Homologs of GFF5259 from Sphingobium sp. HT1-2

hypothetical protein
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF5259 hypothetical protein insig. 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3636 RNA polymerase sigma factor, sigma-70 family insig. 72 98
  Acidovorax sp. GW101-3H11 Ac3H11_1827 RNA polymerase sigma-70 factor, ECF subfamily insig. 50 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS20845 sigma-70 family RNA polymerase sigma factor insig. 50 98
o Burkholderia phytofirmans PsJN BPHYT_RS25560 RNA polymerase sigma factor insig. 47 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01090 sigma-70 family RNA polymerase sigma factor insig. 46 94
o Caulobacter crescentus NA1000 CCNA_03362 ECF-family RNA polymerase sigma factor strong 45 97
o Caulobacter crescentus NA1000 Δfur CCNA_03362 ECF-family RNA polymerase sigma factor cofit 45 97
  Burkholderia phytofirmans PsJN BPHYT_RS25505 RNA polymerase sigma factor insig. 45 97
o Herbaspirillum seropedicae SmR1 HSERO_RS16195 RNA polymerase sigma factor insig. 46 97
o Variovorax sp. OAS795 ABID97_RS16825 sigma-70 family RNA polymerase sigma factor insig. 46 98
o Pseudomonas stutzeri RCH2 Psest_0114 RNA polymerase sigma factor, sigma-70 family insig. 45 99
o Pseudomonas putida KT2440 PP_0994 putative RNA polymerase sigma factor insig. 44 95
o Variovorax sp. SCN45 GFF320 RNA polymerase ECF-type sigma factor insig. 46 94
o Dechlorosoma suillum PS Dsui_0155 RNA polymerase sigma factor, sigma-70 family strong 43 99
o Agrobacterium fabrum C58 Atu2268 ECF family sigma factor insig. 43 93
o Xanthobacter sp. DMC5 GFF1206 ECF RNA polymerase sigma factor SigF insig. 44 95
o Bosea sp. OAE506 ABIE41_RS02435 sigma-70 family RNA polymerase sigma factor insig. 44 95
o Rhodopseudomonas palustris CGA009 TX73_009325 sigma-70 family RNA polymerase sigma factor insig. 40 92
  Xanthobacter sp. DMC5 GFF2972 ECF RNA polymerase sigma factor SigF no data 42 92
o Azospirillum sp. SherDot2 MPMX19_04570 ECF RNA polymerase sigma factor SigF insig. 37 94
o Rhizobium sp. OAE497 ABIE40_RS01010 sigma-70 family RNA polymerase sigma factor insig. 41 90
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01786 RNA polymerase sigma-70 factor, ECF subfamily insig. 43 97
o Sinorhizobium meliloti 1021 SM_b20531 RNA polymerase sigma factor insig. 37 94
o Erwinia amylovora T8 OLJFJH_08545 RNA polymerase subunit sigma-70 insig. 34 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09080 sigma-70 family RNA polymerase sigma factor cofit 38 89
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13745 sigma-70 family RNA polymerase sigma factor insig. 34 88
  Rhodanobacter sp. FW510-T8 OKGIIK_03490 hypothetical protein insig. 38 89
o Pantoea sp. MT58 IAI47_20240 sigma-70 family RNA polymerase sigma factor insig. 33 88
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS13930 RNA polymerase sigma factor insig. 39 89
  Rhodanobacter denitrificans MT42 LRK55_RS14380 sigma-70 family RNA polymerase sigma factor insig. 36 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14665 sigma-70 family RNA polymerase sigma factor insig. 36 93
  Rhizobium sp. OAE497 ABIE40_RS19610 sigma-70 family RNA polymerase sigma factor insig. 32 87
  Rhodanobacter denitrificans MT42 LRK55_RS07240 sigma-70 family RNA polymerase sigma factor insig. 34 79
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor insig. 34 79
  Sphingobium sp. HT1-2 GFF5325 RNA polymerase ECF-type sigma factor cofit 31 78
  Mycobacterium tuberculosis H37Rv Rv3414c Probable alternative RNA polymerase sigma-D factor SigD sig. 33 94
  Bacteroides ovatus ATCC 8483 BACOVA_00842 RNA polymerase sigma-70 factor insig. 26 97
  Azospirillum brasilense Sp245 AZOBR_RS00810 RNA polymerase sigma factor RpoE insig. 35 90
  Alteromonas macleodii MIT1002 MIT1002_01916 RNA polymerase sigma factor CarQ insig. 30 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 27 90
  Pseudomonas putida KT2440 PP_3006 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 73
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3601.1 RNA polymerase sigma-70 factor insig. 31 91
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3853 RNA polymerase sigma factor, sigma-70 family insig. 29 79
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 25 89
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 32 73
  Sinorhizobium meliloti 1021 SMc01506 RNA polymerase sigma factor strong 29 78
  Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 32 82
  Bacteroides ovatus ATCC 8483 BACOVA_01066 hypothetical protein insig. 30 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13620 RNA polymerase subunit sigma insig. 34 77
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12435 hypothetical protein insig. 26 99
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2952 RNA polymerase sigma factor, sigma-70 family strong 29 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11705 hypothetical protein insig. 24 94
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08045 sigma-70 family RNA polymerase sigma factor cofit 29 95
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma insig. 31 78
  Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 30 76
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 27 86
  Azospirillum brasilense Sp245 AZOBR_RS21190 RNA polymerase sigma factor RpoE insig. 31 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4300 RNA polymerase sigma factor, sigma-70 family insig. 26 78
  Cellulophaga baltica 18 M666_RS01545 sigma-70 family RNA polymerase sigma factor insig. 26 73
  Mycobacterium tuberculosis H37Rv Rv0735 Probable alternative RNA polymerase sigma factor SigL insig. 34 74
  Azospirillum sp. SherDot2 MPMX19_01371 hypothetical protein insig. 32 78
  Pseudomonas sp. BP01 JOY50_RS12975 sigma-70 family RNA polymerase sigma factor insig. 31 73
  Shewanella amazonensis SB2B Sama_2036 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 29 86
  Variovorax sp. SCN45 GFF4558 RNA polymerase ECF-type sigma factor insig. 29 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01465 RNA polymerase sigma-70 factor, ECF subfamily insig. 28 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12860 RNA polymerase sigma-70 factor cofit 30 68
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 29 88
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14775 sigma-70 family RNA polymerase sigma factor strong 28 83
  Dinoroseobacter shibae DFL-12 Dshi_0366 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 28 85
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 32 76
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 32 93
  Phocaeicola dorei CL03T12C01 ABI39_RS02030 RNA polymerase sigma-70 factor insig. 27 91
  Bacteroides ovatus ATCC 8483 BACOVA_03129 Sigma-70 region 2 insig. 24 91
  Rhizobium sp. OAE497 ABIE40_RS18210 sigma-70 family RNA polymerase sigma factor insig. 30 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2584 RNA polymerase sigma factor, sigma-70 family insig. 28 74
  Dinoroseobacter shibae DFL-12 Dshi_2428 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 26 88
  Kangiella aquimarina DSM 16071 B158DRAFT_0139 RNA polymerase sigma factor, sigma-70 family insig. 33 78
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 32 89
  Phaeobacter inhibens DSM 17395 PGA1_c27510 'RNA polymerase sigma factor (sigma-70 family; ECF11 subgroup)' insig. 31 68
  Azospirillum sp. SherDot2 MPMX19_02022 ECF RNA polymerase sigma factor RpoE insig. 30 79
  Bacteroides stercoris CC31F HMPREF1181_RS04900 RNA polymerase sigma-70 factor insig. 29 69
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11995 RNA polymerase subunit sigma insig. 26 67
  Rhodospirillum rubrum S1H Rru_A0722 Sigma-24 (FecI) (NCBI) insig. 30 91
  Sphingobium sp. HT1-2 GFF2028 hypothetical protein cofit 32 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS14060 sigma-70 family RNA polymerase sigma factor insig. 33 68
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 31 89
  Sphingobium sp. HT1-2 GFF2317 RNA polymerase ECF-type sigma factor cofit 30 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12885 RNA polymerase insig. 27 85
  Herbaspirillum seropedicae SmR1 HSERO_RS12085 RNA polymerase sigma-E factor protein insig. 26 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17775 hypothetical protein sig. 23 94
  Pseudomonas aeruginosa MRSN321 DY961_RS13375 sigma-70 family RNA polymerase sigma factor insig. 33 71
  Pseudomonas aeruginosa PA14 IKLFDK_20100 RNA polymerase subunit sigma sig. 33 71
  Pseudomonas aeruginosa PUPa3 DQ20_RS48675 sigma-70 family RNA polymerase sigma factor insig. 33 71
  Paraburkholderia graminis OAS925 ABIE53_002123 RNA polymerase sigma factor (sigma-70 family) sig. 32 81
  Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 31 79
  Bacteroides thetaiotaomicron VPI-5482 BT4461 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 27 86
  Bosea sp. OAE506 ABIE41_RS04095 sigma-70 family RNA polymerase sigma factor strong 26 75
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07135 RNA polymerase sigma factor insig. 25 89
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 35 52