Homologs of GFF623 from Xanthobacter sp. DMC5

Ribonuclease 3
SEED: Ribonuclease III (EC 3.1.26.3)
KEGG: ribonuclease III

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF623 Ribonuclease 3 no data 100 100
o Rhodopseudomonas palustris CGA009 TX73_013975 ribonuclease III insig. 58 88
o Bosea sp. OAE506 ABIE41_RS19930 ribonuclease III no data 57 90
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05535 ribonuclease III no data 47 89
o Sinorhizobium meliloti 1021 SMc02652 ribonuclease III no data 46 92
o Phaeobacter inhibens DSM 17395 PGA1_c01060 ribonuclease 3 sig. 44 88
o Agrobacterium fabrum C58 Atu1035 ribonuclease III no data 43 90
o Dinoroseobacter shibae DFL-12 Dshi_0200 Ribonuclease III (RefSeq) no data 47 83
o Rhizobium sp. OAE497 ABIE40_RS06075 ribonuclease III no data 42 94
o Rhodanobacter denitrificans MT42 LRK55_RS16685 ribonuclease III strong 47 84
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16970 ribonuclease III strong 47 84
o Rhodospirillum rubrum S1H Rru_A1852 Ribonuclease III (NCBI) no data 46 88
o Azospirillum sp. SherDot2 MPMX19_00843 Ribonuclease 3 no data 42 93
o Rhodanobacter sp. FW510-T8 OKGIIK_07870 rnc ribonuclease III cofit 45 85
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS11975 ribonuclease III no data 45 84
o Caulobacter crescentus NA1000 CCNA_01630 ribonuclease III no data 47 88
o Caulobacter crescentus NA1000 Δfur CCNA_01630 ribonuclease III no data 47 88
o Magnetospirillum magneticum AMB-1 AMB_RS11425 ribonuclease III cofit 42 90
o Azospirillum brasilense Sp245 AZOBR_RS22070 ribonuclease III no data 41 91
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07150 ribonuclease III no data 43 84
o Ralstonia sp. UNC404CL21Col ABZR87_RS10205 ribonuclease III no data 41 84
o Vibrio cholerae E7946 ATCC 55056 CSW01_12455 ribonuclease 3 no data 38 87
o Alteromonas macleodii MIT1002 MIT1002_02713 Ribonuclease 3 no data 39 82
  Herbaspirillum seropedicae SmR1 HSERO_RS09660 ribonuclease III strong 39 84
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14485 ribonuclease III no data 41 84
o Ralstonia solanacearum UW163 UW163_RS11950 ribonuclease III no data 41 84
o Ralstonia solanacearum PSI07 RPSI07_RS18975 ribonuclease III no data 41 85
o Methylophilus sp. DMC18 GFF2738 Ribonuclease 3 cofit 39 84
o Kangiella aquimarina DSM 16071 B158DRAFT_2187 ribonuclease III, bacterial sig. 37 84
o Ralstonia solanacearum GMI1000 RS_RS05265 ribonuclease 3 no data 41 85
o Acinetobacter baumannii LAC-4 RR41_RS04850 ribonuclease III no data 39 86
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_01190 rnc ribonuclease III no data 39 89
o Erwinia tracheiphila SCR3 LU632_RS15385 rnc ribonuclease III insig. 39 89
o Shewanella loihica PV-4 Shew_1054 ribonuclease III (RefSeq) no data 40 88
  Cupriavidus basilensis FW507-4G11 RR42_RS14040 ribonuclease III no data 41 82
o Acinetobacter radioresistens SK82 MPMX26_02156 Ribonuclease 3 no data 38 86
o Pantoea sp. MT58 IAI47_04880 ribonuclease III no data 38 89
o Sphingobium sp. HT1-2 GFF118 Ribonuclease III (EC 3.1.26.3) no data 41 80
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2475 Ribonuclease III (EC 3.1.26.3) strong 39 78
o Dechlorosoma suillum PS Dsui_2460 ribonuclease III no data 39 85
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3673.1 Ribonuclease III (EC 3.1.26.3) no data 41 85
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1946 ribonuclease III, bacterial no data 43 76
o Shewanella amazonensis SB2B Sama_0880 rnc ribonuclease III (RefSeq) no data 38 88
  Escherichia coli BL21 ECD_02461 RNase III no data 38 78
  Escherichia fergusonii Becca EFB2_01329 Ribonuclease 3 no data 38 78
  Escherichia coli ECOR27 NOLOHH_13085 rnc ribonuclease III no data 38 78
  Escherichia coli ECOR38 HEPCGN_20555 rnc ribonuclease III no data 38 78
  Escherichia coli ECRC100 OKFHMN_21410 rnc ribonuclease III no data 38 78
  Escherichia coli ECRC101 MCAODC_11940 rnc ribonuclease III no data 38 78
  Escherichia coli ECRC102 NIAGMN_19180 rnc ribonuclease III no data 38 78
  Escherichia coli ECRC62 BNILDI_11885 rnc ribonuclease III no data 38 78
  Escherichia coli ECRC98 JDDGAC_25075 rnc ribonuclease III no data 38 78
  Escherichia coli ECRC99 KEDOAH_06810 rnc ribonuclease III no data 38 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01140 Ribonuclease 3 no data 38 78
  Escherichia coli Nissle 1917 ECOLIN_RS14530 ribonuclease III no data 38 78
  Escherichia coli BW25113 b2567 rnc ribonuclease III (NCBI) strong 38 78
o Erwinia amylovora T8 OLJFJH_10255 ribonuclease III no data 37 89
o Lysobacter sp. OAE881 ABIE51_RS13860 ribonuclease III no data 41 81
  Enterobacter asburiae PDN3 EX28DRAFT_0079 ribonuclease III, bacterial no data 38 78
  Enterobacter sp. TBS_079 MPMX20_03438 Ribonuclease 3 no data 38 78
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14770 ribonuclease III no data 37 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS04610 ribonuclease III insig. 39 78
  Dickeya dianthicola ME23 DZA65_RS16900 ribonuclease III no data 38 78
  Klebsiella pneumoniae MKP103 KDGMDA_28445 ribonuclease III no data 38 78
  Dickeya dadantii 3937 DDA3937_RS15735 ribonuclease III no data 38 78
  Dickeya dianthicola 67-19 HGI48_RS15820 ribonuclease III no data 38 78
  Klebsiella michiganensis M5al BWI76_RS21320 ribonuclease 3 no data 38 78
o Pectobacterium carotovorum WPP14 HER17_RS05815 ribonuclease III no data 36 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04362 RNAse III (EC 3.1.26.3) insig. 40 77
o Variovorax sp. SCN45 GFF3870 Ribonuclease III (EC 3.1.26.3) strong 39 88
o Marinobacter adhaerens HP15 HP15_784 ribonuclease 3 insig. 36 89
o Variovorax sp. OAS795 ABID97_RS08365 ribonuclease III strong 40 88
  Paraburkholderia graminis OAS925 ABIE53_003036 ribonuclease-3 sig. 39 77
o Shewanella oneidensis MR-1 SO1348 rnc ribonuclease III (NCBI ptt file) no data 36 88
o Shewanella sp. ANA-3 Shewana3_3026 rnc ribonuclease III (RefSeq) no data 36 88
  Rahnella sp. WP5 EX31_RS21835 ribonuclease III no data 39 78
o Castellaniella sp019104865 MT123 ABCV34_RS08325 ribonuclease III no data 39 82
  Burkholderia phytofirmans PsJN BPHYT_RS14370 ribonuclease III insig. 39 75
o Desulfovibrio vulgaris Miyazaki F DvMF_0243 rnc ribonuclease III (RefSeq) no data 39 84
  Serratia liquefaciens MT49 IAI46_19550 ribonuclease III no data 39 78
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3346 Ribonuclease III (EC 3.1.26.3) no data 41 76
o Pseudomonas sp. BP01 JOY50_RS14695 rnc ribonuclease III no data 37 89
o Pseudomonas aeruginosa PA14 IKLFDK_03305 ribonuclease III no data 38 89
o Pseudomonas aeruginosa PUPa3 DQ20_RS44200 rnc;go_function=ribonuclease ribonuclease III no data 38 89
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01244 Ribonuclease 3 no data 39 89
o Pseudomonas fluorescens SBW25 PFLU_RS05260 ribonuclease III no data 39 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05260 ribonuclease III no data 39 89
o Desulfovibrio vulgaris Hildenborough JW710 DVU1440 rnc ribonuclease III (TIGR) no data 38 84
o Pseudomonas segetis P6 ACVTMO_RS06980 rnc ribonuclease III no data 39 89
o Pseudomonas simiae WCS417 PS417_05190 ribonuclease III no data 38 89
o Pseudomonas stutzeri RCH2 Psest_3092 ribonuclease III, bacterial strong 38 89
o Pseudomonas aeruginosa MRSN321 DY961_RS08650 rnc;go_function=ribonuclease ribonuclease III no data 38 89
o Pseudomonas putida KT2440 PP_1433 Ribonuclease 3 no data 36 89
o Pseudomonas syringae pv. syringae B728a Psyr_3951 RNAse III no data 38 89
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3951 RNAse III no data 38 89
  Acidovorax sp. GW101-3H11 Ac3H11_1566 Ribonuclease III (EC 3.1.26.3) no data 38 78
o Pseudomonas orientalis W4I3 QF045_RS08180 ribonuclease III no data 37 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5426 Ribonuclease III (EC 3.1.26.3) no data 37 89
o Pseudomonas fluorescens FW300-N2E3 AO353_04510 ribonuclease III no data 37 89
o Pseudomonas sp. SVBP6 COO64_RS16555 rnc ribonuclease III no data 36 89