Homologs of Rv1008 from Mycobacterium tuberculosis H37Rv

Probable deoxyribonuclease TatD (YJJV protein)
SEED: Putative deoxyribonuclease YcfH
KEGG: TatD DNase family protein

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Mycobacterium tuberculosis H37Rv Rv1008 Probable deoxyribonuclease TatD (YJJV protein) insig. 100 100
o Sinorhizobium meliloti 1021 SMc01193 hypothetical protein cofit 39 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00931 TatD DNase family protein insig. 38 98
o Acinetobacter radioresistens SK82 MPMX26_01224 putative metal-dependent hydrolase YcfH insig. 38 95
o Magnetospirillum magneticum AMB-1 AMB_RS12295 TatD family deoxyribonuclease insig. 39 97
o Burkholderia phytofirmans PsJN BPHYT_RS09640 DNAase cofit 38 98
o Paraburkholderia graminis OAS925 ABIE53_002166 TatD DNase family protein insig. 37 98
o Dechlorosoma suillum PS Dsui_2652 hydrolase, TatD family cofit 38 97
o Azospirillum sp. SherDot2 MPMX19_01469 putative metal-dependent hydrolase YcfH cofit 38 97
o Bosea sp. OAE506 ABIE41_RS15945 TatD family hydrolase insig. 40 97
o Marinobacter adhaerens HP15 HP15_3420 hydrolase, TatD family sig. 33 98
o Azospirillum brasilense Sp245 AZOBR_RS08795 LuxR family transcriptional regulator sig. 37 97
o Herbaspirillum seropedicae SmR1 HSERO_RS12995 DNAase insig. 36 98
o Shewanella loihica PV-4 Shew_1582 TatD family hydrolase (RefSeq) insig. 36 97
o Kangiella aquimarina DSM 16071 B158DRAFT_1745 hydrolase, TatD family insig. 35 98
o Shewanella amazonensis SB2B Sama_2040 TatD family hydrolase (RefSeq) insig. 38 95
o Phaeobacter inhibens DSM 17395 PGA1_c07990 putative hydrolase, TatD family sig. 39 97
o Agrobacterium fabrum C58 Atu1495 hypothetical protein strong 37 98
o Ralstonia solanacearum GMI1000 RS_RS09020 TatD family deoxyribonuclease sig. 37 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS21805 TatD family hydrolase cofit 37 98
o Bifidobacterium breve UCC2003 BBR_RS19840 TatD family deoxyribonuclease sig. 36 91
o Rhodopseudomonas palustris CGA009 TX73_014390 TatD family hydrolase insig. 36 98
o Fusobacterium nucleatum SB010 HUW76_08855 TatD family hydrolase strong 32 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_10060 YchF/TatD family DNA exonuclease insig. 37 97
o Rahnella sp. WP5 EX31_RS24470 metal-dependent hydrolase insig. 36 97
o Shewanella sp. ANA-3 Shewana3_1769 TatD family hydrolase (RefSeq) insig. 36 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2112 Putative deoxyribonuclease YcfH insig. 37 100
o Pseudomonas sp. RS175 PFR28_03002 putative metal-dependent hydrolase YcfH insig. 38 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01010 TatD family deoxyribonuclease strong 38 95
o Ralstonia solanacearum PSI07 RPSI07_RS16465 TatD family deoxyribonuclease cofit 38 95
o Ralstonia solanacearum UW163 UW163_RS14320 TatD family deoxyribonuclease insig. 38 95
o Cupriavidus basilensis FW507-4G11 RR42_RS10885 DNAase sig. 38 97
o Pseudomonas putida KT2440 PP_1967 tRNA D-aminoacylase insig. 37 98
o Variovorax sp. SCN45 GFF34 Uncharacterized metal-dependent hydrolase YcfH insig. 36 95
o Pseudomonas fluorescens FW300-N2C3 AO356_20205 hydrolase TatD insig. 38 100
o Pseudomonas fluorescens FW300-N2E3 AO353_01325 hydrolase TatD insig. 37 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5960 Putative deoxyribonuclease YcfH sig. 38 100
o Desulfovibrio vulgaris Miyazaki F DvMF_2230 hydrolase, TatD family (RefSeq) sig. 39 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_420 Putative deoxyribonuclease YcfH insig. 37 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0126 hydrolase, TatD family insig. 35 95
o Pseudomonas fluorescens SBW25 PFLU_RS23020 TatD family hydrolase insig. 37 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23020 TatD family hydrolase insig. 37 98
o Pseudomonas sp. S08-1 OH686_22180 Uncharacterized metal-dependent hydrolase YcfH insig. 37 98
o Pseudomonas stutzeri RCH2 Psest_1696 hydrolase, TatD family sig. 36 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS12460 TatD family hydrolase insig. 37 95
o Enterobacter sp. TBS_079 MPMX20_01780 putative metal-dependent hydrolase YcfH insig. 37 95
o Enterobacter asburiae PDN3 EX28DRAFT_1829 hydrolase, TatD family insig. 36 95
o Rhizobium sp. OAE497 ABIE40_RS09480 TatD family hydrolase insig. 37 97
o Shewanella oneidensis MR-1 SO2610 hydrolase, TatD family (NCBI ptt file) insig. 35 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3382 Putative deoxyribonuclease YcfH insig. 36 100
o Variovorax sp. OAS795 ABID97_RS16000 TatD family hydrolase insig. 35 95
o Erwinia tracheiphila SCR3 LU632_RS14785 metal-dependent hydrolase insig. 35 100
o Escherichia coli BL21 ECD_01096 putative DNase insig. 36 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02566 putative metal-dependent hydrolase YcfH insig. 36 100
o Dinoroseobacter shibae DFL-12 Dshi_0920 hydrolase, TatD family (RefSeq) insig. 39 98
o Pseudomonas simiae WCS417 PS417_21405 hydrolase TatD insig. 36 98
o Acidovorax sp. GW101-3H11 Ac3H11_2488 Putative deoxyribonuclease YcfH insig. 34 97
o Escherichia coli ECOR38 HEPCGN_23940 ycfH metal-dependent hydrolase cofit 36 100
o Escherichia coli ECRC101 OKFHMN_03540 ycfH metal-dependent hydrolase insig. 36 100
o Escherichia coli ECRC101 MCAODC_22900 ycfH metal-dependent hydrolase insig. 36 100
o Escherichia coli ECRC102 NIAGMN_24290 ycfH metal-dependent hydrolase insig. 36 100
o Escherichia coli ECRC62 BNILDI_19230 ycfH metal-dependent hydrolase insig. 36 100
o Escherichia coli ECRC98 JDDGAC_07200 ycfH metal-dependent hydrolase no data 36 100
o Escherichia coli ECRC99 KEDOAH_24215 ycfH metal-dependent hydrolase no data 36 100
o Escherichia coli Nissle 1917 ECOLIN_RS06350 metal-dependent hydrolase insig. 36 100
o Escherichia coli BW25113 b1100 ycfH predicted metallodependent hydrolase (NCBI) insig. 36 100
o Serratia liquefaciens MT49 IAI46_09825 metal-dependent hydrolase insig. 36 97
o Escherichia coli ECOR27 NOLOHH_21070 ycfH metal-dependent hydrolase no data 37 97
o Klebsiella michiganensis M5al BWI76_RS11125 metal-dependent hydrolase strong 36 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4665 Putative deoxyribonuclease YcfH cofit 34 97
o Escherichia fergusonii Becca EFB2_02875 putative metal-dependent hydrolase YcfH insig. 36 100
o Rhodospirillum rubrum S1H Rru_A1700 TatD-related deoxyribonuclease (NCBI) sig. 37 95
o Pseudomonas syringae pv. syringae B728a Psyr_1655 TatD-related deoxyribonuclease insig. 35 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1655 TatD-related deoxyribonuclease insig. 35 100
o Dickeya dianthicola ME23 DZA65_RS13620 metal-dependent hydrolase insig. 35 100
o Dickeya dianthicola 67-19 HGI48_RS13150 metal-dependent hydrolase insig. 35 100
o Pectobacterium carotovorum WPP14 HER17_RS08685 metal-dependent hydrolase insig. 34 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU3202 hydrolase, TatD family (TIGR) sig. 33 98
o Dickeya dadantii 3937 DDA3937_RS13085 metal-dependent hydrolase insig. 35 100
o Alteromonas macleodii MIT1002 MIT1002_01740 putative deoxyribonuclease YcfH insig. 33 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04755 TatD family hydrolase insig. 34 95
o Pantoea sp. MT58 IAI47_12035 metal-dependent hydrolase insig. 35 95
o Castellaniella sp019104865 MT123 ABCV34_RS03960 TatD family hydrolase insig. 36 95
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25085 hydrolase TatD strong 30 98
o Caulobacter crescentus NA1000 CCNA_01898 Mg-dependent Dnase TatD strong 36 90
o Caulobacter crescentus NA1000 Δfur CCNA_01898 Mg-dependent Dnase TatD cofit 36 90
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03915 hydrolase TatD strong 32 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0081 hydrolase, TatD family sig. 27 98
o Lysobacter sp. OAE881 ABIE51_RS12580 TatD family hydrolase insig. 35 98
  Pseudomonas sp. S08-1 OH686_16550 Putative deoxyribonuclease YjjV insig. 32 98
  Dickeya dianthicola 67-19 HGI48_RS02415 TatD family hydrolase insig. 30 97
  Shewanella amazonensis SB2B Sama_3209 TatD family hydrolase (RefSeq) strong 32 91
o Bacteroides thetaiotaomicron VPI-5482 BT2056 conserved hypothetical protein (NCBI ptt file) sig. 30 98
o Bacteroides ovatus ATCC 8483 BACOVA_00646 hydrolase, TatD family strong 30 98
  Cupriavidus basilensis FW507-4G11 RR42_RS10765 hypothetical protein insig. 36 90
  Shewanella oneidensis MR-1 SO4206 hydrolase, TatD family (NCBI ptt file) strong 32 92
o Synechococcus elongatus PCC 7942 Synpcc7942_1521 tatD Sec-independent protein translocase TatD strong 33 98
  Dickeya dianthicola ME23 DZA65_RS02520 metal-dependent hydrolase insig. 30 97
o Bacteroides stercoris CC31F HMPREF1181_RS08245 TatD family hydrolase strong 30 98
o Rhodanobacter sp. FW510-T8 OKGIIK_08515 DNAase insig. 36 98