Homologs of RR42_RS03345 from Cupriavidus basilensis FW507-4G11

recombinase XerD
SEED: Tyrosine recombinase XerD
KEGG: integrase/recombinase XerD

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS03345 recombinase XerD sig. 100 100
o Ralstonia solanacearum PSI07 RPSI07_RS12160 site-specific tyrosine recombinase XerD insig. 75 95
o Ralstonia solanacearum GMI1000 RS_RS12755 tyrosine recombinase XerD no data 74 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05140 site-specific tyrosine recombinase XerD insig. 74 95
o Ralstonia solanacearum UW163 UW163_RS08485 site-specific tyrosine recombinase XerD insig. 74 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS00795 site-specific tyrosine recombinase XerD strong 75 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS02755 site-specific tyrosine recombinase XerD no data 69 99
o Paraburkholderia graminis OAS925 ABIE53_003361 integrase/recombinase XerD strong 67 98
o Burkholderia phytofirmans PsJN BPHYT_RS15950 tyrosine recombinase XerD sig. 67 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04126 integrase/recombinase XerD no data 67 98
o Herbaspirillum seropedicae SmR1 HSERO_RS04265 tyrosine recombinase XerD insig. 68 95
o Acidovorax sp. GW101-3H11 Ac3H11_302 Tyrosine recombinase XerD no data 68 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 64 94
o Variovorax sp. OAS795 ABID97_RS20265 site-specific tyrosine recombinase XerD insig. 66 95
o Castellaniella sp019104865 MT123 ABCV34_RS00515 site-specific tyrosine recombinase XerD insig. 63 95
o Variovorax sp. SCN45 GFF2772 Site-specific tyrosine recombinase XerD strong 65 95
o Methylophilus sp. DMC18 GFF2342 Tyrosine recombinase XerD insig. 56 95
o Marinobacter adhaerens HP15 HP15_762 site-specific tyrosine recombinase XerD insig. 55 96
o Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 57 96
o Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD sig. 56 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 57 96
o Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 57 96
o Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 57 96
o Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD cofit 57 96
o Escherichia coli ECRC100 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD cofit 57 96
o Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 57 96
o Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD cofit 57 96
o Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 57 96
o Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 57 96
o Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD strong 57 96
o Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 57 96
o Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 57 96
o Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 56 96
o Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 56 96
o Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 56 96
o Dechlorosoma suillum PS Dsui_1217 tyrosine recombinase XerD cofit 57 95
o Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 55 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 57 96
o Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 56 96
o Pectobacterium carotovorum WPP14 HER17_RS17890 site-specific tyrosine recombinase XerD strong 54 96
o Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 55 96
o Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 54 97
o Erwinia amylovora T8 OLJFJH_08835 site-specific tyrosine recombinase XerD strong 55 96
o Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 54 96
o Pseudomonas sp. SVBP6 COO64_RS04910 xerD site-specific tyrosine recombinase XerD sig. 55 95
o Pseudomonas stutzeri RCH2 Psest_3129 tyrosine recombinase XerD insig. 54 98
o Pseudomonas sp. BP01 JOY50_RS11700 xerD site-specific tyrosine recombinase XerD insig. 54 98
o Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 54 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 54 98
o Pseudomonas aeruginosa PA14 IKLFDK_19085 site-specific tyrosine recombinase XerD cofit 55 95
o Pseudomonas sp. DMC3 GFF1987 Tyrosine recombinase XerD insig. 53 98
o Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 54 98
o Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 54 97
  Dechlorosoma suillum PS Dsui_2597 tyrosine recombinase XerD cofit 51 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 53 98
o Pseudomonas syringae pv. syringae B728a Psyr_1286 tyrosine recombinase XerD subunit sig. 53 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1286 tyrosine recombinase XerD subunit sig. 53 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_12250 site-specific tyrosine recombinase XerD strong 52 98
o Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 53 96
o Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 53 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3145 Tyrosine recombinase XerD no data 53 98
o Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 53 98
o Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 52 98
o Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 48 96
o Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 53 98
o Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 52 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 52 98
o Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 52 95
o Shewanella amazonensis SB2B Sama_2739 integrase/recombinase XerD (RefSeq) strong 52 96
o Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 50 96
o Shewanella sp. ANA-3 Shewana3_3331 tyrosine recombinase XerD (RefSeq) strong 51 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4441.1 Tyrosine recombinase XerD sig. 51 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19225 site-specific tyrosine recombinase XerD strong 51 94
o Shewanella oneidensis MR-1 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) strong 50 95
o Rhodanobacter sp. FW510-T8 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD insig. 52 94
o Rhodanobacter denitrificans MT42 LRK55_RS04515 site-specific tyrosine recombinase XerD strong 51 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04735 site-specific tyrosine recombinase XerD insig. 51 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS05285 site-specific tyrosine recombinase XerD insig. 51 95
o Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 47 96
o Desulfovibrio vulgaris Hildenborough JW710 DVU1654 xerD site-specific recombinase, phage integrase family (TIGR) sig. 46 95
o Desulfovibrio vulgaris Miyazaki F DvMF_0359 tyrosine recombinase XerD (RefSeq) strong 45 95
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD sig. 37 95
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 40 95
o Bifidobacterium breve UCC2003 BBR_RS16755 site-specific tyrosine recombinase XerD strong 39 95
o Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 44 94
o Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD insig. 37 96
o Bacteroides thetaiotaomicron VPI-5482 BT2843 integrase (NCBI ptt file) strong 37 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.847.1 Site-specific tyrosine recombinase no data 37 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 35 96
  Lysobacter sp. OAE881 ABIE51_RS03035 tyrosine recombinase XerC strong 38 96
o Rhodopseudomonas palustris CGA009 TX73_002625 site-specific tyrosine recombinase XerD sig. 42 98
o Mycobacterium tuberculosis H37Rv Rv1701 Probable integrase/recombinase sig. 40 94
  Ralstonia solanacearum GMI1000 RS_RS17610 recombinase XerC insig. 40 92
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 38 94
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 36 95
o Bacteroides stercoris CC31F HMPREF1181_RS01250 site-specific tyrosine recombinase XerD insig. 36 96
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09680 site-specific tyrosine recombinase XerD strong 36 94
o Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 41 95
o Phocaeicola dorei CL03T12C01 ABI39_RS07000 site-specific tyrosine recombinase XerD sig. 35 94
  Ralstonia solanacearum UW163 UW163_RS23220 recombinase XerC insig. 38 92