Homologs of LRK53_RS04060 from Rhodanobacter sp000427505 FW510-R12

ribosome small subunit-dependent GTPase A
SEED: Probable GTPase related to EngC
KEGG: ribosome biogenesis GTPase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04060 ribosome small subunit-dependent GTPase A no data 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS10865 ribosome small subunit-dependent GTPase A no data 92 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11160 ribosome small subunit-dependent GTPase A no data 92 100
o Rhodanobacter sp. FW510-T8 OKGIIK_12715 rsgA ribosome small subunit-dependent GTPase A no data 89 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12430 ribosome small subunit-dependent GTPase A no data 84 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1013.1 Probable GTPase related to EngC no data 54 89
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10940 ribosome small subunit-dependent GTPase A insig. 44 84
o Marinobacter adhaerens HP15 HP15_2721 ribosome-associated GTPase insig. 40 87
  Bosea sp. OAE506 ABIE41_RS16730 ribosome small subunit-dependent GTPase A insig. 46 75
o Desulfovibrio vulgaris Hildenborough JW710 DVU2218 GTP-binding protein, putative (TIGR) insig. 39 88
o Phaeobacter inhibens DSM 17395 PGA1_c10970 ribosome small subunit-dependent GTPase A sig. 37 92
o Bacteroides ovatus ATCC 8483 BACOVA_00847 putative ribosome small subunit-dependent GTPase A insig. 31 95
o Desulfovibrio vulgaris Miyazaki F DvMF_1486 GTPase EngC (RefSeq) insig. 36 92
o Bacteroides thetaiotaomicron VPI-5482 BT1190 putative ATP GTP-binding protein (NCBI ptt file) insig. 32 87
  Shewanella loihica PV-4 Shew_0558 ribosome-associated GTPase (RefSeq) no data 36 62
  Shewanella oneidensis MR-1 SO0591 conserved hypothetical protein TIGR00157 (NCBI ptt file) no data 35 62
  Shewanella sp. ANA-3 Shewana3_0589 ribosome-associated GTPase (RefSeq) no data 35 67
  Shewanella amazonensis SB2B Sama_3033 ribosome-associated GTPase (RefSeq) no data 35 62
o Dechlorosoma suillum PS Dsui_3225 ribosome small subunit-dependent GTPase A no data 35 82
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20340 ribosome small subunit-dependent GTPase A no data 32 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23860 ribosome small subunit-dependent GTPase A no data 31 75
  Ralstonia solanacearum PSI07 RPSI07_RS19530 ribosome small subunit-dependent GTPase A no data 33 72
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1834 ribosome small subunit-dependent GTPase A no data 29 82
  Cellulophaga baltica 18 M666_RS08265 ribosome small subunit-dependent GTPase A no data 30 80
  Phocaeicola dorei CL03T12C01 ABI39_RS09450 ribosome small subunit-dependent GTPase A no data 27 76
  Kangiella aquimarina DSM 16071 B158DRAFT_1944 ribosome small subunit-dependent GTPase A strong 36 68
  Marinobacter adhaerens HP15 HP15_2507 ribosome-associated GTPase no data 34 77
  Ralstonia solanacearum GMI1000 RS_RS04675 GTPase RsgA no data 34 68
  Herbaspirillum seropedicae SmR1 HSERO_RS07195 GTPase RsgA no data 33 66
  Pseudomonas sp. BP01 JOY50_RS17185 rsgA small ribosomal subunit biogenesis GTPase RsgA insig. 34 66
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13840 ribosome small subunit-dependent GTPase A no data 27 76
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05190 ribosome small subunit-dependent GTPase A no data 27 78
  Alteromonas macleodii MIT1002 MIT1002_00495 Putative ribosome biogenesis GTPase RsgA no data 32 76
  Klebsiella pneumoniae MKP103 KDGMDA_10975 small ribosomal subunit biogenesis GTPase RsgA no data 30 65
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00360 ribosome small subunit-dependent GTPase A no data 30 81
  Bacteroides ovatus ATCC 8483 BACOVA_03093 ribosome small subunit-dependent GTPase A no data 28 79
  Bacteroides thetaiotaomicron VPI-5482 BT2250 putative GTPase (NCBI ptt file) no data 27 79
  Ralstonia sp. UNC404CL21Col ABZR87_RS09635 ribosome small subunit-dependent GTPase A insig. 32 68
  Escherichia coli BL21 ECD_04031 ribosome small subunit-dependent GTPase A no data 30 71
  Escherichia fergusonii Becca EFB2_04374 Small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Escherichia coli ECOR27 NOLOHH_04580 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Escherichia coli ECOR38 HEPCGN_10545 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Escherichia coli ECRC101 MCAODC_02830 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Escherichia coli ECRC102 NIAGMN_10165 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Escherichia coli ECRC62 BNILDI_06910 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Escherichia coli ECRC98 JDDGAC_15955 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Escherichia coli ECRC99 KEDOAH_15845 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03881 Small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Escherichia coli Nissle 1917 ECOLIN_RS24175 small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Pseudomonas fluorescens GW456-L13 PfGW456L13_163 Ribosome small subunit-stimulated GTPase EngC no data 35 66
  Pseudomonas putida KT2440 PP_4903 Putative ribosome biogenesis GTPase RsgA no data 34 66
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS13940 ribosome small subunit-dependent GTPase A no data 33 72
  Ralstonia solanacearum UW163 UW163_RS15870 ribosome small subunit-dependent GTPase A no data 33 72
  Escherichia coli ECRC100 OKFHMN_12320 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 30 71
  Escherichia coli BW25113 b4161 yjeQ orf, hypothetical protein (VIMSS) no data 30 71
  Pseudomonas fluorescens FW300-N2E3 AO353_13100 GTPase RsgA insig. 35 66
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1421 Ribosome small subunit-stimulated GTPase EngC no data 35 66
  Methylophilus sp. DMC18 GFF1170 Small ribosomal subunit biogenesis GTPase RsgA insig. 32 77
  Pseudomonas sp. DMC3 GFF3206 Small ribosomal subunit biogenesis GTPase RsgA no data 35 66
  Klebsiella michiganensis M5al BWI76_RS02475 ribosome small subunit-dependent GTPase no data 30 64
  Pseudomonas sp. SVBP6 COO64_RS17855 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 34 66
  Castellaniella sp019104865 MT123 ABCV34_RS07005 ribosome small subunit-dependent GTPase A no data 34 72
o Paraburkholderia sabiae LMG 24235 QEN71_RS04245 ribosome small subunit-dependent GTPase A no data 34 82
  Pseudomonas fluorescens FW300-N2C3 AO356_08700 GTPase RsgA no data 34 66
  Pseudomonas fluorescens SBW25 PFLU_RS02525 small ribosomal subunit biogenesis GTPase RsgA strong 35 66
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02525 small ribosomal subunit biogenesis GTPase RsgA no data 35 66
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00727 Small ribosomal subunit biogenesis GTPase RsgA no data 35 66
  Pseudomonas orientalis W4I3 QF045_RS05505 small ribosomal subunit biogenesis GTPase RsgA strong 35 66
  Pseudomonas simiae WCS417 PS417_02445 GTPase RsgA no data 35 66
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3623 Ribosome small subunit-stimulated GTPase EngC no data 34 66
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11130 small ribosomal subunit biogenesis GTPase RsgA no data 32 60
  Pseudomonas sp. RS175 PFR28_05112 Small ribosomal subunit biogenesis GTPase RsgA no data 34 66
  Burkholderia phytofirmans PsJN BPHYT_RS14730 GTPase RsgA no data 35 67
  Dickeya dadantii 3937 DDA3937_RS18945 small ribosomal subunit biogenesis GTPase RsgA no data 33 60
  Dickeya dianthicola ME23 DZA65_RS20155 small ribosomal subunit biogenesis GTPase RsgA no data 32 60
  Pseudomonas syringae pv. syringae B728a Psyr_0563 Protein of unknown function DUF258 no data 34 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0563 Protein of unknown function DUF258 no data 34 66
  Dickeya dianthicola 67-19 HGI48_RS19040 small ribosomal subunit biogenesis GTPase RsgA no data 32 60
  Acinetobacter baumannii LAC-4 RR41_RS16400 ribosome small subunit-dependent GTPase A no data 31 68
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1990 Ribosome small subunit-stimulated GTPase EngC no data 31 60
  Bacteroides stercoris CC31F HMPREF1181_RS09445 ribosome small subunit-dependent GTPase A no data 28 76
  Pantoea sp. MT58 IAI47_02535 small ribosomal subunit biogenesis GTPase RsgA no data 31 60
o Cupriavidus basilensis FW507-4G11 RR42_RS14780 GTPase RsgA no data 30 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04299 ribosome biogenesis GTPase no data 32 71
o Paraburkholderia graminis OAS925 ABIE53_003121 ribosome biogenesis GTPase no data 32 82
  Acinetobacter radioresistens SK82 MPMX26_02631 Small ribosomal subunit biogenesis GTPase RsgA strong 32 68
  Rahnella sp. WP5 EX31_RS08870 small ribosomal subunit biogenesis GTPase RsgA no data 30 61
  Pseudomonas segetis P6 ACVTMO_RS20645 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 35 70
o Fusobacterium nucleatum SB010 HUW76_06405 ribosome small subunit-dependent GTPase A strong 24 81
  Variovorax sp. SCN45 GFF3957 Ribosome small subunit biogenesis RbfA-release protein RsgA cofit 32 73
  Pseudomonas aeruginosa MRSN321 DY961_RS10550 rsgA;go_function=GTPase small ribosomal subunit biogenesis GTPase RsgA no data 35 66
  Pseudomonas aeruginosa PA14 IKLFDK_28780 small ribosomal subunit biogenesis GTPase RsgA no data 35 66
  Pseudomonas aeruginosa PUPa3 DQ20_RS51505 rsgA;go_function=GTPase small ribosomal subunit biogenesis GTPase RsgA no data 35 66
  Variovorax sp. OAS795 ABID97_RS08775 ribosome small subunit-dependent GTPase A strong 32 72
  Acidovorax sp. GW101-3H11 Ac3H11_1680 Ribosome small subunit-stimulated GTPase EngC no data 32 67
  Erwinia tracheiphila SCR3 LU632_RS01945 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 31 66
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_06975 rsgA small ribosomal subunit biogenesis GTPase RsgA no data 31 66
  Pseudomonas stutzeri RCH2 Psest_0498 ribosome small subunit-dependent GTPase A strong 34 70
  Synechococcus elongatus PCC 7942 Synpcc7942_2076 rsgA ribosome-associated GTPase strong 31 78
  Enterobacter asburiae PDN3 EX28DRAFT_3359 ribosome small subunit-dependent GTPase A no data 30 61