Homologs of GFF4503 from Variovorax sp. SCN45

RNA polymerase sigma factor
SEED: RNA polymerase sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4503 RNA polymerase sigma factor insig. 100 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF365 RNA polymerase sigma factor insig. 61 98
o Pseudomonas syringae pv. syringae B728a Psyr_0362 Sigma-70 region 2 insig. 54 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0362 Sigma-70 region 2 insig. 54 96
o Pseudomonas simiae WCS417 PS417_12610 RNA polymerase sigma factor sig. 54 95
o Pseudomonas fluorescens SBW25 PFLU_RS13305 sigma-70 family RNA polymerase sigma factor insig. 55 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13305 sigma-70 family RNA polymerase sigma factor sig. 55 95
o Pseudomonas segetis P6 ACVTMO_RS06730 sigma-70 family RNA polymerase sigma factor insig. 55 98
o Pseudomonas orientalis W4I3 QF045_RS17270 sigma-70 family RNA polymerase sigma factor insig. 55 95
o Pseudomonas sp. BP01 JOY50_RS12975 sigma-70 family RNA polymerase sigma factor insig. 48 97
o Pseudomonas sp. DMC3 GFF1392 ECF RNA polymerase sigma factor SigK cofit 51 98
o Pseudomonas putida KT2440 PP_3006 RNA polymerase sigma-70 factor, ECF subfamily insig. 49 97
o Agrobacterium fabrum C58 Atu0474 putative RNA polymerase sigma-70 factor insig. 47 97
o Marinobacter adhaerens HP15 HP15_p187g100 RNA polymerase sigma factor insig. 41 96
o Bosea sp. OAE506 ABIE41_RS11620 sigma-70 family RNA polymerase sigma factor insig. 40 94
  Enterobacter asburiae PDN3 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family cofit 39 92
  Rahnella sp. WP5 EX31_RS18905 sigma-70 family RNA polymerase sigma factor insig. 37 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3601.1 RNA polymerase sigma-70 factor insig. 41 92
  Acidovorax sp. GW101-3H11 Ac3H11_1599 RNA polymerase sigma factor insig. 37 99
  Acidovorax sp. GW101-3H11 Ac3H11_1622 RNA polymerase sigma factor insig. 40 88
  Cupriavidus basilensis FW507-4G11 RR42_RS15915 RNA polymerase subunit sigma-24 insig. 39 89
  Rhodanobacter sp. FW510-T8 OKGIIK_05040 RNA polymerase subunit sigma insig. 34 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08045 sigma-70 family RNA polymerase sigma factor cofit 40 89
  Variovorax sp. SCN45 GFF3817 RNA polymerase sigma factor insig. 39 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01495 sigma-70 family RNA polymerase sigma factor insig. 36 92
  Pantoea sp. MT58 IAI47_19735 sigma-70 family RNA polymerase sigma factor insig. 41 89
  Variovorax sp. OAS795 ABID97_RS08165 sigma-70 family RNA polymerase sigma factor insig. 39 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor insig. 38 98
  Burkholderia phytofirmans PsJN BPHYT_RS22710 XRE family transcriptional regulator sig. 38 98
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1715 RNA polymerase sigma factor, sigma-70 family insig. 35 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01465 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 92
  Ralstonia solanacearum PSI07 RPSI07_RS13090 DNA-directed RNA polymerase sigma-70 factor insig. 41 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor insig. 39 88
  Ralstonia solanacearum UW163 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor insig. 39 88
  Marinobacter adhaerens HP15 HP15_3899 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 33 92
  Agrobacterium fabrum C58 Atu1982 sigma factor insig. 35 88
  Alteromonas macleodii MIT1002 MIT1002_03202 Sigma-K factor insig. 32 92
  Marinobacter adhaerens HP15 HP15_950 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 30 97
  Ralstonia solanacearum GMI1000 RS_RS11855 DNA-directed RNA polymerase sigma-70 factor insig. 39 88
  Pseudomonas fluorescens SBW25 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 36 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 36 97
  Pseudomonas orientalis W4I3 QF045_RS00535 sigma-70 family RNA polymerase sigma factor cofit 35 97
  Rhizobium sp. OAE497 ABIE40_RS01975 sigma-70 family RNA polymerase sigma factor insig. 34 89
  Pseudomonas fluorescens FW300-N2E3 AO353_07625 RNA polymerase subunit sigma-70 insig. 36 92
  Rhodopseudomonas palustris CGA009 TX73_008400 sigma-70 family RNA polymerase sigma factor insig. 32 96
  Burkholderia phytofirmans PsJN BPHYT_RS21845 hypothetical protein insig. 37 92
  Kangiella aquimarina DSM 16071 B158DRAFT_0930 RNA polymerase sigma factor, sigma-70 family insig. 29 93
  Cellulophaga baltica 18 M666_RS08870 RNA polymerase sigma factor insig. 26 87
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02680 RNA polymerase subunit sigma-70 insig. 32 86
  Mycobacterium tuberculosis H37Rv Rv0445c Alternative RNA polymerase sigma factor SigK insig. 27 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4608 RNA polymerase sigma factor, sigma-70 family insig. 28 88
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24900 RNA polymerase subunit sigma-70 insig. 28 89
  Castellaniella sp019104865 MT123 ABCV34_RS04710 sigma factor insig. 29 96
  Phaeobacter inhibens DSM 17395 PGA1_c27510 'RNA polymerase sigma factor (sigma-70 family; ECF11 subgroup)' insig. 30 72
  Azospirillum sp. SherDot2 MPMX19_05742 hypothetical protein insig. 31 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18855 RNA polymerase sigma factor insig. 28 88
  Cellulophaga baltica 18 M666_RS05270 sigma-70 family RNA polymerase sigma factor insig. 31 89
  Synechococcus elongatus PCC 7942 Synpcc7942_2004 sigI RNA polymerase sigma factor insig. 29 98
  Bosea sp. OAE506 ABIE41_RS10280 sigma-70 family RNA polymerase sigma factor insig. 29 96
  Azospirillum brasilense Sp245 AZOBR_RS21190 RNA polymerase sigma factor RpoE insig. 30 87
  Rhodospirillum rubrum S1H Rru_A0722 Sigma-24 (FecI) (NCBI) insig. 29 93
  Bacteroides ovatus ATCC 8483 BACOVA_01251 RNA polymerase sigma-70 factor sig. 29 89
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3485 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 28 85
  Cellulophaga baltica 18 M666_RS18525 RNA polymerase sigma factor insig. 27 81
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 31 98
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05845 sigma-70 family RNA polymerase sigma factor insig. 31 73
  Dinoroseobacter shibae DFL-12 Dshi_2428 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 30 88
  Azospirillum brasilense Sp245 AZOBR_RS00810 RNA polymerase sigma factor RpoE insig. 30 73
  Azospirillum sp. SherDot2 MPMX19_02022 ECF RNA polymerase sigma factor RpoE insig. 29 92
  Bacteroides thetaiotaomicron VPI-5482 BT0188 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 30 87
  Azospirillum sp. SherDot2 MPMX19_05229 ECF RNA polymerase sigma factor RpoE insig. 23 88
  Bacteroides stercoris CC31F HMPREF1181_RS04900 RNA polymerase sigma-70 factor insig. 29 94
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 29 98
  Synechocystis sp000284455 PCC 6803 SGL_RS14165 sigma-70 family RNA polymerase sigma factor insig. 30 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15905 RNA polymerase sigma factor cofit 29 95
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 28 94
  Shewanella loihica PV-4 Shew_2956 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 31 96
  Rhodanobacter denitrificans MT42 LRK55_RS07240 sigma-70 family RNA polymerase sigma factor insig. 28 97
  Caulobacter crescentus NA1000 CCNA_00685 RNA polymerase sigma factor sig. 27 86
  Caulobacter crescentus NA1000 Δfur CCNA_00685 RNA polymerase sigma factor cofit 27 86
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor insig. 28 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09110 RNA polymerase sigma-70 factor sig. 26 94
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 26 98
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 29 89
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12920 RNA polymerase sigma-70 factor cofit 28 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12885 RNA polymerase insig. 25 92
  Rhodanobacter denitrificans MT42 LRK55_RS05200 sigma-70 family RNA polymerase sigma factor insig. 31 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05425 sigma-70 family RNA polymerase sigma factor insig. 31 98
  Pseudomonas sp. S08-1 OH686_11525 hypothetical protein cofit 29 87
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04580 sigma-70 family RNA polymerase sigma factor insig. 32 98
  Shewanella amazonensis SB2B Sama_2036 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 25 92
  Rhodopseudomonas palustris CGA009 TX73_024905 sigma-70 family RNA polymerase sigma factor insig. 30 92
  Bacteroides ovatus ATCC 8483 BACOVA_01682 RNA polymerase sigma-70 factor insig. 29 72
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 29 90
  Variovorax sp. OAS795 ABID97_RS24815 sigma-70 family RNA polymerase sigma factor insig. 29 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13725 sigma-70 family RNA polymerase sigma factor strong 29 88
  Variovorax sp. SCN45 GFF2126 hypothetical protein no data 28 94
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma insig. 27 99
  Rhodopseudomonas palustris CGA009 TX73_009355 sigma-70 family RNA polymerase sigma factor insig. 32 86
  Rhizobium sp. OAE497 ABIE40_RS26955 sigma-70 family RNA polymerase sigma factor insig. 26 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4205 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 26 93
  Phocaeicola dorei CL03T12C01 ABI39_RS03415 RNA polymerase sigma-70 factor insig. 25 93
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 28 97
  Pseudomonas syringae pv. syringae B728a Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 27 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 27 86
  Alteromonas macleodii MIT1002 MIT1002_02682 Sigma-W factor strong 27 78
  Dinoroseobacter shibae DFL-12 Dshi_0366 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 26 94
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04025 RNA polymerase sigma factor insig. 25 91
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 32 91
  Bacteroides ovatus ATCC 8483 BACOVA_04312 Sigma-70 region 2 insig. 27 79
  Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 32 76
  Bacteroides thetaiotaomicron VPI-5482 BT4705 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 27 85
  Shewanella oneidensis MR-1 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 25 94
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 31 77
  Magnetospirillum magneticum AMB-1 AMB_RS14160 RNA polymerase sigma factor cofit 29 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1381 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 26 88
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 29 89
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 29 90
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 31 94
  Xanthobacter sp. DMC5 GFF223 hypothetical protein insig. 31 91
  Bacteroides ovatus ATCC 8483 BACOVA_05556 RNA polymerase sigma-70 factor insig. 25 85
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 27 88
  Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 27 88
  Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 27 88
  Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 27 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4578 RNA polymerase sigma factor, sigma-70 family insig. 25 88
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 30 88
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 28 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 28 87
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 28 87
  Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 27 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00075 RNA polymerase sigma factor cofit 27 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11460 hypothetical protein insig. 24 84
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 29 93
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 29 86
  Bacteroides thetaiotaomicron VPI-5482 BT2778 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 28 79
  Rhizobium sp. OAE497 ABIE40_RS18210 sigma-70 family RNA polymerase sigma factor insig. 27 89
  Bacteroides thetaiotaomicron VPI-5482 BT1572 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 26 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11705 hypothetical protein insig. 25 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03685 sigma-70 family RNA polymerase sigma factor insig. 30 87
  Pseudomonas segetis P6 ACVTMO_RS06940 rpoE RNA polymerase sigma factor RpoE strong 28 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 28 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0603 RNA polymerase sigma factor, sigma-70 family sig. 26 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19950 RNA polymerase subunit sigma-24 insig. 27 90
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07365 RNA polymerase sigma factor insig. 27 92
  Kangiella aquimarina DSM 16071 B158DRAFT_0139 RNA polymerase sigma factor, sigma-70 family insig. 25 94
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01435 RNA polymerase sigma factor insig. 29 98
  Pseudomonas sp. BP01 JOY50_RS14665 rpoE RNA polymerase sigma factor RpoE insig. 29 89
  Pseudomonas putida KT2440 PP_1427 RNA polymerase sigma E factor sig. 29 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21720 RNA polymerase subunit sigma-70 insig. 24 99
  Rhodospirillum rubrum S1H Rru_A2537 Sigma-24 (FecI) (NCBI) insig. 30 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19085 RNA polymerase subunit sigma-24 insig. 29 90
  Pseudomonas sp. SVBP6 COO64_RS16525 rpoE RNA polymerase sigma factor RpoE insig. 29 89
  Dinoroseobacter shibae DFL-12 Dshi_3423 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 27 92
  Caulobacter crescentus NA1000 CCNA_02837 RNA polymerase ECF-type sigma factor insig. 26 94
  Caulobacter crescentus NA1000 Δfur CCNA_02837 RNA polymerase ECF-type sigma factor cofit 26 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18950 sigma-70 family RNA polymerase sigma factor insig. 32 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20645 RNA polymerase subunit sigma-70 insig. 26 88
  Phocaeicola dorei CL03T12C01 ABI39_RS02030 RNA polymerase sigma-70 factor insig. 25 94
  Shewanella loihica PV-4 Shew_1476 RNA polymerase sigma factor (RefSeq) insig. 22 88
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05665 RNA polymerase sigma-70 factor insig. 24 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07720 sigma-70 family RNA polymerase sigma factor strong 36 49
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13700 hypothetical protein insig. 25 88
  Shewanella oneidensis MR-1 SO1986 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 21 93
  Rhizobium sp. OAE497 ABIE40_RS01010 sigma-70 family RNA polymerase sigma factor insig. 30 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22010 RNA polymerase sigma factor insig. 27 88
  Bacteroides ovatus ATCC 8483 BACOVA_05151 RNA polymerase sigma-70 factor insig. 26 89
  Caulobacter crescentus NA1000 CCNA_01721 RNA polymerase ECF sigma factor sig. 31 98
  Caulobacter crescentus NA1000 Δfur CCNA_01721 RNA polymerase ECF sigma factor insig. 31 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1974 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 24 86
  Lysobacter sp. OAE881 ABIE51_RS16295 sigma-70 family RNA polymerase sigma factor insig. 31 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 29 79
  Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 29 77
  Pseudomonas sp. S08-1 OH686_20045 RNA polymerase sigma factor RpoE strong 28 89
  Pseudomonas fluorescens SBW25 PFLU_RS07230 RNA polymerase sigma factor RpoE sig. 28 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07230 RNA polymerase sigma factor RpoE strong 28 89
  Pseudomonas sp. DMC3 GFF2277 RNA polymerase sigma-H factor cofit 28 89
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01572 RNA polymerase sigma-H factor cofit 28 89
  Pseudomonas sp. RS175 PFR28_00690 RNA polymerase sigma-H factor strong 28 89
  Pseudomonas orientalis W4I3 QF045_RS09835 RNA polymerase sigma factor RpoE cofit 28 89
  Pseudomonas simiae WCS417 PS417_07120 RNA polymerase sigma-H factor strong 28 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT sig. 28 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT no data 28 89
  Pseudomonas fluorescens FW300-N2E3 AO353_17625 RNA polymerase subunit sigma strong 28 89
  Pseudomonas fluorescens FW300-N2C3 AO356_04575 RNA polymerase subunit sigma strong 28 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT strong 28 89
  Sphingobium sp. HT1-2 GFF5325 RNA polymerase ECF-type sigma factor cofit 28 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12340 RNA polymerase sigma-70 factor cofit 24 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23205 hypothetical protein insig. 24 92
  Phocaeicola dorei CL03T12C01 ABI39_RS00235 sigma-70 family RNA polymerase sigma factor sig. 35 49
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12005 RNA polymerase sigma factor RpoE no data 30 96
  Phocaeicola dorei CL03T12C01 ABI39_RS07815 RNA polymerase sigma factor strong 29 74
  Agrobacterium fabrum C58 Atu4160 RNA polymerase sigma factor strong 24 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12805 RNA polymerase sigma factor strong 29 74
  Rhodopseudomonas palustris CGA009 TX73_023085 RNA polymerase sigma factor cofit 27 97
  Bacteroides stercoris CC31F HMPREF1181_RS16950 RNA polymerase sigma factor strong 26 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24230 RNA polymerase sigma factor strong 25 86
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03400 hypothetical protein insig. 34 42
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00650 RNA polymerase sigma factor insig. 31 89
  Rhizobium sp. OAE497 ABIE40_RS11455 RNA polymerase sigma factor insig. 30 76
  Mycobacterium tuberculosis H37Rv Rv0735 Probable alternative RNA polymerase sigma factor SigL insig. 28 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 20 80
  Bacteroides ovatus ATCC 8483 BACOVA_05268 Sigma-70 region 2 insig. 23 95
  Rhizobium sp. OAE497 ABIE40_RS03400 RNA polymerase sigma factor insig. 31 90
  Azospirillum brasilense Sp245 AZOBR_RS23735 RNA polymerase no data 30 81
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 29 79
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 26 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00665 RNA polymerase subunit sigma-24 strong 25 94
  Xanthobacter sp. DMC5 GFF3078 ECF RNA polymerase sigma factor RpoE insig. 22 88
  Pseudomonas putida KT2440 PP_0865 ECF subfamily RNA polymerase sigma-24 factor insig. 30 80
  Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 26 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11095 hypothetical protein insig. 23 87
  Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 29 96
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 31 73
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 31 73
  Pseudomonas sp. BP01 JOY50_RS22705 RNA polymerase sigma factor insig. 31 80
  Pseudomonas aeruginosa MRSN321 DY961_RS08690 rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma RNA polymerase sigma factor RpoE strong 29 89
  Pseudomonas aeruginosa PA14 IKLFDK_03265 alginate biosynthesis protein AlgZ/FimS strong 29 89
  Pseudomonas aeruginosa PUPa3 DQ20_RS44160 rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma RNA polymerase sigma factor RpoE strong 29 89
  Bacteroides stercoris CC31F HMPREF1181_RS10020 RNA polymerase sigma-70 factor cofit 27 89
  Cupriavidus basilensis FW507-4G11 RR42_RS05810 RNA polymerase sigma factor insig. 26 96
  Bacteroides thetaiotaomicron VPI-5482 BT4461 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 23 88
  Shewanella sp. ANA-3 Shewana3_2465 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 22 93
  Rhodanobacter sp. FW510-T8 OKGIIK_01380 rpoE RNA polymerase subunit sigma-24 insig. 30 86
  Pseudomonas sp. SVBP6 COO64_RS04025 sigma-70 family RNA polymerase sigma factor insig. 31 80
  Rhodanobacter denitrificans MT42 LRK55_RS16655 RNA polymerase sigma factor RpoE no data 28 89
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16940 RNA polymerase sigma factor RpoE strong 28 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11995 RNA polymerase subunit sigma insig. 28 80
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4324 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 25 81
  Bacteroides ovatus ATCC 8483 BACOVA_00284 RNA polymerase sigma-70 factor insig. 24 92
  Bacteroides ovatus ATCC 8483 BACOVA_04399 Sigma-70 region 2 insig. 21 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02732 RNA polymerase sigma-70 factor, ECF subfamily insig. 26 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16550 RNA polymerase sigma factor strong 25 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12140 hypothetical protein insig. 24 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2891 RNA polymerase sigma factor, sigma-70 family insig. 23 89
  Herbaspirillum seropedicae SmR1 HSERO_RS03905 RNA polymerase subunit sigma-24 insig. 28 83
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 21 92
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 32 73
  Pseudomonas sp. DMC3 GFF1353 putative RNA polymerase sigma factor FecI cofit 31 79
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04785 sigma-70 family RNA polymerase sigma factor insig. 31 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3183.1 RNA polymerase sigma factor RpoE insig. 28 89
  Pseudomonas stutzeri RCH2 Psest_3100 RNA polymerase sigma factor RpoE strong 28 89
  Bacteroides ovatus ATCC 8483 BACOVA_02205 Sigma-70 region 2 sig. 26 81
  Marinobacter adhaerens HP15 HP15_270 RNA polymerase, sigma-24 subunit, ECF subfamily cofit 25 72
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11895 hypothetical protein insig. 23 99
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 29 75
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 28 77
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05820 RNA polymerase sigma-70 factor insig. 28 72
  Bacteroides thetaiotaomicron VPI-5482 BT1817 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 27 86
  Paraburkholderia graminis OAS925 ABIE53_006215 RNA polymerase sigma-70 factor (ECF subfamily) insig. 27 77