Homologs of HSERO_RS18995 from Herbaspirillum seropedicae SmR1

hypothetical protein
SEED: Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS18995 hypothetical protein strong 100 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS26595 YggS family pyridoxal phosphate-dependent enzyme sig. 66 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04680 hypothetical protein sig. 63 100
o Pseudomonas simiae WCS417 PS417_26725 hypothetical protein sig. 65 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1011 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC sig. 65 100
o Pseudomonas putida KT2440 PP_5094 putative enzyme with PLP binding domain strong 66 100
o Paraburkholderia graminis OAS925 ABIE53_000841 pyridoxal phosphate enzyme (YggS family) strong 63 100
o Burkholderia phytofirmans PsJN BPHYT_RS03495 hypothetical protein strong 64 100
o Dickeya dianthicola ME23 DZA65_RS18435 YggS family pyridoxal phosphate-dependent enzyme insig. 59 99
o Cupriavidus basilensis FW507-4G11 RR42_RS17355 hypothetical protein strong 65 100
o Pseudomonas syringae pv. syringae B728a Psyr_0477 Protein of unknown function UPF0001 sig. 64 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0477 Protein of unknown function UPF0001 insig. 64 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS01225 YggS family pyridoxal phosphate-dependent enzyme strong 62 100
o Dickeya dianthicola 67-19 HGI48_RS17345 YggS family pyridoxal phosphate-dependent enzyme insig. 58 99
o Pseudomonas fluorescens FW300-N2C3 AO356_13425 hypothetical protein strong 65 100
o Dickeya dadantii 3937 DDA3937_RS17300 YggS family pyridoxal phosphate-dependent enzyme sig. 59 100
o Pseudomonas sp. S08-1 OH686_10975 Pyridoxal phosphate-containing protein YggS cofit 64 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2342 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC no data 66 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2722 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC sig. 59 99
o Dechlorosoma suillum PS Dsui_0603 pyridoxal phosphate enzyme, YggS family strong 63 100
o Pseudomonas sp. RS175 PFR28_04242 Pyridoxal phosphate homeostasis protein strong 66 100
o Pseudomonas fluorescens SBW25 PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme cofit 65 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme strong 65 100
o Variovorax sp. SCN45 GFF3744 Pyridoxal phosphate-containing protein YggS no data 59 99
o Pectobacterium carotovorum WPP14 HER17_RS03810 YggS family pyridoxal phosphate-dependent enzyme cofit 59 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4601 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC strong 66 100
o Variovorax sp. OAS795 ABID97_RS00250 YggS family pyridoxal phosphate-dependent enzyme no data 59 99
o Pseudomonas stutzeri RCH2 Psest_0284 pyridoxal phosphate enzyme, YggS family strong 62 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_02455 YggS family pyridoxal phosphate enzyme cofit 55 100
o Pseudomonas fluorescens FW300-N2E3 AO353_08160 hypothetical protein sig. 64 100
o Klebsiella michiganensis M5al BWI76_RS24100 YggS family pyridoxal phosphate enzyme strong 57 100
o Enterobacter asburiae PDN3 EX28DRAFT_2989 pyridoxal phosphate enzyme, YggS family cofit 55 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3054 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC strong 57 100
o Shewanella loihica PV-4 Shew_1137 alanine racemase domain-containing protein (RefSeq) insig. 55 100
o Ralstonia solanacearum PSI07 RPSI07_RS11725 YggS family pyridoxal phosphate-dependent enzyme strong 61 100
o Escherichia fergusonii Becca EFB2_00951 Pyridoxal phosphate homeostasis protein insig. 54 100
o Ralstonia solanacearum GMI1000 RS_RS13435 YggS family pyridoxal phosphate-dependent enzyme strong 60 100
o Escherichia coli BL21 ECD_02781 UPF0001 family protein, PLP-binding insig. 54 100
o Escherichia coli ECOR27 NOLOHH_11125 yggS pyridoxal phosphate homeostasis protein strong 54 100
o Escherichia coli ECOR38 HEPCGN_18560 yggS pyridoxal phosphate homeostasis protein strong 54 100
o Escherichia coli ECRC101 OKFHMN_19255 yggS pyridoxal phosphate homeostasis protein strong 54 100
o Escherichia coli ECRC101 MCAODC_09775 yggS pyridoxal phosphate homeostasis protein strong 54 100
o Escherichia coli ECRC102 NIAGMN_17020 yggS pyridoxal phosphate homeostasis protein strong 54 100
o Escherichia coli ECRC62 BNILDI_09705 yggS pyridoxal phosphate homeostasis protein insig. 54 100
o Escherichia coli ECRC98 JDDGAC_22885 yggS pyridoxal phosphate homeostasis protein no data 54 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00765 Pyridoxal phosphate homeostasis protein sig. 54 100
o Escherichia coli Nissle 1917 ECOLIN_RS16415 pyridoxal phosphate homeostasis protein insig. 54 100
o Escherichia coli BW25113 b2951 yggS predicted enzyme (NCBI) strong 54 100
o Escherichia coli ECRC99 KEDOAH_08885 yggS pyridoxal phosphate homeostasis protein no data 54 100
o Shewanella sp. ANA-3 Shewana3_1194 hypothetical protein (RefSeq) cofit 52 100
o Shewanella oneidensis MR-1 SO3352 conserved hypothetical protein TIGR00044 (NCBI ptt file) strong 51 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05575 YggS family pyridoxal phosphate-dependent enzyme strong 61 100
o Ralstonia solanacearum UW163 UW163_RS08050 YggS family pyridoxal phosphate-dependent enzyme insig. 61 100
o Rahnella sp. WP5 EX31_RS02685 YggS family pyridoxal phosphate-dependent enzyme insig. 55 100
o Acidovorax sp. GW101-3H11 Ac3H11_4474 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC strong 58 93
o Pantoea sp. MT58 IAI47_03595 YggS family pyridoxal phosphate-dependent enzyme strong 56 100
o Serratia liquefaciens MT49 IAI46_21410 YggS family pyridoxal phosphate-dependent enzyme insig. 56 100
o Enterobacter sp. TBS_079 MPMX20_03809 Pyridoxal phosphate homeostasis protein sig. 55 100
o Erwinia tracheiphila SCR3 LU632_RS05460 YggS family pyridoxal phosphate-dependent enzyme cofit 54 100
o Acinetobacter radioresistens SK82 MPMX26_02404 Pyridoxal phosphate homeostasis protein strong 54 94
o Alteromonas macleodii MIT1002 MIT1002_03061 pyridoxal phosphate enzyme, YggS family insig. 50 99
o Marinobacter adhaerens HP15 HP15_288 alanine racemase domain protein insig. 59 87
o Shewanella amazonensis SB2B Sama_2477 hypothetical protein (RefSeq) strong 52 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0196 pyridoxal phosphate enzyme, YggS family insig. 46 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1711.1 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC strong 51 87
o Lysobacter sp. OAE881 ABIE51_RS16060 YggS family pyridoxal phosphate-dependent enzyme insig. 53 86
o Desulfovibrio vulgaris Miyazaki F DvMF_2208 alanine racemase domain protein (RefSeq) sig. 43 94
  Pectobacterium carotovorum WPP14 HER17_RS01985 YggS family pyridoxal phosphate-dependent enzyme insig. 42 96
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02905 YggS family pyridoxal phosphate-dependent enzyme insig. 41 100
o Agrobacterium fabrum C58 Atu2747 hypothetical protein strong 45 99
  Rhodopseudomonas palustris CGA009 TX73_014475 YggS family pyridoxal phosphate-dependent enzyme insig. 42 96
  Rhodanobacter denitrificans MT42 LRK55_RS02655 YggS family pyridoxal phosphate-dependent enzyme cofit 41 99
o Synechococcus elongatus PCC 7942 Synpcc7942_2060 ylmE hypothetical protein strong 47 87
o Magnetospirillum magneticum AMB-1 AMB_RS00120 YggS family pyridoxal phosphate-dependent enzyme cofit 45 99
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09305 YggS family pyridoxal phosphate-dependent enzyme no data 41 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU0051 conserved hypothetical protein TIGR00044 (TIGR) sig. 43 98
o Bosea sp. OAE506 ABIE41_RS04720 YggS family pyridoxal phosphate-dependent enzyme cofit 43 99
  Rhodanobacter sp. FW510-T8 OKGIIK_09885 Pyridoxal phosphate homeostasis protein insig. 41 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06285 YggS family pyridoxal phosphate enzyme strong 36 98
o Rhizobium sp. OAE497 ABIE40_RS19180 YggS family pyridoxal phosphate-dependent enzyme no data 42 97
  Herbaspirillum seropedicae SmR1 HSERO_RS02515 enzyme with a TIM-barrel fold protein insig. 43 97
  Rhodospirillum rubrum S1H Rru_A1141 Protein of unknown function UPF0001 (NCBI) insig. 39 99
o Azospirillum brasilense Sp245 AZOBR_RS01870 alanine racemase no data 42 99
  Pseudomonas fluorescens FW300-N2E3 AO353_10505 hypothetical protein sig. 40 99
  Ralstonia solanacearum PSI07 RPSI07_RS02580 YggS family pyridoxal phosphate-dependent enzyme insig. 39 98
  Castellaniella sp019104865 MT123 ABCV34_RS02955 YggS family pyridoxal phosphate-dependent enzyme strong 39 98
  Rhodospirillum rubrum S1H Rru_A3634 Protein of unknown function UPF0001 (NCBI) insig. 42 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2160 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC insig. 41 97
  Rhodanobacter denitrificans MT42 LRK55_RS08955 YggS family pyridoxal phosphate-dependent enzyme insig. 40 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06410 YggS family pyridoxal phosphate enzyme sig. 35 99
o Sinorhizobium meliloti 1021 SMc02812 hypothetical protein sig. 40 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20285 YggS family pyridoxal phosphate-dependent enzyme sig. 40 96
  Ralstonia solanacearum UW163 UW163_RS18890 YggS family pyridoxal phosphate-dependent enzyme insig. 40 96
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS15965 YggS family pyridoxal phosphate-dependent enzyme insig. 37 91
o Bacteroides thetaiotaomicron VPI-5482 BT1332 conserved hypothetical protein (NCBI ptt file) insig. 34 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11740 YggS family pyridoxal phosphate-dependent enzyme insig. 33 98
o Azospirillum sp. SherDot2 MPMX19_00050 Pyridoxal phosphate homeostasis protein cofit 42 99
o Dinoroseobacter shibae DFL-12 Dshi_0042 alanine racemase domain protein (RefSeq) strong 42 96
  Ralstonia solanacearum GMI1000 RS_RS20395 YggS family pyridoxal phosphate-dependent enzyme insig. 39 98
o Bacteroides stercoris CC31F HMPREF1181_RS10865 YggS family pyridoxal phosphate-dependent enzyme insig. 34 99