Homologs of GFF2607 from Xanthobacter sp. DMC5

hypothetical protein
SEED: Transcriptional regulator, MerR family

194 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF2607 hypothetical protein insig. 100 100
o Dechlorosoma suillum PS Dsui_2833 putative transcriptional regulator insig. 37 93
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08380 DNA-binding protein cofit 40 90
  Erwinia tracheiphila SCR3 LU632_RS22230 helix-turn-helix domain-containing protein cofit 40 90
  Cupriavidus basilensis FW507-4G11 RR42_RS05700 hypothetical protein insig. 40 90
  Dickeya dadantii 3937 DDA3937_RS21910 helix-turn-helix transcriptional regulator insig. 43 88
  Dickeya dianthicola 67-19 HGI48_RS08550 helix-turn-helix transcriptional regulator insig. 43 88
o Caulobacter crescentus NA1000 CCNA_02788 Xre-family transcriptional regulator insig. 40 93
o Caulobacter crescentus NA1000 Δfur CCNA_02788 Xre-family transcriptional regulator cofit 40 93
  Caulobacter crescentus NA1000 CCNA_02789 Xre-family transcriptional regulator insig. 41 92
  Caulobacter crescentus NA1000 Δfur CCNA_02789 Xre-family transcriptional regulator cofit 41 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS22690 XRE family transcriptional regulator insig. 38 96
  Pseudomonas simiae WCS417 PS417_24905 DNA-binding protein sig. 40 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01814 transcriptional regulator, XRE family with cupin sensor insig. 38 97
  Azospirillum brasilense Sp245 AZOBR_RS25390 transcriptional regulator insig. 39 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS16640 XRE family transcriptional regulator insig. 40 93
o Sinorhizobium meliloti 1021 SMc02184 transcriptional regulator insig. 40 99
  Rhodopseudomonas palustris CGA009 TX73_013495 XRE family transcriptional regulator insig. 36 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS16530 XRE family transcriptional regulator insig. 39 86
  Escherichia coli ECRC100 OKFHMN_11715 hipB Transcriptional regulator, contains XRE-family HTH domain cofit 36 100
  Escherichia coli ECRC101 MCAODC_02230 hipB Transcriptional regulator, contains XRE-family HTH domain insig. 36 100
  Escherichia coli ECRC102 NIAGMN_09565 hipB Transcriptional regulator, contains XRE-family HTH domain insig. 36 100
  Escherichia coli ECRC99 KEDOAH_16430 hipB Transcriptional regulator, contains XRE-family HTH domain no data 36 100
  Magnetospirillum magneticum AMB-1 AMB_RS02475 XRE family transcriptional regulator insig. 35 97
  Sphingobium sp. HT1-2 GFF1865 Transcriptional regulator, Xre family cofit 40 99
  Variovorax sp. SCN45 GFF1264 Transcriptional regulator, Xre family insig. 39 82
  Burkholderia phytofirmans PsJN BPHYT_RS35975 Xre family transcriptional regulator insig. 41 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03588 transcriptional regulator, XRE family with cupin sensor sig. 39 86
  Paraburkholderia graminis OAS925 ABIE53_004670 transcriptional regulator with XRE-family HTH domain sig. 39 86
  Shewanella sp. ANA-3 Shewana3_3803 XRE family transcriptional regulator (RefSeq) cofit 34 82
  Burkholderia phytofirmans PsJN BPHYT_RS34660 DNA-binding protein sig. 39 86
  Shewanella oneidensis MR-1 SOA0002 type II restriction-modification system activator, putative (NCBI ptt file) strong 38 88
  Pseudomonas sp. DMC3 GFF1048 HTH-type transcriptional regulator SutR no data 34 85
  Alteromonas macleodii MIT1002 MIT1002_03074 HTH-type transcriptional regulator PuuR insig. 41 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20215 transcriptional regulator insig. 36 85
  Rahnella sp. WP5 EX31_RS03010 helix-turn-helix domain-containing protein sig. 33 93
  Pectobacterium carotovorum WPP14 HER17_RS21700 XRE family transcriptional regulator cofit 30 93
  Ralstonia solanacearum GMI1000 RS_RS21755 XRE family transcriptional regulator sig. 39 90
  Pseudomonas aeruginosa MRSN321 DY961_RS21170 XRE family transcriptional regulator no data 39 92
  Pseudomonas aeruginosa PA14 IKLFDK_09190 transcriptional regulator no data 39 92
  Pseudomonas aeruginosa PUPa3 DQ20_RS55240 XRE family transcriptional regulator insig. 39 92
  Xanthobacter sp. DMC5 GFF1030 HTH-type transcriptional regulator SutR insig. 38 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19390 XRE family transcriptional regulator sig. 44 76
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2584 Predicted transcriptional regulators insig. 33 96
  Rhodospirillum rubrum S1H Rru_A2614 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) insig. 35 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2260 Transcriptional regulator insig. 33 89
  Pseudomonas putida KT2440 PP_2232 XRE family transcriptional regulator sig. 38 97
  Cupriavidus basilensis FW507-4G11 RR42_RS28290 DNA-binding protein strong 36 85
  Klebsiella michiganensis M5al BWI76_RS00575 DNA-binding protein strong 33 93
  Ralstonia solanacearum GMI1000 RS_RS15735 XRE family transcriptional regulator insig. 41 82
  Pseudomonas sp. BP01 JOY50_RS12560 helix-turn-helix domain-containing protein insig. 39 92
  Rhizobium sp. OAE497 ABIE40_RS01060 XRE family transcriptional regulator insig. 38 83
  Pseudomonas fluorescens SBW25 PFLU_RS18830 helix-turn-helix domain-containing protein insig. 36 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18830 helix-turn-helix domain-containing protein strong 36 92
  Pseudomonas sp. S08-1 OH686_23020 Transcriptional regulator, Xre family insig. 35 88
  Acinetobacter baumannii LAC-4 RR41_RS01095 XRE family transcriptional regulator insig. 31 93
  Pseudomonas segetis P6 ACVTMO_RS09680 helix-turn-helix domain-containing protein insig. 41 85
  Escherichia coli ECRC100 OKFHMN_28185 hipB transcriptional regulator no data 37 82
  Escherichia coli ECRC101 MCAODC_21985 hipB transcriptional regulator insig. 37 82
  Escherichia coli ECRC102 NIAGMN_28035 hipB transcriptional regulator no data 37 82
  Escherichia coli ECRC98 JDDGAC_06315 hipB transcriptional regulator sig. 37 82
  Escherichia coli ECRC99 KEDOAH_25120 hipB transcriptional regulator no data 37 82
  Pseudomonas orientalis W4I3 QF045_RS18555 XRE family transcriptional regulator cofit 36 92
  Pseudomonas simiae WCS417 PS417_16820 Cro/Cl family transcriptional regulator no data 36 92
  Rahnella sp. WP5 EX31_RS21645 XRE family transcriptional regulator insig. 35 96
  Pantoea sp. MT58 IAI47_21310 helix-turn-helix domain-containing protein sig. 32 92
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS21925 helix-turn-helix domain-containing protein strong 32 92
  Klebsiella pneumoniae MKP103 KDGMDA_09135 transcriptional regulator insig. 31 93
  Klebsiella pneumoniae MRSN742743 KFA93_RS22610 helix-turn-helix domain-containing protein cofit 31 93
  Bacteroides ovatus ATCC 8483 BACOVA_02689 DNA-binding helix-turn-helix protein insig. 35 97
  Variovorax sp. OAS795 ABID97_RS06760 XRE family transcriptional regulator insig. 42 79
  Bosea sp. OAE506 ABIE41_RS03270 XRE family transcriptional regulator insig. 40 83
  Pseudomonas putida KT2440 PP_1935 Transcriptional regulator, Cro/CI family sig. 38 92
  Dickeya dianthicola 67-19 HGI48_RS08545 helix-turn-helix transcriptional regulator insig. 37 82
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2607 transcriptional regulator, XRE family with cupin sensor sig. 37 83
  Herbaspirillum seropedicae SmR1 HSERO_RS00085 transcriptional regulator insig. 36 89
  Cupriavidus basilensis FW507-4G11 RR42_RS21695 DNA-binding protein sig. 36 93
  Enterobacter asburiae PDN3 EX28DRAFT_4383 transcriptional regulator, XRE family with cupin sensor strong 31 89
  Rhizobium sp. OAE497 ABIE40_RS21490 XRE family transcriptional regulator sig. 41 85
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02590 helix-turn-helix transcriptional regulator no data 41 75
  Dickeya dadantii 3937 DDA3937_RS04070 helix-turn-helix transcriptional regulator strong 37 82
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03682 HTH-type transcriptional regulator SutR cofit 36 92
  Bosea sp. OAE506 ABIE41_RS13175 XRE family transcriptional regulator insig. 33 92
  Agrobacterium fabrum C58 Atu0245 transcriptional regulator insig. 39 82
  Escherichia coli Nissle 1917 ECOLIN_RS26340 helix-turn-helix transcriptional regulator cofit 36 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS06145 XRE family transcriptional regulator insig. 36 97
  Rhodopseudomonas palustris CGA009 TX73_011590 helix-turn-helix transcriptional regulator insig. 34 96
  Variovorax sp. OAS795 ABID97_RS07740 helix-turn-helix transcriptional regulator insig. 42 72
  Serratia liquefaciens MT49 IAI46_09015 helix-turn-helix transcriptional regulator no data 33 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09265 XRE family transcriptional regulator insig. 31 89
  Rahnella sp. WP5 EX31_RS05710 helix-turn-helix transcriptional regulator insig. 29 92
  Acinetobacter baumannii LAC-4 RR41_RS01325 XRE family transcriptional regulator insig. 41 75
  Shewanella loihica PV-4 Shew_1266 XRE family transcriptional regulator (RefSeq) insig. 39 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3971 Predicted transcriptional regulator insig. 38 89
  Shewanella loihica PV-4 Shew_3490 XRE family transcriptional regulator (RefSeq) insig. 35 86
  Ralstonia solanacearum PSI07 RPSI07_RS22035 XRE family transcriptional regulator insig. 35 86
  Ralstonia solanacearum GMI1000 RS_RS23520 XRE family transcriptional regulator no data 34 85
  Ralstonia solanacearum GMI1000 RS_RS23650 XRE family transcriptional regulator no data 34 85
  Ralstonia solanacearum GMI1000 RS_RS11670 XRE family transcriptional regulator insig. 33 86
  Klebsiella pneumoniae MKP103 KDGMDA_23150 XRE family transcriptional regulator insig. 27 99
  Klebsiella pneumoniae MRSN742743 KFA93_RS14180 helix-turn-helix domain-containing protein insig. 27 99
  Dickeya dadantii 3937 DDA3937_RS08405 helix-turn-helix transcriptional regulator no data 37 82
  Variovorax sp. SCN45 GFF1021 Transcriptional regulator, Xre-family with cupin domain insig. 35 92
  Phaeobacter inhibens DSM 17395 PGA1_c34340 putative HTH-type transcriptional regulator sig. 34 94
  Enterobacter sp. TBS_079 MPMX20_04570 HTH-type transcriptional regulator SutR strong 30 89
  Methanococcus maripaludis S2 MMP_RS01155 XRE family transcriptional regulator strong 29 86
  Pseudomonas fluorescens FW300-N2C3 AO356_20715 Cro/Cl family transcriptional regulator insig. 42 74
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14960 XRE family transcriptional regulator insig. 38 72
  Ralstonia solanacearum PSI07 RPSI07_RS18415 XRE family transcriptional regulator insig. 38 72
  Ralstonia solanacearum UW163 UW163_RS12430 XRE family transcriptional regulator no data 38 72
  Ralstonia solanacearum PSI07 RPSI07_RS18795 XRE family transcriptional regulator insig. 35 89
  Pseudomonas sp. SVBP6 COO64_RS19420 helix-turn-helix domain-containing protein insig. 34 92
  Variovorax sp. OAS795 ABID97_RS13245 XRE family transcriptional regulator insig. 40 67
  Pseudomonas aeruginosa MRSN321 DY961_RS19145 XRE family transcriptional regulator sig. 38 92
  Pseudomonas aeruginosa PA14 IKLFDK_06470 Cro/Cl family transcriptional regulator strong 38 92
  Burkholderia phytofirmans PsJN BPHYT_RS16515 2-hydroxyacid dehydrogenase insig. 37 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04234 transcriptional regulator, XRE family with cupin sensor insig. 37 82
  Paraburkholderia graminis OAS925 ABIE53_003474 transcriptional regulator with XRE-family HTH domain insig. 37 82
  Pseudomonas fluorescens FW300-N2C3 AO356_00130 XRE family transcriptional regulator strong 37 90
  Ralstonia solanacearum GMI1000 RS_RS05450 XRE family transcriptional regulator strong 35 89
  Acinetobacter radioresistens SK82 MPMX26_01241 HTH-type transcriptional regulator SutR strong 32 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05975 helix-turn-helix domain-containing protein insig. 47 74
  Pseudomonas aeruginosa PUPa3 DQ20_RS53270 XRE family transcriptional regulator sig. 38 92
  Pseudomonas orientalis W4I3 QF045_RS20030 helix-turn-helix transcriptional regulator insig. 37 90
  Acidovorax sp. GW101-3H11 Ac3H11_1308 Transcriptional regulator no data 36 85
  Pseudomonas syringae pv. syringae B728a Psyr_3250 Helix-turn-helix motif protein insig. 34 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3250 Helix-turn-helix motif protein insig. 34 92
  Castellaniella sp019104865 MT123 ABCV34_RS15905 helix-turn-helix transcriptional regulator no data 34 74
  Klebsiella michiganensis M5al BWI76_RS13955 hypothetical protein insig. 32 90
  Pseudomonas protegens RBAN4 FABNJH_09870 HTH cro/C1-type domain-containing protein insig. 39 75
  Paraburkholderia graminis OAS925 ABIE53_005446 XRE family aerobic/anaerobic benzoate catabolism transcriptional regulator insig. 38 74
  Variovorax sp. SCN45 GFF5178 Transcriptional regulator, Xre-family with cupin domain insig. 37 75
  Bacteroides thetaiotaomicron VPI-5482 BT2783 transcriptional regulator (NCBI ptt file) sig. 33 83
  Magnetospirillum magneticum AMB-1 AMB_RS00855 helix-turn-helix domain-containing protein cofit 32 79
  Pseudomonas sp. SVBP6 COO64_RS23115 helix-turn-helix domain-containing protein insig. 42 67
  Ralstonia solanacearum PSI07 RPSI07_RS09440 helix-turn-helix domain-containing protein insig. 39 82
  Ralstonia solanacearum UW163 UW163_RS16180 XRE family transcriptional regulator no data 38 89
  Azospirillum brasilense Sp245 AZOBR_RS02410 DNA-binding protein strong 37 83
  Burkholderia phytofirmans PsJN BPHYT_RS07145 DNA-binding protein insig. 35 76
  Ralstonia solanacearum UW163 UW163_RS11585 XRE family transcriptional regulator insig. 34 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5820 Transcriptional regulator, Cro/CI family strong 33 92
  Pantoea sp. MT58 IAI47_18980 helix-turn-helix domain-containing protein sig. 32 83
  Ralstonia solanacearum PSI07 RPSI07_RS25065 XRE family transcriptional regulator insig. 31 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS07155 helix-turn-helix transcriptional regulator insig. 28 93
  Shewanella sp. ANA-3 Shewana3_0319 XRE family transcriptional regulator (RefSeq) strong 26 92
  Sinorhizobium meliloti 1021 SMc00351 hypothetical protein insig. 44 67
  Ralstonia solanacearum GMI1000 RS_RS05775 XRE family transcriptional regulator insig. 40 65
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07835 helix-turn-helix domain-containing protein insig. 39 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS18270 XRE family transcriptional regulator insig. 39 75
  Pseudomonas fluorescens FW300-N2E3 AO353_21480 Cro/Cl family transcriptional regulator strong 34 92
  Phocaeicola dorei CL03T12C01 ABI39_RS13885 helix-turn-helix transcriptional regulator insig. 33 83
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17685 helix-turn-helix transcriptional regulator insig. 33 83
  Variovorax sp. SCN45 GFF3233 hypothetical protein no data 42 72
  Bacteroides ovatus ATCC 8483 BACOVA_01081 hypothetical protein insig. 32 83
  Bacteroides ovatus ATCC 8483 BACOVA_01302 DNA-binding helix-turn-helix protein insig. 41 71
  Pseudomonas fluorescens FW300-N2E3 AO353_00700 Cro/Cl family transcriptional regulator strong 39 75
  Pseudomonas fluorescens FW300-N2C3 AO356_06745 DNA-binding protein sig. 37 72
  Enterobacter sp. TBS_079 MPMX20_03983 hypothetical protein insig. 36 81
  Phocaeicola dorei CL03T12C01 ABI39_RS13480 helix-turn-helix transcriptional regulator insig. 35 83
  Enterobacter asburiae PDN3 EX28DRAFT_3141 transcriptional regulator, XRE family with cupin sensor insig. 34 81
  Pseudomonas protegens RBAN4 FABNJH_13660 DNA-binding domain/cupin domain protein insig. 34 92
  Pseudomonas stutzeri RCH2 Psest_3791 Predicted transcriptional regulators insig. 30 88
  Azospirillum sp. SherDot2 MPMX19_02581 HTH-type transcriptional regulator SutR insig. 42 72
  Ralstonia solanacearum UW163 UW163_RS05495 XRE family transcriptional regulator insig. 37 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5451 hypothetical protein insig. 37 79
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3201 Transcriptional regulator, MerR family strong 37 72
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3859 Transcriptional regulator, Cro/CI family insig. 39 75
  Cupriavidus basilensis FW507-4G11 RR42_RS18735 DNA-binding protein no data 38 92
  Paraburkholderia graminis OAS925 ABIE53_004168 transcriptional regulator with XRE-family HTH domain strong 36 76
  Paraburkholderia sabiae LMG 24235 QEN71_RS43315 helix-turn-helix transcriptional regulator strong 36 81
  Pantoea sp. MT58 IAI47_07115 HTH-type transcriptional regulator PuuR insig. 35 86
  Pseudomonas aeruginosa MRSN321 DY961_RS10735 cupin domain-containing protein insig. 35 79
  Pseudomonas aeruginosa PA14 IKLFDK_28600 Cro/Cl family transcriptional regulator insig. 35 79
  Pseudomonas aeruginosa PUPa3 DQ20_RS51325 cupin domain-containing protein insig. 35 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07920 XRE family transcriptional regulator cofit 35 86
  Ralstonia solanacearum UW163 UW163_RS05705 XRE family transcriptional regulator sig. 35 86
  Burkholderia phytofirmans PsJN BPHYT_RS22055 DNA-binding protein strong 35 76
  Bacteroides stercoris CC31F HMPREF1181_RS01200 helix-turn-helix transcriptional regulator insig. 32 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03130 transcriptional regulator, XRE family with cupin sensor insig. 35 76
  Dinoroseobacter shibae DFL-12 Dshi_1871 transcriptional regulator, XRE family (RefSeq) insig. 34 81
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01775 helix-turn-helix transcriptional regulator no data 26 85
  Azospirillum sp. SherDot2 MPMX19_05829 HTH-type transcriptional regulator PrpR insig. 35 83
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS07500 puuR HTH-type transcriptional regulator PuuR cofit 35 88
  Pseudomonas sp. BP01 JOY50_RS05765 helix-turn-helix domain-containing protein no data 33 79
  Pseudomonas putida KT2440 PP_2868 Transcriptional regulator, Cro/CI family strong 33 79
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1501 Predicted transcriptional regulators insig. 32 86
  Bacteroides stercoris CC31F HMPREF1181_RS02635 helix-turn-helix transcriptional regulator insig. 32 88
  Castellaniella sp019104865 MT123 ABCV34_RS00635 helix-turn-helix transcriptional regulator sig. 32 83
  Desulfovibrio vulgaris Miyazaki F DvMF_0794 transcriptional regulator, XRE family (RefSeq) strong 32 83
  Acidovorax sp. GW101-3H11 Ac3H11_839 transcriptional regulator, MerR family insig. 29 78
  Azospirillum sp. SherDot2 MPMX19_01829 hypothetical protein no data 44 79
  Pseudomonas sp. SVBP6 COO64_RS07465 helix-turn-helix domain-containing protein no data 38 88
  Rhodanobacter denitrificans MT42 LRK55_RS10465 helix-turn-helix transcriptional regulator cofit 33 75
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3690.1 Transcriptional regulator, XRE family protein cofit 39 79