Homologs of rsmB from Rhodanobacter sp. FW510-T8

rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
SEED: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Rhodanobacter sp. FW510-T8	OKGIIK_13790	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	100	100
o	Rhodanobacter sp000427505 FW510-R12	LRK53_RS02905		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	91	100
o	Rhodanobacter denitrificans MT42	LRK55_RS09765		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	91	100
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS10125		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	91	100
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS13890		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	77	99
o	Shewanella amazonensis SB2B	Sama_0041		sun protein (RefSeq)	strong	45	99
o	Pseudomonas stutzeri RCH2	Psest_0021		ribosomal RNA small subunit methyltransferase RsmB	sig.	47	95
o	Pseudomonas sp. BP01	JOY50_RS08250	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	47	91
o	Pseudomonas putida KT2440	PP_0066		Ribosomal RNA small subunit methyltransferase B	strong	47	91
o	Vibrio cholerae E7946 ATCC 55056	CSW01_00225		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	43	99
o	Pseudomonas syringae pv. syringae B728a	Psyr_0017		16S rRNA m(5)C-967 methyltransferase	insig.	47	91
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_0017		16S rRNA m(5)C-967 methyltransferase	insig.	47	91
o	Pseudomonas simiae WCS417	PS417_00085		16S rRNA methyltransferase	insig.	45	95
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_00223		Ribosomal RNA small subunit methyltransferase B	cofit	45	95
o	Kangiella aquimarina DSM 16071	B158DRAFT_0396		ribosomal RNA small subunit methyltransferase RsmB	insig.	41	98
o	Klebsiella pneumoniae MKP103	KDGMDA_06550		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	41	100
o	Erwinia tracheiphila HP pepo 2.2	IJEDHG_12470	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	41	99
o	Erwinia tracheiphila SCR3	LU632_RS22480	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	41	99
o	Pseudomonas sp. SVBP6	COO64_RS02215	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	45	91
o	Pseudomonas fluorescens SBW25	PFLU_RS00080		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	45	95
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS00080		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	strong	45	95
o	Pseudomonas aeruginosa PA14	IKLFDK_25475		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	strong	44	99
o	Lysobacter sp. OAE881	ABIE51_RS02255		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	45	99
o	Pseudomonas fluorescens FW300-N2E3	AO353_10630		16S rRNA methyltransferase	sig.	45	95
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_1914		Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)	sig.	44	95
o	Pseudomonas fluorescens FW300-N2C3	AO356_11275		16S rRNA methyltransferase	strong	45	95
o	Pseudomonas sp. DMC3	GFF590		Ribosomal RNA small subunit methyltransferase B	cofit	44	95
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_652		Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)	sig.	44	95
o	Pseudomonas sp. S08-1	OH686_12525		16S rRNA (cytosine(967)-C(5))-methyltransferase	cofit	45	95
o	Marinobacter adhaerens HP15	HP15_3742		Fmu, rRNA SAM-dependent methyltransferase	strong	42	98
o	Shewanella sp. ANA-3	Shewana3_0033		sun protein (RefSeq)	strong	42	99
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4121		Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)	strong	44	95
o	Erwinia amylovora T8	OLJFJH_03720		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	41	99
o	Serratia liquefaciens MT49	IAI46_23275		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	41	99
o	Escherichia coli ECOR27	NOLOHH_09320	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	sig.	40	99
o	Escherichia coli ECRC62	BNILDI_02200	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	40	99
o	Pantoea sp. MT58	IAI47_02280		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	41	99
o	Pantoea agglomerans CFBP13505 P0401	PagCFBP13505_RS22525		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	40	99
o	Escherichia coli BL21	ECD_03139		16S rRNA m(5)C967 methyltransferase, SAM-dependent	sig.	39	99
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00415		Ribosomal RNA small subunit methyltransferase B	strong	39	99
o	Escherichia coli BW25113	b3289	rsmB	16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI)	strong	39	99
o	Rahnella sp. WP5	EX31_RS15985		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	40	100
o	Escherichia coli ECOR38	HEPCGN_16350	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	39	99
o	Shewanella loihica PV-4	Shew_3738		sun protein (RefSeq)	strong	41	99
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF2390		16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967	cofit	40	100
o	Pseudomonas sp. RS175	PFR28_04663		Ribosomal RNA small subunit methyltransferase B	sig.	44	95
o	Escherichia coli ECRC100	OKFHMN_17520	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	39	99
o	Escherichia coli ECRC101	MCAODC_08050	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	sig.	39	99
o	Escherichia coli ECRC102	NIAGMN_15290	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	39	99
o	Escherichia coli ECRC98	JDDGAC_21150	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	39	99
o	Escherichia coli ECRC99	KEDOAH_10620	rsmB	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	no data	39	99
o	Pectobacterium carotovorum WPP14	HER17_RS02215		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	39	99
o	Dickeya dianthicola ME23	DZA65_RS20350		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	41	100
o	Dickeya dadantii 3937	DDA3937_RS19135		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	41	100
o	Dickeya dianthicola 67-19	HGI48_RS19225		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	41	100
o	Escherichia fergusonii Becca	EFB2_00535		Ribosomal RNA small subunit methyltransferase B	insig.	39	99
o	Escherichia coli Nissle 1917	ECOLIN_RS18875		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	39	99
o	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.4741.1		hypothetical protein	insig.	46	95
o	Enterobacter asburiae PDN3	EX28DRAFT_0039		16S rRNA (cytosine(967)-C(5))-methyltransferase	cofit	40	98
o	Shewanella oneidensis MR-1	SO0030	sun	sun protein (NCBI ptt file)	sig.	41	99
o	Klebsiella michiganensis M5al	BWI76_RS25680		16S rRNA m5C967 methyltransferase	strong	40	100
o	Enterobacter sp. TBS_079	MPMX20_04196		Ribosomal RNA small subunit methyltransferase B	sig.	39	98
o	Dechlorosoma suillum PS	Dsui_0812		ribosomal RNA small subunit methyltransferase RsmB	strong	47	85
o	Alteromonas macleodii MIT1002	MIT1002_00018		Ribosomal RNA small subunit methyltransferase B	cofit	40	99
o	Acinetobacter baumannii LAC-4	RR41_RS00120		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	sig.	39	99
	Castellaniella sp019104865 MT123	ABCV34_RS14225		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	47	78
	Burkholderia phytofirmans PsJN	BPHYT_RS01475		16S rRNA methyltransferase	insig.	47	78
o	Acinetobacter radioresistens SK82	MPMX26_03021		Ribosomal RNA small subunit methyltransferase B	insig.	39	95
	Paraburkholderia graminis OAS925	ABIE53_000392		16S rRNA (cytosine967-C5)-methyltransferase	insig.	46	78
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_02237		16S rRNA (cytosine967-C5)-methyltransferase	insig.	46	78
o	Ralstonia solanacearum PSI07	RPSI07_RS23575		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	45	85
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS04950		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	43	85
o	Methylophilus sp. DMC18	GFF1499		Ribosomal RNA small subunit methyltransferase B	insig.	42	78
	Paraburkholderia sabiae LMG 24235	QEN71_RS00175		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	46	78
o	Ralstonia solanacearum GMI1000	RS_RS00375		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	46	85
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS09790		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	44	85
o	Ralstonia solanacearum UW163	UW163_RS03790		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	insig.	44	85
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF1789		Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)	insig.	46	78
o	Acidovorax sp. GW101-3H11	Ac3H11_4461		Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)	strong	44	84
	Variovorax sp. SCN45	GFF5878		16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176)	insig.	45	78
	Cupriavidus basilensis FW507-4G11	RR42_RS20450		16S rRNA methyltransferase	strong	47	78
	Variovorax sp. OAS795	ABID97_RS05360		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	sig.	46	79
	Herbaspirillum seropedicae SmR1	HSERO_RS00355		methyltransferase	insig.	45	73
o	Azospirillum sp. SherDot2	MPMX19_02327		Ribosomal RNA small subunit methyltransferase B	insig.	36	99
o	Xanthobacter sp. DMC5	GFF3851		Ribosomal RNA small subunit methyltransferase B	no data	37	90
o	Azospirillum brasilense Sp245	AZOBR_RS00235		MFS transporter	sig.	37	85
o	Magnetospirillum magneticum AMB-1	AMB_RS00745		MFS transporter	insig.	36	97
o	Synechococcus elongatus PCC 7942	Synpcc7942_0962	sun	sun protein	sig.	35	91
o	Synechocystis sp000284455 PCC 6803	SGL_RS03855		16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	cofit	31	98
	Rhodopseudomonas palustris CGA009	TX73_000155		transcription antitermination factor NusB	insig.	37	81
	Caulobacter crescentus NA1000	CCNA_00101		16S rRNA m5C methyltransferase RsmB	sig.	39	84
	Caulobacter crescentus NA1000 Δfur	CCNA_00101		16S rRNA m5C methyltransferase RsmB	cofit	39	84
o	Bosea sp. OAE506	ABIE41_RS05105		RsmB/NOP family class I SAM-dependent RNA methyltransferase	insig.	34	90
	Rhizobium sp. OAE497	ABIE40_RS19140		RsmB/NOP family class I SAM-dependent RNA methyltransferase	insig.	33	81
o	Sinorhizobium meliloti 1021	SMc04090		sun protein	insig.	33	99
o	Agrobacterium fabrum C58	Atu2825		Sun protein	sig.	31	91
o	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1161		tRNA and rRNA cytosine-C5-methylases	insig.	29	91
o	Phaeobacter inhibens DSM 17395	PGA1_c32880		putative ribosomal RNA small subunit methyltransferase B	sig.	33	85
o	Dinoroseobacter shibae DFL-12	Dshi_3033		Fmu (Sun) domain protein (RefSeq)	sig.	35	87
o	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS13165		RsmB/NOP family class I SAM-dependent RNA methyltransferase	insig.	33	86