HEPCGN_08695 2-isopropylmalate synthase 1.00 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 85
Escherichia coli ECRC62 1.00 BNILDI_08550 2-isopropylmalate synthase 1.00 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECOR27 1.00 NOLOHH_03060 2-isopropylmalate synthase 1.00 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 57
Escherichia fergusonii Becca 1.00 EFB2_03971 2-isopropylmalate synthase 1.00 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00400 2-isopropylmalate synthase 1.00 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit low > 52
Escherichia coli ECRC101 1.00 OKFHMN_10715 2-isopropylmalate synthase 1.00 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 1.00 MCAODC_01230 2-isopropylmalate synthase 1.00 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC99 1.00 KEDOAH_17440 2-isopropylmalate synthase 1.00 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC102 1.00 NIAGMN_08565 2-isopropylmalate synthase 1.00 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC98 1.00 JDDGAC_14310 2-isopropylmalate synthase 1.00 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1
Klebsiella michiganensis M5al 0.95 BWI76_RS04680 2-isopropylmalate synthase 0.95 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.96 3
Enterobacter asburiae PDN3 0.94 EX28DRAFT_3670 2-isopropylmalate synthase (EC 2.3.3.13) 0.95 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.97 1
Enterobacter sp. TBS_079 0.94 MPMX20_00769 2-isopropylmalate synthase 0.94 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.97 2
Pectobacterium carotovorum WPP14 0.87 HER17_RS03085 2-isopropylmalate synthase 0.86 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.99 3
Erwinia tracheiphila SCR3 0.86 LU632_RS02880 leuA 2-isopropylmalate synthase 0.79 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit 0.94 3
Dickeya dianthicola 67-19 0.86 HGI48_RS18055 2-isopropylmalate synthase 0.85 HGI48_RS18065 3-isopropylmalate dehydratase large subunit 0.90 4
Dickeya dadantii 3937 0.86 DDA3937_RS18115 2-isopropylmalate synthase 0.85 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit 0.96 1
Dickeya dianthicola ME23 0.86 DZA65_RS19200 2-isopropylmalate synthase 0.85 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.94 2
Serratia liquefaciens MT49 0.85 IAI46_03355 2-isopropylmalate synthase 0.86 IAI46_03345 3-isopropylmalate dehydratase large subunit 0.63 33
Pantoea sp. MT58 0.84 IAI47_16000 2-isopropylmalate synthase 0.87 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.99 1
Rahnella sp. WP5 0.82 EX31_RS03680 2-isopropylmalate synthase 0.87 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.96 3
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_12595 2-isopropylmalate synthase 0.80 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Shewanella amazonensis SB2B 0.67 Sama_0335 2-isopropylmalate synthase (RefSeq) 0.72 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.98 1
Shewanella sp. ANA-3 0.66 Shewana3_3761 2-isopropylmalate synthase (RefSeq) 0.73 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.99 1
Shewanella oneidensis MR-1 0.66 SO4236 leuA 2-isopropylmalate synthase (NCBI ptt file) 0.73 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.99 2
Shewanella loihica PV-4 0.66 Shew_3472 2-isopropylmalate synthase (RefSeq) 0.71 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.99 9
Alteromonas macleodii MIT1002 0.62 MIT1002_00949 2-isopropylmalate synthase 0.69 MIT1002_00947 3-isopropylmalate dehydratase large subunit 0.99 8
Pseudomonas stutzeri RCH2 0.47 Psest_1056 2-isopropylmalate synthase, bacterial type 0.63 Psest_2591 3-isopropylmalate dehydratase, large subunit low > 67
Dechlorosoma suillum PS 0.46 Dsui_3519 2-isopropylmalate synthase, bacterial type 0.60 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Marinobacter adhaerens HP15 0.45 HP15_538 2-isopropylmalate synthase 0.62 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain low > 73
Desulfovibrio vulgaris Miyazaki F 0.44 DvMF_1791 2-isopropylmalate synthase (RefSeq) 0.21 DvMF_1792 3-isopropylmalate dehydratase large subunit (RefSeq) 0.96 1
Phocaeicola vulgatus CL09T03C04 0.44 HMPREF1058_RS14545 2-isopropylmalate synthase 0.51 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit 0.78 42
Phocaeicola dorei CL03T12C01 0.44 ABI39_RS10195 2-isopropylmalate synthase 0.51 ABI39_RS10200 3-isopropylmalate dehydratase large subunit 0.89 1
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU2981 leuA 2-isopropylmalate synthase (TIGR) 0.21 DVU2982 leuC 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) 0.98 2
Parabacteroides merdae CL09T00C40 0.43 HMPREF1078_RS16665 2-isopropylmalate synthase 0.50 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit 0.98 2
Bacteroides stercoris CC31F 0.42 HMPREF1181_RS14150 2-isopropylmalate synthase 0.52 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit 0.97 1
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04556 2-isopropylmalate synthase 0.62 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit low > 103
Magnetospirillum magneticum AMB-1 0.42 AMB_RS17765 2-isopropylmalate synthase 0.65 AMB_RS20560 3-isopropylmalate dehydratase large subunit
Paraburkholderia graminis OAS925 0.42 ABIE53_001580 2-isopropylmalate synthase 0.62 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit low > 113
Ralstonia solanacearum PSI07 0.42 RPSI07_RS14285 2-isopropylmalate synthase 0.62 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.43 18
Ralstonia solanacearum UW163 0.42 UW163_RS10700 2-isopropylmalate synthase 0.62 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS03025 2-isopropylmalate synthase 0.62 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit low > 76
Ralstonia solanacearum GMI1000 0.42 RS_RS10395 2-isopropylmalate synthase 0.62 RS_RS10000 3-isopropylmalate dehydratase large subunit low > 80
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS06570 2-isopropylmalate synthase 0.62 BPHYT_RS33915 isopropylmalate isomerase low > 109
Bacteroides ovatus ATCC 8483 0.42 BACOVA_04604 2-isopropylmalate synthase 0.52 BACOVA_04603 3-isopropylmalate dehydratase, large subunit 0.95 8
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS14930 2-isopropylmalate synthase 0.63 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit low > 80
Bacteroides thetaiotaomicron VPI-5482 0.42 BT1861 2-isopropylmalate synthase (EC 2.3.3.13) (from data) 0.51 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) 0.90 24
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS24195 2-isopropylmalate synthase 0.62 QEN71_RS17605 3-isopropylmalate dehydratase large subunit low > 153
Rhodopseudomonas palustris CGA009 0.42 TX73_010545 2-isopropylmalate synthase 0.62 TX73_001245 3-isopropylmalate dehydratase large subunit
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS05465 2-isopropylmalate synthase 0.63 RR42_RS14400 isopropylmalate isomerase 0.39 9
Bosea sp. OAE506 0.41 ABIE41_RS13000 2-isopropylmalate synthase 0.63 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF4281 2-isopropylmalate synthase (EC 2.3.3.13) 0.60 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.58 21
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_1410 leuA 2-isopropylmalate synthase 0.51 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS15970 2-isopropylmalate synthase 0.51 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.98 2
Variovorax sp. OAS795 0.41 ABID97_RS14910 2-isopropylmalate synthase 0.60 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Acidovorax sp. GW101-3H11 0.41 Ac3H11_530 2-isopropylmalate synthase (EC 2.3.3.13) 0.59 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.39 57
Variovorax sp. SCN45 0.41 GFF1165 2-isopropylmalate synthase (EC 2.3.3.13) 0.60 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 127
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_01610 2-isopropylmalate synthase 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit low > 67
Caulobacter crescentus NA1000 0.40 CCNA_01610 2-isopropylmalate synthase 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.83 24
Lysobacter sp. OAE881 0.40 ABIE51_RS17570 2-isopropylmalate synthase 0.53 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.86 21
Phaeobacter inhibens DSM 17395 0.40 PGA1_c26470 2-isopropylmalate synthase LeuA 0.62 PGA1_c29780 3-isopropylmalate dehydratase large subunit 0.95 2
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS10345 2-isopropylmalate synthase 0.54 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Rhodanobacter denitrificans MT42 0.39 LRK55_RS09985 2-isopropylmalate synthase 0.54 LRK55_RS07105 3-isopropylmalate dehydratase large subunit low > 63
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.1056.1 2-isopropylmalate synthase (EC 2.3.3.13) 0.63 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.89 2
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_13575 leuA 2-isopropylmalate synthase 0.49 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit low > 52
Dinoroseobacter shibae DFL-12 0.38 Dshi_0596 2-isopropylmalate synthase (RefSeq) 0.61 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq) 0.75 22
Methanococcus maripaludis JJ 0.29 MMJJ_RS08870 2-isopropylmalate synthase 0.23 MMJJ_RS08425 3-isopropylmalate dehydratase large subunit
Methanococcus maripaludis S2 0.28 MMP_RS05500 2-isopropylmalate synthase 0.23 MMP_RS05930 3-isopropylmalate dehydratase large subunit 0.73 9
Sinorhizobium meliloti 1021 0.15 SMc02546 alpha-isopropylmalate/homocitrate synthase family transferase 0.66 SMc03823 isopropylmalate isomerase large subunit low > 103
Rhizobium sp. OAE497 0.15 ABIE40_RS06220 citramalate synthase 0.64 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.69 10
Pseudomonas sp. S08-1 0.12 OH686_17570 2-isopropylmalate synthase 0.63 OH686_04480 3-isopropylmalate dehydratase large subunit 0.76 7
Sphingomonas koreensis DSMZ 15582 0.12 Ga0059261_4031 2-isopropylmalate synthase, yeast type 0.59 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.99 2
Pseudomonas fluorescens FW300-N2C3 0.11 AO356_06550 2-isopropylmalate synthase 0.62 AO356_21400 isopropylmalate isomerase 0.96 2
Pseudomonas fluorescens FW300-N2E2 0.11 Pf6N2E2_3170 2-isopropylmalate synthase (EC 2.3.3.13) 0.62 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.87 15
Acinetobacter radioresistens SK82 0.10 MPMX26_00404 2-isopropylmalate synthase 0.62 MPMX26_00345 3-isopropylmalate dehydratase large subunit 0.92 6
Pseudomonas sp. RS175 0.10 PFR28_00305 2-isopropylmalate synthase 0.62 PFR28_02824 3-isopropylmalate dehydratase large subunit 0.81 2
Castellaniella sp019104865 MT123 0.10 ABCV34_RS12420 2-isopropylmalate synthase 0.62 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit low > 48
Pseudomonas fluorescens GW456-L13 0.10 PfGW456L13_4854 2-isopropylmalate synthase (EC 2.3.3.13) 0.62 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.97 2
Pseudomonas fluorescens FW300-N1B4 0.10 Pf1N1B4_847 2-isopropylmalate synthase (EC 2.3.3.13) 0.62 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.94 3
Agrobacterium fabrum C58 0.10 Atu2264 2-isopropylmalate synthase 0.64 Atu2709 3-isopropylmalate dehydratase, large subunit 0.99 1
Pseudomonas putida KT2440 0.10 PP_1025 2-isopropylmalate synthase 0.61 PP_1985 3-isopropylmalate dehydratase large subunit 0.88 2
Pseudomonas syringae pv. syringae B728a ΔmexB 0.10 Psyr_1257 2-isopropylmalate synthase 0.62 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.94 5
Pseudomonas simiae WCS417 0.10 PS417_23110 2-isopropylmalate synthase 0.61 PS417_18600 isopropylmalate isomerase 0.93 2
Pseudomonas fluorescens SBW25 0.10 PFLU_RS24765 2-isopropylmalate synthase 0.62 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.92 2
Pseudomonas syringae pv. syringae B728a 0.10 Psyr_1257 2-isopropylmalate synthase 0.62 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.94 1
Pseudomonas fluorescens SBW25-INTG 0.10 PFLU_RS24765 2-isopropylmalate synthase 0.62 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.95 1

Not shown: 0 genomes with orthologs for b0074 only; 14 genomes with orthologs for b0072 only