Homologs of SMa0143 from Sinorhizobium meliloti 1021

RNA polymerase ECF sigma factor
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMa0143 RNA polymerase ECF sigma factor insig. 100 100
o Sphingobium sp. HT1-2 GFF1466 RNA polymerase sigma-54 factor RpoN insig. 46 85
o Burkholderia phytofirmans PsJN BPHYT_RS08240 RNA polymerase subunit sigma-24 sig. 47 82
o Paraburkholderia sabiae LMG 24235 QEN71_RS23005 sigma-70 family RNA polymerase sigma factor insig. 47 82
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05124 RNA polymerase sigma-70 factor, ECF subfamily insig. 45 92
o Paraburkholderia graminis OAS925 ABIE53_002425 RNA polymerase sigma-70 factor (ECF subfamily) insig. 44 89
o Pectobacterium carotovorum WPP14 HER17_RS09715 sigma-70 family RNA polymerase sigma factor cofit 40 86
  Burkholderia phytofirmans PsJN BPHYT_RS24740 RNA polymerase subunit sigma-24 sig. 41 94
o Enterobacter asburiae PDN3 EX28DRAFT_2729 RNA polymerase sigma factor, sigma-70 family insig. 40 89
o Cupriavidus basilensis FW507-4G11 RR42_RS32410 RNA polymerase subunit sigma-24 no data 45 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 44 85
  Serratia liquefaciens MT49 IAI46_22980 RNA polymerase sigma factor insig. 44 76
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06547 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 94
  Paraburkholderia graminis OAS925 ABIE53_006215 RNA polymerase sigma-70 factor (ECF subfamily) insig. 39 94
  Bosea sp. OAE506 ABIE41_RS04095 sigma-70 family RNA polymerase sigma factor strong 43 86
  Phaeobacter inhibens DSM 17395 PGA1_78p00070 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' no data 42 82
  Agrobacterium fabrum C58 Atu4160 RNA polymerase sigma factor strong 43 86
  Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 47 81
  Azospirillum sp. SherDot2 MPMX19_01371 hypothetical protein insig. 47 80
  Paraburkholderia graminis OAS925 ABIE53_003943 RNA polymerase sigma-70 factor (ECF subfamily) sig. 42 85
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 42 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05041 RNA polymerase sigma-70 factor, ECF subfamily insig. 40 85
o Dickeya dadantii 3937 DDA3937_RS11055 sigma-70 family RNA polymerase sigma factor insig. 37 92
o Dickeya dianthicola 67-19 HGI48_RS11075 sigma-70 family RNA polymerase sigma factor insig. 37 92
  Sinorhizobium meliloti 1021 SMc02713 RNA polymerase sigma-E factor (sigma-24) protein strong 41 87
  Sphingobium sp. HT1-2 GFF2317 RNA polymerase ECF-type sigma factor cofit 41 82
o Enterobacter sp. TBS_079 MPMX20_03520 ECF RNA polymerase sigma factor EcfG insig. 39 82
  Azospirillum sp. SherDot2 MPMX19_05043 hypothetical protein insig. 42 77
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 41 84
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3853 RNA polymerase sigma factor, sigma-70 family insig. 40 87
  Paraburkholderia graminis OAS925 ABIE53_003919 RNA polymerase sigma-70 factor (ECF subfamily) insig. 38 88
  Dinoroseobacter shibae DFL-12 Dshi_3835 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 41 89
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3492 RNA polymerase sigma factor, sigma-70 family strong 40 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1191 RNA polymerase sigma factor, sigma-70 family insig. 42 81
  Sphingobium sp. HT1-2 GFF4975 RNA polymerase ECF-type sigma factor cofit 40 83
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 41 82
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02635 RNA polymerase sigma factor insig. 44 84
  Sinorhizobium meliloti 1021 SMc01506 RNA polymerase sigma factor strong 40 89
  Rhizobium sp. OAE497 ABIE40_RS03400 RNA polymerase sigma factor insig. 40 79
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3977 RNA polymerase sigma-54 factor RpoN insig. 42 87
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2582 RNA polymerase sigma-54 factor RpoN insig. 44 86
  Xanthobacter sp. DMC5 GFF2321 ECF RNA polymerase sigma factor EcfG no data 40 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS32245 RNA polymerase sigma factor insig. 40 91
  Agrobacterium fabrum C58 Atu1485 ECF family sigma factor insig. 39 87
o Alteromonas macleodii MIT1002 MIT1002_03872 RNA polymerase sigma factor SigM insig. 38 85
o Pseudomonas sp. DMC3 GFF1465 ECF RNA polymerase sigma factor EcfG insig. 43 86
  Rhodopseudomonas palustris CGA009 TX73_021900 sigma-70 family RNA polymerase sigma factor strong 39 83
o Pseudomonas fluorescens FW300-N2C3 AO356_01625 RNA polymerase subunit sigma-24 insig. 40 91
  Caulobacter crescentus NA1000 CCNA_02977 RNA polymerase ECF-type sigma factor sigU strong 39 83
  Caulobacter crescentus NA1000 Δfur CCNA_02977 RNA polymerase ECF-type sigma factor sigU cofit 39 83
  Variovorax sp. SCN45 GFF215 RNA polymerase sigma-54 factor RpoN insig. 42 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2200 RNA polymerase sigma-54 factor RpoN sig. 40 90
  Sphingobium sp. HT1-2 GFF2028 hypothetical protein cofit 39 88
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF329 RNA polymerase sigma-54 factor RpoN insig. 42 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01554 RNA polymerase sigma-70 factor, ECF subfamily insig. 40 81
  Rahnella sp. WP5 EX31_RS05375 sigma-70 family RNA polymerase sigma factor insig. 39 88
  Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 39 92
o Pseudomonas fluorescens FW300-N2E3 AO353_20305 RNA polymerase subunit sigma-24 no data 42 86
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 40 81
o Variovorax sp. OAS795 ABID97_RS16445 sigma-70 family RNA polymerase sigma factor no data 41 81
  Pseudomonas sp. RS175 PFR28_01251 ECF RNA polymerase sigma factor EcfG insig. 41 86
o Pseudomonas orientalis W4I3 QF045_RS18740 sigma-70 family RNA polymerase sigma factor insig. 43 86
o Pseudomonas simiae WCS417 PS417_17070 RNA polymerase subunit sigma-24 insig. 44 86
  Pantoea sp. MT58 IAI47_21640 sigma-70 family RNA polymerase sigma factor insig. 35 78
o Ralstonia solanacearum GMI1000 RS_RS14950 RNA polymerase sigma factor no data 40 84
o Pseudomonas fluorescens SBW25 PFLU_RS19010 sigma-70 family RNA polymerase sigma factor insig. 43 86
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19010 sigma-70 family RNA polymerase sigma factor sig. 43 86
  Rhizobium sp. OAE497 ABIE40_RS22730 RNA polymerase sigma factor insig. 40 85
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12225 RNA polymerase sigma factor cofit 37 78
o Ralstonia solanacearum PSI07 RPSI07_RS10230 RNA polymerase sigma factor no data 39 94
  Azospirillum brasilense Sp245 AZOBR_RS23735 RNA polymerase no data 40 80
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03722 ECF RNA polymerase sigma factor EcfG no data 43 86
o Pseudomonas sp. SVBP6 COO64_RS10855 sigma-70 family RNA polymerase sigma factor insig. 45 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05043 RNA polymerase sigma-70 factor, ECF subfamily no data 39 85
  Sphingobium sp. HT1-2 GFF5325 RNA polymerase ECF-type sigma factor cofit 39 81
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07010 RNA polymerase sigma factor no data 38 94
o Ralstonia solanacearum UW163 UW163_RS06605 RNA polymerase sigma factor no data 38 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19215 RNA polymerase subunit sigma sig. 37 83
  Rhizobium sp. OAE497 ABIE40_RS13310 RNA polymerase sigma factor insig. 36 87
  Azospirillum sp. SherDot2 MPMX19_00923 hypothetical protein insig. 40 86
o Magnetospirillum magneticum AMB-1 AMB_RS13315 hypothetical protein insig. 42 82
o Phocaeicola dorei CL03T12C01 ABI39_RS07815 RNA polymerase sigma factor strong 34 85
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12805 RNA polymerase sigma factor strong 34 85
  Sphingobium sp. HT1-2 GFF4551 hypothetical protein cofit 40 81
o Dechlorosoma suillum PS Dsui_1302 RNA polymerase sigma factor, sigma-70 family cofit 41 87
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14775 sigma-70 family RNA polymerase sigma factor strong 38 82
  Phaeobacter inhibens DSM 17395 PGA1_c27070 RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) insig. 37 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS36705 RNA polymerase sigma factor insig. 36 85
  Azospirillum brasilense Sp245 AZOBR_RS11020 RNA polymerase subunit sigma-70 no data 39 79
  Azospirillum brasilense Sp245 AZOBR_RS14755 RNA polymerase sigma-70 factor insig. 39 82
  Azospirillum sp. SherDot2 MPMX19_01197 ECF RNA polymerase sigma factor EcfG insig. 37 82
  Bacteroides stercoris CC31F HMPREF1181_RS16950 RNA polymerase sigma factor strong 34 83
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4350 RNA polymerase sigma-54 factor RpoN insig. 40 82
  Pseudomonas sp. BP01 JOY50_RS05860 sigma-70 family RNA polymerase sigma factor no data 40 82
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3411 RNA polymerase sigma factor, sigma-70 family insig. 39 79
  Rhodospirillum rubrum S1H Rru_A3287 Sigma-24 (FecI) (NCBI) no data 38 82
  Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 37 78
  Herbaspirillum seropedicae SmR1 HSERO_RS13530 RNA polymerase subunit sigma-24 no data 45 82
  Caulobacter crescentus NA1000 CCNA_03589 RNA polymerase EcfG family sigma factor sigT strong 37 82
  Caulobacter crescentus NA1000 Δfur CCNA_03589 RNA polymerase EcfG family sigma factor sigT cofit 37 82
  Bacteroides ovatus ATCC 8483 BACOVA_04312 Sigma-70 region 2 insig. 32 86
  Pseudomonas putida KT2440 PP_2888 putative ECF sigma factor PrtI no data 39 82
  Sinorhizobium meliloti 1021 SMc01419 RNA polymerase sigma factor protein sig. 37 85
  Bacteroides thetaiotaomicron VPI-5482 BT3457 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 34 79
  Ralstonia sp. UNC404CL21Col ABZR87_RS02660 RNA polymerase sigma factor insig. 35 84
  Bacteroides thetaiotaomicron VPI-5482 BT1197 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 34 79
  Bacteroides stercoris CC31F HMPREF1181_RS02840 RNA polymerase sigma factor sig. 33 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS22515 RNA polymerase sigma factor insig. 39 91
  Bacteroides ovatus ATCC 8483 BACOVA_02205 Sigma-70 region 2 sig. 34 79
  Bacteroides ovatus ATCC 8483 BACOVA_03979 Sigma-70 region 2 strong 33 79
  Bacteroides ovatus ATCC 8483 BACOVA_01848 Sigma-70 region 2 strong 33 79
  Bacteroides thetaiotaomicron VPI-5482 BT2569 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 32 79
  Cupriavidus basilensis FW507-4G11 RR42_RS19070 DNA-directed RNA polymerase sigma-70 factor insig. 36 92
  Bacteroides thetaiotaomicron VPI-5482 BT1572 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 33 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24230 RNA polymerase sigma factor strong 33 77
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09585 RNA polymerase sigma factor no data 42 71
  Phocaeicola dorei CL03T12C01 ABI39_RS17450 RNA polymerase sigma factor strong 33 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03770 RNA polymerase sigma factor strong 33 78
  Rhizobium sp. OAE497 ABIE40_RS27415 sigma-70 family RNA polymerase sigma factor insig. 32 90
  Paraburkholderia graminis OAS925 ABIE53_002003 RNA polymerase sigma factor (sigma-70 family) sig. 40 82
  Bifidobacterium breve UCC2003 BBR_RS16820 RNA polymerase sigma factor RpoE strong 33 82
  Rhodanobacter sp. FW510-T8 OKGIIK_06725 rpoE RNA polymerase subunit sigma-70 insig. 41 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00565 RNA polymerase sigma factor insig. 42 66
  Rhodanobacter denitrificans MT42 LRK55_RS00300 RNA polymerase sigma factor insig. 41 71
  Sinorhizobium meliloti 1021 SM_b21484 RNA polymerase sigma-E factor (sigma-24) protein insig. 38 83
  Burkholderia phytofirmans PsJN BPHYT_RS08845 RNA polymerase sigma factor insig. 38 87
  Sinorhizobium meliloti 1021 SMc04051 RNA polymerase sigma-E factor (sigma-24) protein insig. 36 87
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 38 71
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16550 RNA polymerase sigma factor strong 29 80
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 33 83
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11995 RNA polymerase subunit sigma insig. 30 80
  Rhizobium sp. OAE497 ABIE40_RS15675 sigma-70 family RNA polymerase sigma factor insig. 36 83
  Rhizobium sp. OAE497 ABIE40_RS11455 RNA polymerase sigma factor insig. 34 84
  Rhizobium sp. OAE497 ABIE40_RS21790 sigma-70 family RNA polymerase sigma factor cofit 35 87
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07040 RNA polymerase sigma factor insig. 35 80
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 39 83
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15765 RNA polymerase sigma factor strong 28 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS23395 RNA polymerase sigma factor insig. 40 79
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 35 77
  Shewanella amazonensis SB2B Sama_2036 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 33 77
  Bacteroides thetaiotaomicron VPI-5482 BT2383 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 30 79
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 33 81
  Agrobacterium fabrum C58 Atu5490 ECF family RNA polymerase sigma factor insig. 35 79
  Ralstonia solanacearum GMI1000 RS_RS25030 RNA polymerase sigma factor insig. 36 79
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02732 RNA polymerase sigma-70 factor, ECF subfamily insig. 37 80
  Variovorax sp. SCN45 GFF4544 RNA polymerase sigma factor RpoE insig. 34 83
  Shewanella sp. ANA-3 Shewana3_2465 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 32 81
  Castellaniella sp019104865 MT123 ABCV34_RS11175 sigma-70 family RNA polymerase sigma factor insig. 32 74
  Paraburkholderia graminis OAS925 ABIE53_005321 RNA polymerase sigma factor (sigma-70 family) sig. 37 83
  Bacteroides stercoris CC31F HMPREF1181_RS08110 sigma-70 family RNA polymerase sigma factor insig. 29 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10915 RNA polymerase subunit sigma strong 28 93
  Ralstonia solanacearum PSI07 RPSI07_RS07750 RNA polymerase sigma factor insig. 35 82
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 31 79
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00795 sigma-70 family RNA polymerase sigma factor strong 27 91
  Xanthobacter sp. DMC5 GFF1190 ECF RNA polymerase sigma factor SigR insig. 35 82
  Rhodospirillum rubrum S1H Rru_A0722 Sigma-24 (FecI) (NCBI) insig. 35 77
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01799 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 34 77
  Shewanella oneidensis MR-1 SO1986 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 32 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05410 RNA polymerase sigma factor strong 28 78
  Burkholderia phytofirmans PsJN BPHYT_RS24975 RNA polymerase sigma24 factor strong 36 83
  Xanthobacter sp. DMC5 GFF1406 RNA polymerase sigma-H factor insig. 34 84
  Herbaspirillum seropedicae SmR1 HSERO_RS03905 RNA polymerase subunit sigma-24 insig. 31 87
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 35 81
  Agrobacterium fabrum C58 Atu2030 ECF family sigma factor insig. 35 71
  Variovorax sp. SCN45 GFF5806 RNA polymerase ECF-type sigma factor insig. 38 73
  Cupriavidus basilensis FW507-4G11 RR42_RS05810 RNA polymerase sigma factor insig. 33 80
  Vibrio cholerae E7946 ATCC 55056 CSW01_11715 RNA polymerase subunit sigma insig. 33 77
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1476 RNA polymerase sigma factor, sigma-70 family insig. 27 84
  Rhodanobacter denitrificans MT42 LRK55_RS07240 sigma-70 family RNA polymerase sigma factor insig. 29 86
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10790 RNA polymerase sigma factor insig. 34 80
  Agrobacterium fabrum C58 Atu3084 RNA polymerase sigma factor insig. 32 81
  Bacteroides thetaiotaomicron VPI-5482 BT2044 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 29 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23375 RNA polymerase sigma factor insig. 38 79
  Ralstonia solanacearum UW163 UW163_RS16625 RNA polymerase sigma factor insig. 38 79
  Dickeya dadantii 3937 DDA3937_RS11655 sigma-70 family RNA polymerase sigma factor insig. 31 80
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma insig. 32 83
  Shewanella sp. ANA-3 Shewana3_3152 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) cofit 32 79
  Dickeya dianthicola 67-19 HGI48_RS11715 RNA polymerase sigma factor insig. 31 80
  Dickeya dianthicola ME23 DZA65_RS12200 RNA polymerase sigma factor insig. 31 80
  Vibrio cholerae E7946 ATCC 55056 CSW01_05315 RNA polymerase subunit sigma insig. 32 89
  Pseudomonas fluorescens FW300-N2E3 AO353_21275 RNA polymerase subunit sigma insig. 32 79
  Shewanella loihica PV-4 Shew_1476 RNA polymerase sigma factor (RefSeq) insig. 31 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00665 RNA polymerase subunit sigma-24 strong 28 77
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04435 RNA polymerase sigma factor insig. 27 84
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 33 80
  Alteromonas macleodii MIT1002 MIT1002_02719 Sigma-24 no data 32 72
  Shewanella loihica PV-4 Shew_2433 RNA polymerase sigma factor (RefSeq) no data 31 96
  Pseudomonas syringae pv. syringae B728a Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 30 76
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 30 76
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor insig. 27 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2959 RNA polymerase sigma-54 factor RpoN insig. 39 52
  Cupriavidus basilensis FW507-4G11 RR42_RS04015 RNA polymerase sigma factor insig. 34 74
  Vibrio cholerae E7946 ATCC 55056 CSW01_12485 RNA polymerase sigma factor RpoE no data 33 74
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2952 RNA polymerase sigma factor, sigma-70 family strong 33 88
  Pseudomonas orientalis W4I3 QF045_RS03845 RNA polymerase sigma factor insig. 31 82
  Pectobacterium carotovorum WPP14 HER17_RS10020 RNA polymerase sigma factor insig. 31 81
  Shewanella sp. ANA-3 Shewana3_1453 RNA polymerase sigma factor (RefSeq) sig. 32 88
  Shewanella oneidensis MR-1 SO3551 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 31 79
  Cupriavidus basilensis FW507-4G11 RR42_RS16520 RNA polymerase sigma factor insig. 39 71
  Pseudomonas simiae WCS417 PS417_03450 RNA polymerase sigma factor insig. 35 81
  Serratia liquefaciens MT49 IAI46_19585 RNA polymerase sigma factor RpoE no data 31 69
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13970 RNA polymerase sigma factor cofit 28 77
  Pseudomonas fluorescens SBW25 PFLU_RS03525 RNA polymerase sigma factor insig. 35 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03525 RNA polymerase sigma factor insig. 35 81
  Dinoroseobacter shibae DFL-12 Dshi_2428 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 28 77
  Phocaeicola dorei CL03T12C01 ABI39_RS09920 sigma-70 family RNA polymerase sigma factor insig. 26 80
  Rhizobium sp. OAE497 ABIE40_RS26955 sigma-70 family RNA polymerase sigma factor insig. 31 76
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16675 hypothetical protein insig. 28 74
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02674 hypothetical protein cofit 36 88
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 35 73
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 35 73
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 35 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 35 73
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23205 hypothetical protein insig. 26 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2047 RNA polymerase sigma factor, sigma-70 family strong 30 74
  Pseudomonas fluorescens FW300-N2C3 AO356_10740 RNA polymerase subunit sigma insig. 31 78
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 31 77
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00655 RNA polymerase subunit sigma-24 strong 27 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12270 RNA polymerase subunit sigma insig. 25 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00902 ECF RNA polymerase sigma factor SigC insig. 35 78
  Erwinia amylovora T8 OLJFJH_10215 RNA polymerase sigma factor RpoE strong 32 69
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14290 sigma-70 family RNA polymerase sigma factor insig. 26 80
  Lysobacter sp. OAE881 ABIE51_RS13770 RNA polymerase sigma factor insig. 38 69
  Rahnella sp. WP5 EX31_RS21800 RNA polymerase sigma factor RpoE no data 31 69
  Pectobacterium carotovorum WPP14 HER17_RS05780 RNA polymerase sigma factor RpoE no data 31 69
  Pseudomonas orientalis W4I3 QF045_RS06435 RNA polymerase sigma factor insig. 33 78
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 33 71
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4018 RNA polymerase sigma-E factor insig. 31 78
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00075 RNA polymerase sigma factor cofit 29 77
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0726 RNA polymerase sigma factor, sigma-70 family insig. 32 79
  Shewanella amazonensis SB2B Sama_2175 RNA polymerase sigma factor (RefSeq) strong 30 89
  Dickeya dianthicola 67-19 HGI48_RS15850 RNA polymerase sigma factor RpoE cofit 31 69
  Dickeya dianthicola ME23 DZA65_RS16930 RNA polymerase sigma factor RpoE strong 31 69
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_05665 RNA polymerase subunit sigma strong 29 81
  Pseudomonas simiae WCS417 PS417_11995 RNA polymerase sigma factor insig. 33 93
  Caulobacter crescentus NA1000 CCNA_02837 RNA polymerase ECF-type sigma factor insig. 32 80
  Caulobacter crescentus NA1000 Δfur CCNA_02837 RNA polymerase ECF-type sigma factor cofit 32 80
  Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 35 71
  Rhodopseudomonas palustris CGA009 TX73_023085 RNA polymerase sigma factor cofit 33 84
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 30 81
  Sphingobium sp. HT1-2 GFF4091 hypothetical protein insig. 29 79
  Pseudomonas fluorescens SBW25 PFLU_RS00840 RNA polymerase sigma factor insig. 30 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00840 RNA polymerase sigma factor sig. 30 78
  Alteromonas macleodii MIT1002 MIT1002_02682 Sigma-W factor strong 30 76
  Paraburkholderia sabiae LMG 24235 QEN71_RS16180 RNA polymerase sigma factor insig. 34 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00391 RNA polymerase sigma-H factor cofit 29 82
  Erwinia amylovora T8 OLJFJH_08135 RNA polymerase subunit sigma strong 29 81
  Castellaniella sp019104865 MT123 ABCV34_RS08355 RNA polymerase sigma factor RpoE strong 34 71
  Shewanella loihica PV-4 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) cofit 32 72