Homologs of HMPREF1078_RS13920 from Parabacteroides merdae CL09T00C40

tRNA 2-thiocytidine biosynthesis TtcA family protein
SEED: tRNA(Cytosine32)-2-thiocytidine synthetase

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13920 tRNA 2-thiocytidine biosynthesis TtcA family protein insig. 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_05345 PP-loop family protein insig. 67 99
o Bacteroides stercoris CC31F HMPREF1181_RS13335 adenine nucleotide alpha hydrolase family protein insig. 68 98
o Bacteroides thetaiotaomicron VPI-5482 BT4558 conserved hypothetical protein (NCBI ptt file) insig. 66 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05785 adenine nucleotide alpha hydrolase family protein insig. 64 99
o Phocaeicola dorei CL03T12C01 ABI39_RS18325 adenine nucleotide alpha hydrolase family protein sig. 64 99
o Fusobacterium nucleatum SB010 HUW76_05920 tRNA 2-thiocytidine(32) synthetase TtcA strong 37 89
  Vibrio cholerae E7946 ATCC 55056 CSW01_07180 tRNA 2-thiocytidine(32) synthetase TtcA insig. 33 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05824 tRNA s(2)C-32 sulfurtransferase insig. 32 98
  Acinetobacter radioresistens SK82 MPMX26_00810 tRNA-cytidine(32) 2-sulfurtransferase insig. 30 93
o Herbaspirillum seropedicae SmR1 HSERO_RS22035 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 33 94
  Rahnella sp. WP5 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA insig. 33 93
  Burkholderia phytofirmans PsJN BPHYT_RS18570 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 32 98
  Marinobacter adhaerens HP15 HP15_2116 PP-loop domain protein insig. 31 93
  Paraburkholderia graminis OAS925 ABIE53_000036 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 31 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1658 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 34 95
  Shewanella sp. ANA-3 Shewana3_2117 PP-loop domain-containing protein (RefSeq) sig. 31 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS28595 tRNA 2-thiocytidine(32) synthetase TtcA cofit 30 98
  Shewanella oneidensis MR-1 SO2354 conserved hypothetical protein (NCBI ptt file) insig. 32 91
o Erwinia tracheiphila SCR3 LU632_RS12165 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 32 94
  Acidovorax sp. GW101-3H11 Ac3H11_3296 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 37 73
o Pseudomonas fluorescens FW300-N2E3 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 29 91
  Acidovorax sp. GW101-3H11 Ac3H11_1817 tRNA(Cytosine32)-2-thiocytidine synthetase cofit 31 95
o Pseudomonas fluorescens FW300-N2C3 AO356_19000 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 29 95
  Shewanella amazonensis SB2B Sama_1801 hypothetical protein (RefSeq) sig. 31 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 29 95
o Rhodanobacter sp. FW510-T8 OKGIIK_13200 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 33 95
  Pantoea sp. MT58 IAI47_09475 tRNA 2-thiocytidine(32) synthetase TtcA insig. 31 94
o Pseudomonas sp. RS175 PFR28_03236 tRNA-cytidine(32) 2-sulfurtransferase insig. 29 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16485 tRNA 2-thiocytidine(32) synthetase TtcA insig. 36 74
  Alteromonas macleodii MIT1002 MIT1002_02139 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 31 93
  Kangiella aquimarina DSM 16071 B158DRAFT_2154 tRNA s(2)C-32 sulfurtransferase (EC 2.8.1.4) insig. 30 93
o Rhodanobacter denitrificans MT42 LRK55_RS10320 tRNA 2-thiocytidine(32) synthetase TtcA insig. 31 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10680 tRNA 2-thiocytidine(32) synthetase TtcA insig. 31 95
  Serratia liquefaciens MT49 IAI46_13420 tRNA 2-thiocytidine(32) synthetase TtcA insig. 31 93
  Pectobacterium carotovorum WPP14 HER17_RS09605 tRNA 2-thiocytidine(32) synthetase TtcA insig. 31 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5711 tRNA(Cytosine32)-2-thiocytidine synthetase strong 29 95
o Pseudomonas fluorescens SBW25 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA sig. 30 95
o Enterobacter asburiae PDN3 EX28DRAFT_1007 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control insig. 30 96
o Enterobacter sp. TBS_079 MPMX20_02440 tRNA-cytidine(32) 2-sulfurtransferase insig. 30 96
o Pseudomonas simiae WCS417 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 29 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 29 95
  Dickeya dianthicola 67-19 HGI48_RS12410 tRNA 2-thiocytidine(32) synthetase TtcA insig. 31 93
o Lysobacter sp. OAE881 ABIE51_RS01305 tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS05700 tRNA 2-thiocytidine(32) synthetase TtcA insig. 31 92
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5211.1 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 33 77
  Dickeya dadantii 3937 DDA3937_RS12330 tRNA 2-thiocytidine(32) synthetase TtcA insig. 31 93
  Dickeya dianthicola ME23 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA insig. 31 93
o Pseudomonas putida KT2440 PP_1641 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 29 93
  Sinorhizobium meliloti 1021 SMc00534 C32 tRNA thiolase insig. 28 96
  Klebsiella michiganensis M5al BWI76_RS12710 tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 94
o Pseudomonas syringae pv. syringae B728a Psyr_3705 conserved hypothetical protein insig. 29 89
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3705 conserved hypothetical protein insig. 29 89
  Shewanella loihica PV-4 Shew_1995 PP-loop domain-containing protein (RefSeq) insig. 30 94
o Pseudomonas sp. S08-1 OH686_05145 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA cofit 29 91
  Escherichia fergusonii Becca EFB2_02583 tRNA-cytidine(32) 2-sulfurtransferase insig. 30 93
o Variovorax sp. OAS795 ABID97_RS06505 tRNA 2-thiocytidine(32) synthetase TtcA insig. 29 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10245 tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 92
  Ralstonia solanacearum UW163 UW163_RS03335 tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 92
  Castellaniella sp019104865 MT123 ABCV34_RS10450 tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 96
  Cupriavidus basilensis FW507-4G11 RR42_RS01445 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 30 97
o Pseudomonas stutzeri RCH2 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control insig. 30 87
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase strong 30 93
  Escherichia coli Nissle 1917 ECOLIN_RS08065 tRNA 2-thiocytidine(32) synthetase TtcA no data 30 93
  Escherichia coli BL21 ECD_01321 tRNA s(2)C32 thioltransferase, iron sulfur cluster protein insig. 30 93
  Escherichia coli ECOR27 NOLOHH_19870 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 93
  Escherichia coli ECRC100 OKFHMN_02155 ttcA tRNA 2-thiocytidine(32) synthetase TtcA no data 30 93
  Escherichia coli ECRC101 MCAODC_16100 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 93
  Escherichia coli ECRC102 NIAGMN_26325 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 93
  Escherichia coli ECRC98 JDDGAC_04715 ttcA tRNA 2-thiocytidine(32) synthetase TtcA cofit 30 93
  Escherichia coli ECRC99 KEDOAH_26600 ttcA tRNA 2-thiocytidine(32) synthetase TtcA no data 30 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02337 tRNA-cytidine(32) 2-sulfurtransferase insig. 30 93
  Escherichia coli BW25113 b1344 ydaO predicted C32 tRNA thiolase (NCBI) sig. 30 93
  Ralstonia solanacearum GMI1000 RS_RS00865 tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 92
  Ralstonia solanacearum PSI07 RPSI07_RS23130 tRNA 2-thiocytidine(32) synthetase TtcA insig. 30 92
  Escherichia coli ECOR38 HEPCGN_26005 ttcA tRNA 2-thiocytidine(32) synthetase TtcA cofit 30 93
  Escherichia coli ECRC62 BNILDI_18020 ttcA tRNA 2-thiocytidine(32) synthetase TtcA cofit 30 93
  Variovorax sp. SCN45 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA insig. 29 95
o Dinoroseobacter shibae DFL-12 Dshi_0330 PP-loop domain protein (RefSeq) insig. 29 95
o Phaeobacter inhibens DSM 17395 PGA1_c02110 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 29 98
  Dechlorosoma suillum PS Dsui_0695 putative ATPase of the PP-loop superfamily implicated in cell cycle control insig. 30 89
o Desulfovibrio vulgaris Hildenborough JW710 DVU3241 conserved hypothetical protein (TIGR) insig. 27 90
  Agrobacterium fabrum C58 Atu1858 hypothetical protein insig. 28 95
o Rhizobium sp. OAE497 ABIE40_RS10230 tRNA 2-thiocytidine(32) synthetase TtcA insig. 27 96
o Desulfovibrio vulgaris Miyazaki F DvMF_2293 PP-loop domain protein (RefSeq) insig. 27 90
  Methanococcus maripaludis JJ MMJJ_RS07360 TIGR00269 family protein insig. 27 90
  Methanococcus maripaludis S2 MMP_RS06995 TIGR00269 family protein no data 27 90
  Methanococcus maripaludis S2 MMP_RS06980 tRNA 2-thiocytidine biosynthesis TtcA family protein strong 27 94
  Methanococcus maripaludis JJ MMJJ_RS07375 tRNA 2-thiocytidine biosynthesis TtcA family protein strong 27 94
  Fusobacterium nucleatum SB010 HUW76_10110 tRNA lysidine(34) synthetase TilS no data 27 88
  Desulfovibrio vulgaris Miyazaki F DvMF_2330 PP-loop domain protein (RefSeq) insig. 26 87
  Desulfovibrio vulgaris Hildenborough JW710 DVU0135 conserved hypothetical protein (TIGR) sig. 27 87
  Bacteroides thetaiotaomicron VPI-5482 BT1593 putative cell-cycle protein (NCBI ptt file) no data 23 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00330 tRNA lysidine(34) synthetase TilS no data 24 84
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13270 tRNA lysidine(34) synthetase TilS no data 24 89
  Bacteroides ovatus ATCC 8483 BACOVA_04336 tRNA(Ile)-lysidine synthetase no data 24 87
  Bacteroides stercoris CC31F HMPREF1181_RS11285 tRNA lysidine(34) synthetase TilS no data 24 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25010 tRNA lysidine(34) synthetase TilS no data 25 90
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21685 tRNA lysidine(34) synthetase TilS no data 23 84