Homologs of Psest_1804 from Pseudomonas stutzeri RCH2

Superfamily II DNA and RNA helicases
SEED: DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)
KEGG: ATP-dependent RNA helicase DeaD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_1804 Superfamily II DNA and RNA helicases strong 100 100
o Pseudomonas segetis P6 MPMX49_02165 ATP-dependent RNA helicase DeaD insig. 89 100
o Pseudomonas putida KT2440 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD no data 84 100
o Pseudomonas sp. RS175 PFR28_00980 ATP-dependent RNA helicase DeaD insig. 85 100
o Pseudomonas syringae pv. syringae B728a Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal no data 85 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal no data 85 100
o Pseudomonas sp. BP01 JOY50_RS17005 DEAD/DEAH box helicase insig. 84 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2247 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 85 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2450 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 85 100
o Pseudomonas fluorescens FW300-N2C3 AO356_03110 RNA helicase no data 84 100
o Pseudomonas simiae WCS417 PS417_08540 RNA helicase strong 85 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_265 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 85 100
o Pseudomonas fluorescens FW300-N2E3 AO353_19130 RNA helicase no data 85 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01840 ATP-dependent RNA helicase DeaD no data 85 100
o Pseudomonas sp. S08-1 OH686_22545 DEAD-box ATP-dependent RNA helicase DeaD ( CshA) cofit 84 100
o Pseudomonas fluorescens SBW25 PFLU_RS08490 DEAD/DEAH box helicase no data 85 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08490 DEAD/DEAH box helicase strong 85 100
o Pseudomonas sp. DMC3 GFF4601 ATP-dependent RNA helicase DeaD no data 84 100
o Pseudomonas aeruginosa PA14 IKLFDK_14425 ATP-dependent RNA helicase insig. 76 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07300 DEAD/DEAH box helicase insig. 49 98
o Rhodanobacter denitrificans MT42 LRK55_RS02405 DEAD/DEAH box helicase cofit 48 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02650 DEAD/DEAH box helicase insig. 48 98
o Rhodanobacter sp. FW510-T8 OKGIIK_09705 ATP-dependent RNA helicase cofit 48 98
o Kangiella aquimarina DSM 16071 B158DRAFT_1850 ATP-dependent RNA helicase CsdA (EC 5.99.1.-) insig. 47 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08990 DEAD/DEAH box helicase strong 48 97
o Alteromonas macleodii MIT1002 MIT1002_00666 Cold-shock DEAD box protein A strong 46 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1841.1 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) insig. 47 100
o Dechlorosoma suillum PS Dsui_1351 DNA/RNA helicase, superfamily II strong 47 100
o Shewanella amazonensis SB2B Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) strong 45 100
o Shewanella loihica PV-4 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 46 98
o Shewanella oneidensis MR-1 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) strong 45 99
o Klebsiella michiganensis M5al BWI76_RS25055 DEAD/DEAH family ATP-dependent RNA helicase no data 47 98
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_13975 DEAD/DEAH family ATP-dependent RNA helicase no data 47 99
o Erwinia tracheiphila SCR3 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase no data 47 98
o Serratia liquefaciens MT49 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase cofit 46 99
o Enterobacter asburiae PDN3 EX28DRAFT_3211 Superfamily II DNA and RNA helicases no data 45 98
o Pectobacterium carotovorum WPP14 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase insig. 45 99
o Rahnella sp. WP5 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase insig. 45 99
o Pantoea sp. MT58 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase strong 46 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09085 DEAD/DEAH family ATP-dependent RNA helicase cofit 45 98
o Shewanella sp. ANA-3 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 45 98
o Enterobacter sp. TBS_079 MPMX20_04066 ATP-dependent RNA helicase DeaD insig. 47 98
o Dickeya dianthicola 67-19 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase insig. 47 98
o Dickeya dianthicola ME23 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase no data 47 98
o Klebsiella pneumoniae MKP103 KDGMDA_05860 DEAD/DEAH family ATP-dependent RNA helicase strong 45 98
o Mycobacterium tuberculosis H37Rv Rv1253 Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog) insig. 48 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) strong 47 98
o Dickeya dadantii 3937 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase insig. 46 98
o Erwinia amylovora T8 OLJFJH_07275 DEAD/DEAH family ATP-dependent RNA helicase strong 45 98
o Escherichia coli ECOR38 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD strong 46 98
o Escherichia coli ECRC100 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD cofit 46 98
o Escherichia coli ECRC101 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD strong 46 98
o Escherichia coli ECRC102 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD cofit 46 98
o Escherichia coli ECRC98 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD strong 46 98
o Escherichia coli ECOR27 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD sig. 46 98
o Escherichia coli ECRC99 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD no data 46 98
o Escherichia coli BL21 ECD_03029 ATP-dependent RNA helicase sig. 46 98
o Escherichia fergusonii Becca EFB2_00661 ATP-dependent RNA helicase DeaD sig. 46 98
o Escherichia coli ECRC62 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD cofit 46 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00538 ATP-dependent RNA helicase DeaD sig. 46 98
o Escherichia coli Nissle 1917 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD sig. 46 98
o Escherichia coli BW25113 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) strong 46 98
  Lysobacter sp. OAE881 ABIE51_RS12265 DEAD/DEAH box helicase insig. 54 75
  Marinobacter adhaerens HP15 HP15_588 DEAD/DEAH box helicase domain protein sig. 53 72
o Vibrio cholerae E7946 ATCC 55056 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase insig. 41 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU3310 deaD ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) strong 43 94
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05910 RNA helicase strong 38 94
o Desulfovibrio vulgaris Miyazaki F DvMF_2125 DEAD/DEAH box helicase domain protein (RefSeq) no data 39 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3056 Superfamily II DNA and RNA helicases no data 37 98
o Methanococcus maripaludis JJ MMJJ_RS02855 DEAD/DEAH box helicase strong 37 97
o Methanococcus maripaludis S2 MMP_RS02420 DEAD/DEAH box helicase no data 37 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01495 DEAD/DEAH box helicase no data 35 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11910 DEAD/DEAH box helicase strong 36 97
o Phocaeicola dorei CL03T12C01 ABI39_RS04950 DEAD/DEAH box helicase strong 36 97
  Synechocystis sp000284455 PCC 6803 SGL_RS15320 DEAD/DEAH box helicase strong 45 69
o Cellulophaga baltica 18 M666_RS17990 DEAD/DEAH box helicase no data 35 97
o Bacteroides ovatus ATCC 8483 BACOVA_00904 DEAD/DEAH box helicase insig. 37 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15600 ATP-dependent RNA helicase no data 36 98
o Bacteroides thetaiotaomicron VPI-5482 BT3303 ATP-dependent RNA helicase (NCBI ptt file) sig. 36 98
o Fusobacterium nucleatum SB010 HUW76_10100 DEAD/DEAH box helicase strong 35 98
o Bacteroides stercoris CC31F HMPREF1181_RS02175 DEAD/DEAH box helicase sig. 35 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS06015 DEAD/DEAH box helicase insig. 35 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 45 66
  Caulobacter crescentus NA1000 CCNA_00878 ATP-dependent RNA helicase cofit 44 68
  Caulobacter crescentus NA1000 Δfur CCNA_00878 ATP-dependent RNA helicase cofit 44 68
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 44 67
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 44 67
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 44 67
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00535 DEAD/DEAH box helicase no data 42 64
  Azospirillum brasilense Sp245 AZOBR_RS22205 DNA helicase strong 44 65
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 44 66
  Pseudomonas sp. BP01 JOY50_RS09795 DEAD/DEAH box helicase insig. 43 66
  Acidovorax sp. GW101-3H11 Ac3H11_1125 ATP-dependent RNA helicase Bcep18194_A5658 no data 43 65
  Pseudomonas putida KT2440 PP_4980 ATP-dependent RNA helicase sig. 43 66
  Castellaniella sp019104865 MT123 ABCV34_RS13580 DEAD/DEAH box helicase sig. 46 66
  Agrobacterium fabrum C58 Atu2333 ATP-dependent RNA helicase strong 43 64
  Pseudomonas fluorescens SBW25 PFLU_RS28180 DEAD/DEAH box helicase cofit 43 66
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28180 DEAD/DEAH box helicase sig. 43 66
  Pseudomonas syringae pv. syringae B728a Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 43 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 43 66