Homologs of GFF3817 from Variovorax sp. SCN45

RNA polymerase sigma factor
SEED: RNA polymerase sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3817 RNA polymerase sigma factor insig. 100 100
o Variovorax sp. OAS795 ABID97_RS08165 sigma-70 family RNA polymerase sigma factor insig. 92 97
o Acidovorax sp. GW101-3H11 Ac3H11_1622 RNA polymerase sigma factor insig. 71 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor insig. 57 94
o Ralstonia solanacearum PSI07 RPSI07_RS13090 DNA-directed RNA polymerase sigma-70 factor insig. 52 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor insig. 57 88
o Ralstonia solanacearum UW163 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor insig. 57 88
o Cupriavidus basilensis FW507-4G11 RR42_RS15915 RNA polymerase subunit sigma-24 insig. 54 85
o Ralstonia solanacearum GMI1000 RS_RS11855 DNA-directed RNA polymerase sigma-70 factor insig. 54 96
o Burkholderia phytofirmans PsJN BPHYT_RS22710 XRE family transcriptional regulator sig. 48 98
o Rahnella sp. WP5 EX31_RS18905 sigma-70 family RNA polymerase sigma factor insig. 41 95
o Pseudomonas fluorescens SBW25 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 40 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 40 91
o Pseudomonas protegens RBAN4 FABNJH_28815 sigK RNA polymerase sigma factor SigK insig. 42 95
  Enterobacter asburiae PDN3 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family cofit 38 90
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS19925 sigma-70 family RNA polymerase sigma factor insig. 39 95
o Pseudomonas fluorescens FW300-N2E3 AO353_07625 RNA polymerase subunit sigma-70 insig. 39 95
o Rhodanobacter sp. FW510-T8 OKGIIK_05040 RNA polymerase subunit sigma insig. 38 95
o Marinobacter adhaerens HP15 HP15_950 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 35 98
o Pantoea sp. MT58 IAI47_19735 sigma-70 family RNA polymerase sigma factor insig. 40 95
  Pseudomonas orientalis W4I3 QF045_RS00535 sigma-70 family RNA polymerase sigma factor cofit 40 87
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS01495 sigma-70 family RNA polymerase sigma factor insig. 38 91
  Acidovorax sp. GW101-3H11 Ac3H11_1599 RNA polymerase sigma factor insig. 38 94
  Burkholderia phytofirmans PsJN BPHYT_RS21845 hypothetical protein insig. 41 90
  Pseudomonas segetis P6 ACVTMO_RS06730 sigma-70 family RNA polymerase sigma factor insig. 38 94
  Marinobacter adhaerens HP15 HP15_3899 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 36 92
  Bosea sp. OAE506 ABIE41_RS11620 sigma-70 family RNA polymerase sigma factor insig. 37 85
o Rhodopseudomonas palustris CGA009 TX73_008400 sigma-70 family RNA polymerase sigma factor insig. 34 92
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1715 RNA polymerase sigma factor, sigma-70 family insig. 37 91
  Agrobacterium fabrum C58 Atu0474 putative RNA polymerase sigma-70 factor insig. 39 85
o Rhizobium sp. OAE497 ABIE40_RS01975 sigma-70 family RNA polymerase sigma factor insig. 37 92
o Alteromonas macleodii MIT1002 MIT1002_03202 Sigma-K factor insig. 37 90
  Agrobacterium fabrum C58 Atu1982 sigma factor insig. 34 92
  Variovorax sp. SCN45 GFF4503 RNA polymerase sigma factor insig. 38 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF365 RNA polymerase sigma factor insig. 40 93
  Pseudomonas simiae WCS417 PS417_12610 RNA polymerase sigma factor sig. 36 85
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3601.1 RNA polymerase sigma-70 factor insig. 36 93
  Pseudomonas fluorescens SBW25 PFLU_RS13305 sigma-70 family RNA polymerase sigma factor insig. 37 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13305 sigma-70 family RNA polymerase sigma factor sig. 37 85
  Pseudomonas orientalis W4I3 QF045_RS17270 sigma-70 family RNA polymerase sigma factor insig. 35 85
  Pseudomonas sp. DMC3 GFF1392 ECF RNA polymerase sigma factor SigK cofit 36 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01465 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 92
o Kangiella aquimarina DSM 16071 B158DRAFT_0930 RNA polymerase sigma factor, sigma-70 family insig. 32 95
  Pseudomonas syringae pv. syringae B728a Psyr_0362 Sigma-70 region 2 insig. 37 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0362 Sigma-70 region 2 insig. 37 85
  Mycobacterium tuberculosis H37Rv Rv0445c Alternative RNA polymerase sigma factor SigK insig. 32 93
  Shewanella amazonensis SB2B Sama_2036 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 35 86
  Rhodopseudomonas palustris CGA009 TX73_009355 sigma-70 family RNA polymerase sigma factor insig. 36 87
  Marinobacter adhaerens HP15 HP15_p187g100 RNA polymerase sigma factor insig. 33 83
  Pseudomonas putida KT2440 PP_3006 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 95
  Pseudomonas sp. BP01 JOY50_RS12975 sigma-70 family RNA polymerase sigma factor insig. 31 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_11715 RNA polymerase subunit sigma insig. 32 95
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02680 RNA polymerase subunit sigma-70 insig. 30 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24900 RNA polymerase subunit sigma-70 insig. 30 87
  Bosea sp. OAE506 ABIE41_RS10280 sigma-70 family RNA polymerase sigma factor insig. 34 83
  Shewanella oneidensis MR-1 SO1986 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 32 95
  Phaeobacter inhibens DSM 17395 PGA1_c27510 'RNA polymerase sigma factor (sigma-70 family; ECF11 subgroup)' insig. 36 84
  Phocaeicola dorei CL03T12C01 ABI39_RS02030 RNA polymerase sigma-70 factor insig. 33 90
  Cellulophaga baltica 18 M666_RS08870 RNA polymerase sigma factor insig. 28 87
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18855 RNA polymerase sigma factor insig. 28 91
  Pseudomonas sp. S08-1 OH686_11525 hypothetical protein cofit 35 82
  Synechococcus elongatus PCC 7942 Synpcc7942_2004 sigI RNA polymerase sigma factor insig. 34 82
  Rhodospirillum rubrum S1H Rru_A0722 Sigma-24 (FecI) (NCBI) insig. 34 91
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05845 sigma-70 family RNA polymerase sigma factor insig. 39 71
  Synechocystis sp000284455 PCC 6803 SGL_RS14165 sigma-70 family RNA polymerase sigma factor insig. 35 90
  Shewanella sp. ANA-3 Shewana3_2465 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 31 92
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 29 89
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma insig. 31 96
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 32 87
  Azospirillum brasilense Sp245 AZOBR_RS21190 RNA polymerase sigma factor RpoE insig. 32 86
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 29 95
  Burkholderia phytofirmans PsJN BPHYT_RS24975 RNA polymerase sigma24 factor strong 31 95
  Rhizobium sp. OAE497 ABIE40_RS18210 sigma-70 family RNA polymerase sigma factor insig. 37 85
  Rhizobium sp. OAE497 ABIE40_RS26955 sigma-70 family RNA polymerase sigma factor insig. 33 84
  Dinoroseobacter shibae DFL-12 Dshi_0366 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 31 89
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 29 92
  Caulobacter crescentus NA1000 CCNA_00685 RNA polymerase sigma factor sig. 30 90
  Caulobacter crescentus NA1000 Δfur CCNA_00685 RNA polymerase sigma factor cofit 30 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4608 RNA polymerase sigma factor, sigma-70 family insig. 26 86
  Dinoroseobacter shibae DFL-12 Dshi_2428 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 33 90
  Bacteroides thetaiotaomicron VPI-5482 BT0188 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 30 91
  Azospirillum sp. SherDot2 MPMX19_05229 ECF RNA polymerase sigma factor RpoE insig. 28 94
  Dinoroseobacter shibae DFL-12 Dshi_3423 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 32 93
  Bacteroides ovatus ATCC 8483 BACOVA_05268 Sigma-70 region 2 insig. 26 93
  Bacteroides ovatus ATCC 8483 BACOVA_01251 RNA polymerase sigma-70 factor sig. 30 87
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS20505 sigma-70 family RNA polymerase sigma factor insig. 34 88
  Paraburkholderia graminis OAS925 ABIE53_005321 RNA polymerase sigma factor (sigma-70 family) sig. 31 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02732 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 93
  Cellulophaga baltica 18 M666_RS18525 RNA polymerase sigma factor insig. 24 89
  Bacteroides stercoris CC31F HMPREF1181_RS04900 RNA polymerase sigma-70 factor insig. 30 96
  Agrobacterium fabrum C58 Atu3084 RNA polymerase sigma factor insig. 32 88
  Azospirillum brasilense Sp245 AZOBR_RS00810 RNA polymerase sigma factor RpoE insig. 31 91
  Rhodopseudomonas palustris CGA009 TX73_024905 sigma-70 family RNA polymerase sigma factor insig. 33 87
  Marinobacter adhaerens HP15 HP15_270 RNA polymerase, sigma-24 subunit, ECF subfamily cofit 27 89
  Pseudomonas protegens RBAN4 FABNJH_20920 RNA polymerase sigma factor insig. 32 93
  Erwinia amylovora T8 OLJFJH_08545 RNA polymerase subunit sigma-70 insig. 31 87
  Pseudomonas simiae WCS417 PS417_11995 RNA polymerase sigma factor insig. 31 93
  Magnetospirillum magneticum AMB-1 AMB_RS14160 RNA polymerase sigma factor cofit 30 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2047 RNA polymerase sigma factor, sigma-70 family strong 26 92
  Pseudomonas fluorescens SBW25 PFLU_RS12745 RNA polymerase sigma factor insig. 32 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12745 RNA polymerase sigma factor insig. 32 93
  Azospirillum sp. SherDot2 MPMX19_02022 ECF RNA polymerase sigma factor RpoE insig. 30 84
  Rhodanobacter denitrificans MT42 LRK55_RS07240 sigma-70 family RNA polymerase sigma factor insig. 29 96
  Xanthobacter sp. DMC5 GFF3078 ECF RNA polymerase sigma factor RpoE insig. 30 92
  Shewanella loihica PV-4 Shew_1476 RNA polymerase sigma factor (RefSeq) insig. 30 92
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 30 93
  Cupriavidus basilensis FW507-4G11 RR42_RS05810 RNA polymerase sigma factor insig. 28 93
  Bacteroides ovatus ATCC 8483 BACOVA_04812 RNA polymerase sigma-70 factor insig. 28 83
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor insig. 28 96
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 30 87
  Pseudomonas aeruginosa MRSN321 DY961_RS08690 rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma RNA polymerase sigma factor RpoE strong 28 87
  Pseudomonas aeruginosa PA14 IKLFDK_03265 alginate biosynthesis protein AlgZ/FimS strong 28 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS44160 rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma RNA polymerase sigma factor RpoE strong 28 87
  Pseudomonas segetis P6 ACVTMO_RS06940 rpoE RNA polymerase sigma factor RpoE strong 28 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3981 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 28 95
  Phocaeicola dorei CL03T12C01 ABI39_RS00235 sigma-70 family RNA polymerase sigma factor sig. 28 84
  Bacteroides thetaiotaomicron VPI-5482 BT3277 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 31 90
  Bacteroides thetaiotaomicron VPI-5482 BT4461 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 25 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00075 RNA polymerase sigma factor cofit 31 79
  Pseudomonas syringae pv. syringae B728a Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 28 84
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 28 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19950 RNA polymerase subunit sigma-24 insig. 32 80
  Bacteroides thetaiotaomicron VPI-5482 BT3993 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 29 82
  Xanthobacter sp. DMC5 GFF223 hypothetical protein insig. 28 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07720 sigma-70 family RNA polymerase sigma factor strong 28 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4220 RNA polymerase sigma factor RpoE insig. 31 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 29 88
  Variovorax sp. SCN45 GFF4544 RNA polymerase sigma factor RpoE insig. 30 83
  Pseudomonas sp. S08-1 OH686_20045 RNA polymerase sigma factor RpoE strong 28 87
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 30 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07365 RNA polymerase sigma factor insig. 28 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07715 RNA polymerase sigma factor no data 29 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 26 86
  Rhodospirillum rubrum S1H Rru_A2537 Sigma-24 (FecI) (NCBI) insig. 33 91
  Bacteroides thetaiotaomicron VPI-5482 BT1817 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 27 89
  Paraburkholderia graminis OAS925 ABIE53_002003 RNA polymerase sigma factor (sigma-70 family) sig. 36 71
  Azospirillum sp. SherDot2 MPMX19_05742 hypothetical protein insig. 29 92
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10790 RNA polymerase sigma factor insig. 28 89
  Pseudomonas fluorescens SBW25 PFLU_RS07230 RNA polymerase sigma factor RpoE sig. 28 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07230 RNA polymerase sigma factor RpoE strong 28 87
  Pseudomonas sp. BP01 JOY50_RS14665 rpoE RNA polymerase sigma factor RpoE insig. 28 87
  Pseudomonas sp. DMC3 GFF2277 RNA polymerase sigma-H factor cofit 28 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01572 RNA polymerase sigma-H factor cofit 28 87
  Pseudomonas protegens RBAN4 FABNJH_07555 algU alginate biosynthesis protein AlgZ/FimS insig. 28 87
  Pseudomonas sp. RS175 PFR28_00690 RNA polymerase sigma-H factor strong 28 87
  Pseudomonas orientalis W4I3 QF045_RS09835 RNA polymerase sigma factor RpoE cofit 28 87
  Pseudomonas putida KT2440 PP_1427 RNA polymerase sigma E factor sig. 28 87
  Pseudomonas simiae WCS417 PS417_07120 RNA polymerase sigma-H factor strong 28 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT sig. 28 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT no data 28 87
  Pseudomonas fluorescens FW300-N2C3 AO356_04575 RNA polymerase subunit sigma strong 28 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT strong 28 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14155 RNA polymerase sigma-70 factor insig. 26 91
  Bacteroides ovatus ATCC 8483 BACOVA_00284 RNA polymerase sigma-70 factor insig. 24 94
  Variovorax sp. OAS795 ABID97_RS21515 sigma-70 family RNA polymerase sigma factor no data 30 79
  Pseudomonas fluorescens FW300-N2E3 AO353_17625 RNA polymerase subunit sigma strong 28 87
  Caulobacter crescentus NA1000 CCNA_02837 RNA polymerase ECF-type sigma factor insig. 28 89
  Caulobacter crescentus NA1000 Δfur CCNA_02837 RNA polymerase ECF-type sigma factor cofit 28 89
  Phocaeicola dorei CL03T12C01 ABI39_RS03325 RNA polymerase sigma-70 factor insig. 28 80
  Herbaspirillum seropedicae SmR1 HSERO_RS03905 RNA polymerase subunit sigma-24 insig. 30 77
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 29 95
  Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 28 92
  Pseudomonas sp. SVBP6 COO64_RS16525 rpoE RNA polymerase sigma factor RpoE insig. 28 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 27 87
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10600 RNA polymerase subunit sigma-24 strong 26 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02650 RNA polymerase sigma factor insig. 22 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07135 RNA polymerase sigma factor insig. 28 92
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21720 RNA polymerase subunit sigma-70 insig. 24 97
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12005 RNA polymerase sigma factor RpoE no data 28 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 28 89
  Herbaspirillum seropedicae SmR1 HSERO_RS12085 RNA polymerase sigma-E factor protein insig. 26 96
  Alteromonas macleodii MIT1002 MIT1002_02682 Sigma-W factor strong 26 82
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00665 RNA polymerase subunit sigma-24 strong 25 84
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01435 RNA polymerase sigma factor insig. 23 94
  Rhodopseudomonas palustris CGA009 TX73_023085 RNA polymerase sigma factor cofit 28 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09005 RNA polymerase sigma-70 factor sig. 28 80
  Bacteroides ovatus ATCC 8483 BACOVA_02037 RNA polymerase sigma-70 factor insig. 23 97
  Pantoea sp. MT58 IAI47_20240 sigma-70 family RNA polymerase sigma factor insig. 30 88
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 27 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 27 87
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 27 87
  Bacteroides ovatus ATCC 8483 BACOVA_02117 RNA polymerase sigma-70 factor insig. 25 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS22515 RNA polymerase sigma factor insig. 35 70
  Burkholderia phytofirmans PsJN BPHYT_RS08845 RNA polymerase sigma factor insig. 34 68
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3924 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 23 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02674 hypothetical protein cofit 31 93
  Mycobacterium tuberculosis H37Rv Rv0735 Probable alternative RNA polymerase sigma factor SigL insig. 29 83
  Rhodanobacter denitrificans MT42 LRK55_RS16655 RNA polymerase sigma factor RpoE no data 28 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16940 RNA polymerase sigma factor RpoE strong 28 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 27 89
  Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 27 89
  Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 27 89
  Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 27 89
  Shewanella oneidensis MR-1 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 27 83
  Phocaeicola dorei CL03T12C01 ABI39_RS01635 RNA polymerase sigma-70 factor insig. 26 87
  Cupriavidus basilensis FW507-4G11 RR42_RS16520 RNA polymerase sigma factor insig. 33 68
  Sphingobium sp. HT1-2 GFF5333 sigma factor cofit 31 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13700 hypothetical protein insig. 27 90
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13970 RNA polymerase sigma factor cofit 26 78
  Bacteroides stercoris CC31F HMPREF1181_RS10020 RNA polymerase sigma-70 factor cofit 24 91
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 28 89
  Pseudomonas syringae pv. syringae B728a Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 27 87
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE strong 27 87
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 25 93
  Cellulophaga baltica 18 M666_RS18230 RNA polymerase sigma factor insig. 25 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3527 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 24 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04025 RNA polymerase sigma factor insig. 28 80
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 27 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05665 RNA polymerase sigma-70 factor insig. 25 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS16180 RNA polymerase sigma factor insig. 30 95
  Bacteroides thetaiotaomicron VPI-5482 BT2044 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 30 72
  Bacteroides ovatus ATCC 8483 BACOVA_02727 RNA polymerase sigma-70 factor insig. 20 83
  Pseudomonas fluorescens SBW25 PFLU_RS24340 sigma-70 family RNA polymerase sigma factor insig. 32 75
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24340 sigma-70 family RNA polymerase sigma factor strong 32 75
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12120 RNA polymerase sigma factor strong 31 76
  Phocaeicola dorei CL03T12C01 ABI39_RS04680 RNA polymerase sigma factor insig. 30 76
  Bacteroides stercoris CC31F HMPREF1181_RS05860 sigma-70 family RNA polymerase sigma factor insig. 29 75
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09115 hypothetical protein strong 26 86
  Pseudomonas stutzeri RCH2 Psest_3100 RNA polymerase sigma factor RpoE strong 26 87
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03685 sigma-70 family RNA polymerase sigma factor insig. 31 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 23 92
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 30 69
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03400 hypothetical protein insig. 29 86
  Pseudomonas sp. DMC3 GFF5154 hypothetical protein insig. 29 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00160 hypothetical protein insig. 29 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13725 sigma-70 family RNA polymerase sigma factor strong 27 85
  Bacteroides ovatus ATCC 8483 BACOVA_02488 RNA polymerase sigma-70 factor insig. 21 89
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 28 89
  Alteromonas macleodii MIT1002 MIT1002_02719 Sigma-24 no data 28 87
  Variovorax sp. SCN45 GFF3863 RNA polymerase sigma factor RpoE insig. 28 92
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02390 RNA polymerase sigma-70 factor sig. 26 87
  Pseudomonas simiae WCS417 PS417_22700 RNA polymerase subunit sigma-24 strong 32 75
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22010 RNA polymerase sigma factor insig. 25 89
  Bacteroides thetaiotaomicron VPI-5482 BT3517 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 25 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2655 RNA polymerase sigma factor, sigma-70 family insig. 23 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS18240 RNA polymerase sigma factor insig. 30 88
  Rhodanobacter sp. FW510-T8 OKGIIK_03490 hypothetical protein insig. 30 78
  Shewanella loihica PV-4 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) cofit 29 87
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19085 RNA polymerase subunit sigma-24 insig. 27 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07180 RNA polymerase sigma factor RpoE strong 27 87
  Variovorax sp. SCN45 GFF6854 RNA polymerase ECF-type sigma factor insig. 33 72
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01799 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 71
  Castellaniella sp019104865 MT123 ABCV34_RS08355 RNA polymerase sigma factor RpoE strong 28 88
  Variovorax sp. OAS795 ABID97_RS08330 RNA polymerase sigma factor RpoE strong 26 93
  Cellulophaga baltica 18 M666_RS11420 RNA polymerase sigma factor insig. 24 80
  Bacteroides thetaiotaomicron VPI-5482 BT0752 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 22 89
  Xanthobacter sp. DMC5 GFF1406 RNA polymerase sigma-H factor insig. 31 89
  Pseudomonas orientalis W4I3 QF045_RS24870 sigma-70 family RNA polymerase sigma factor insig. 31 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05043 RNA polymerase sigma-70 factor, ECF subfamily no data 31 79
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04694 ECF RNA polymerase sigma factor SigE cofit 29 75