Homologs of HSERO_RS07015 from Herbaspirillum seropedicae SmR1

isocitrate dehydrogenase
SEED: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
KEGG: isocitrate dehydrogenase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS07015 isocitrate dehydrogenase sig. 100 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS00460 NADP-dependent isocitrate dehydrogenase no data 81 100
o Ralstonia solanacearum PSI07 RPSI07_RS12425 NADP-dependent isocitrate dehydrogenase no data 81 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS02980 NADP-dependent isocitrate dehydrogenase insig. 80 100
o Ralstonia solanacearum GMI1000 RS_RS12485 NADP-dependent isocitrate dehydrogenase no data 81 100
o Acidovorax sp. GW101-3H11 Ac3H11_2377 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) cofit 79 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04855 isocitrate dehydrogenase (NADP(+)) no data 81 100
o Ralstonia solanacearum UW163 UW163_RS08770 isocitrate dehydrogenase (NADP(+)) no data 81 100
o Cupriavidus basilensis FW507-4G11 RR42_RS17135 isocitrate dehydrogenase insig. 81 100
o Variovorax sp. OAS795 ABID97_RS16920 NADP-dependent isocitrate dehydrogenase strong 77 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04085 isocitrate dehydrogenase (NADP) insig. 80 100
o Paraburkholderia graminis OAS925 ABIE53_003317 isocitrate dehydrogenase cofit 79 100
o Burkholderia phytofirmans PsJN BPHYT_RS15730 isocitrate dehydrogenase sig. 79 100
o Castellaniella sp019104865 MT123 ABCV34_RS07265 NADP-dependent isocitrate dehydrogenase no data 79 100
o Variovorax sp. SCN45 GFF343 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) cofit 77 100
o Pseudomonas stutzeri RCH2 Psest_2024 isocitrate dehydrogenase, NADP-dependent, prokaryotic type insig. 72 100
o Pseudomonas putida KT2440 PP_4011 isocitrate dehydrogenase, NADP(+)-specific sig. 72 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2643 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) insig. 71 100
o Pseudomonas sp. S08-1 OH686_00220 isocitrate dehydrogenase, NADP-dependent no data 71 100
o Pseudomonas fluorescens FW300-N2C3 AO356_22135 isocitrate dehydrogenase sig. 71 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4515 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) cofit 70 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_289 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) strong 71 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4052 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) sig. 71 100
o Pseudomonas fluorescens FW300-N2E3 AO353_27690 isocitrate dehydrogenase sig. 71 100
o Pseudomonas sp. RS175 PFR28_02616 Isocitrate dehydrogenase [NADP] strong 70 100
o Pseudomonas fluorescens SBW25 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase insig. 71 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18565 NADP-dependent isocitrate dehydrogenase insig. 71 100
o Pseudomonas simiae WCS417 PS417_16525 isocitrate dehydrogenase sig. 71 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02532 Isocitrate dehydrogenase [NADP] no data 72 99
o Serratia liquefaciens MT49 IAI46_10460 NADP-dependent isocitrate dehydrogenase no data 70 99
o Escherichia coli BL21 ECD_01134 isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase no data 71 99
o Escherichia fergusonii Becca EFB2_02839 Isocitrate dehydrogenase [NADP] no data 71 99
o Escherichia coli ECOR27 NOLOHH_20885 icd NADP-dependent isocitrate dehydrogenase no data 71 99
o Escherichia coli ECOR38 HEPCGN_24245 icd NADP-dependent isocitrate dehydrogenase no data 71 99
o Escherichia coli ECRC62 BNILDI_19050 icd NADP-dependent isocitrate dehydrogenase no data 71 99
o Escherichia coli Nissle 1917 ECOLIN_RS06640 NADP-dependent isocitrate dehydrogenase no data 71 99
o Escherichia coli BW25113 b1136 icd isocitrate dehydrogenase (NCBI) no data 71 99
o Escherichia coli ECRC101 OKFHMN_00760 icd NADP-dependent isocitrate dehydrogenase no data 71 99
o Escherichia coli ECRC101 MCAODC_22325 icd NADP-dependent isocitrate dehydrogenase no data 71 99
o Escherichia coli ECRC102 NIAGMN_24905 icd NADP-dependent isocitrate dehydrogenase no data 71 99
o Escherichia coli ECRC98 JDDGAC_06605 icd NADP-dependent isocitrate dehydrogenase no data 71 99
o Escherichia coli ECRC99 KEDOAH_24845 icd NADP-dependent isocitrate dehydrogenase no data 71 99
o Pantoea sp. MT58 IAI47_11900 NADP-dependent isocitrate dehydrogenase no data 70 99
o Dickeya dadantii 3937 DDA3937_RS11470 NADP-dependent isocitrate dehydrogenase no data 71 98
o Acinetobacter radioresistens SK82 MPMX26_01012 Isocitrate dehydrogenase [NADP] cofit 70 100
o Klebsiella michiganensis M5al BWI76_RS11330 isocitrate dehydrogenase (NADP(+)) no data 71 99
o Enterobacter sp. TBS_079 MPMX20_01820 Isocitrate dehydrogenase [NADP] no data 71 99
o Dickeya dianthicola 67-19 HGI48_RS11515 NADP-dependent isocitrate dehydrogenase no data 70 99
o Dickeya dianthicola ME23 DZA65_RS11850 NADP-dependent isocitrate dehydrogenase no data 70 99
o Rahnella sp. WP5 EX31_RS24590 NADP-dependent isocitrate dehydrogenase no data 70 99
o Enterobacter asburiae PDN3 EX28DRAFT_1794 isocitrate dehydrogenase (NADP) (EC 1.1.1.42) no data 71 99
o Erwinia tracheiphila SCR3 LU632_RS14560 icd NADP-dependent isocitrate dehydrogenase no data 71 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3422 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) no data 71 99
o Pectobacterium carotovorum WPP14 HER17_RS11610 NADP-dependent isocitrate dehydrogenase no data 69 99
o Dechlorosoma suillum PS Dsui_3296 isocitrate dehydrogenase, NADP-dependent, prokaryotic type cofit 71 99
o Bacteroides thetaiotaomicron VPI-5482 BT2071 isocitrate dehydrogenase [NADP] (NCBI ptt file) strong 62 97
o Bacteroides ovatus ATCC 8483 BACOVA_03311 dehydrogenase, isocitrate/isopropylmalate family insig. 61 97
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14330 NADP-dependent isocitrate dehydrogenase strong 62 93
o Phocaeicola dorei CL03T12C01 ABI39_RS09960 NADP-dependent isocitrate dehydrogenase strong 62 93
o Bacteroides stercoris CC31F HMPREF1181_RS08300 NADP-dependent isocitrate dehydrogenase insig. 62 91
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS07510 NADP-dependent isocitrate dehydrogenase insig. 56 96
o Synechococcus elongatus PCC 7942 Synpcc7942_1719 icd isocitrate dehydrogenase no data 49 100
o Desulfovibrio vulgaris Hildenborough JW710 DVU0477 icd isocitrate dehydrogenase, NADP-dependent (TIGR) no data 55 92
o Desulfovibrio vulgaris Miyazaki F DvMF_1739 isocitrate/isopropylmalate dehydrogenase (RefSeq) no data 53 91
  Alteromonas macleodii MIT1002 MIT1002_00983 Isocitrate dehydrogenase [NADP] cofit 35 87
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17775 isocitrate dehydrogenase no data 33 86
  Lysobacter sp. OAE881 ABIE51_RS14200 isocitrate dehydrogenase no data 34 86
  Shewanella sp. ANA-3 Shewana3_2890 isocitrate dehydrogenase (RefSeq) no data 33 87
  Shewanella amazonensis SB2B Sama_2423 isocitrate dehydrogenase (RefSeq) no data 34 82
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) no data 35 86
  Shewanella oneidensis MR-1 SO1538 isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) no data 34 87
  Cupriavidus basilensis FW507-4G11 RR42_RS29535 isocitrate dehydrogenase insig. 33 86
  Shewanella loihica PV-4 Shew_2760 isocitrate dehydrogenase (RefSeq) no data 32 93
  Cupriavidus basilensis FW507-4G11 RR42_RS22955 isocitrate dehydrogenase insig. 32 86
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00740 isocitrate dehydrogenase no data 31 86
  Rhodanobacter sp. FW510-T8 OKGIIK_03810 leuB isocitrate dehydrogenase no data 33 86
  Rhodanobacter denitrificans MT42 LRK55_RS14765 isocitrate dehydrogenase no data 33 86
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15050 isocitrate dehydrogenase no data 33 86
  Azospirillum sp. SherDot2 MPMX19_00922 Isocitrate dehydrogenase [NADP] no data 33 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4068 isocitrate dehydrogenase sig. 31 92
  Methanococcus maripaludis JJ MMJJ_RS00560 homoisocitrate dehydrogenase strong 29 88
  Methanococcus maripaludis S2 MMP_RS04575 homoisocitrate dehydrogenase no data 29 88
  Variovorax sp. OAS795 ABID97_RS07480 isocitrate/isopropylmalate family dehydrogenase strong 32 86
  Variovorax sp. SCN45 GFF2590 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) insig. 32 87
  Azospirillum brasilense Sp245 AZOBR_RS11025 isocitrate dehydrogenase strong 33 92
  Methanococcus maripaludis JJ MMJJ_RS02220 3-isopropylmalate dehydrogenase no data 30 88
  Methanococcus maripaludis S2 MMP_RS02855 3-isopropylmalate dehydrogenase no data 30 88
  Bifidobacterium breve UCC2003 BBR_RS12870 3-isopropylmalate dehydrogenase strong 32 85
  Pantoea sp. MT58 IAI47_17525 tartrate dehydrogenase sig. 29 87
  Phaeobacter inhibens DSM 17395 PGA1_c17990 D-malate dehydrogenase insig. 30 86
  Pseudomonas sp. RS175 PFR28_02018 Homoisocitrate dehydrogenase insig. 29 86
  Herbaspirillum seropedicae SmR1 HSERO_RS07390 tartrate dehydrogenase strong 29 87
  Cupriavidus basilensis FW507-4G11 RR42_RS33755 tartrate dehydrogenase insig. 28 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4412 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) insig. 28 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18940 tartrate dehydrogenase no data 27 87
  Ralstonia solanacearum UW163 UW163_RS20190 tartrate dehydrogenase insig. 27 87
  Variovorax sp. OAS795 ABID97_RS25885 tartrate dehydrogenase insig. 28 87
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2176 3-isopropylmalate dehydrogenase (EC 1.1.1.85) insig. 30 80
  Rhodopseudomonas palustris CGA009 TX73_008960 tartrate dehydrogenase insig. 28 91
  Escherichia coli BL21 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase cofit 27 87