Homologs of GFF1206 from Xanthobacter sp. DMC5

ECF RNA polymerase sigma factor SigF
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF1206 ECF RNA polymerase sigma factor SigF insig. 100 100
  Acidovorax sp. GW101-3H11 Ac3H11_1827 RNA polymerase sigma-70 factor, ECF subfamily insig. 48 95
o Variovorax sp. OAS795 ABID97_RS16825 sigma-70 family RNA polymerase sigma factor insig. 46 98
o Variovorax sp. SCN45 GFF320 RNA polymerase ECF-type sigma factor insig. 49 95
o Herbaspirillum seropedicae SmR1 HSERO_RS16195 RNA polymerase sigma factor insig. 47 97
o Bosea sp. OAE506 ABIE41_RS02435 sigma-70 family RNA polymerase sigma factor insig. 45 95
o Pseudomonas putida KT2440 PP_0994 putative RNA polymerase sigma factor insig. 43 96
o Dechlorosoma suillum PS Dsui_0155 RNA polymerase sigma factor, sigma-70 family strong 46 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS20845 sigma-70 family RNA polymerase sigma factor insig. 45 96
o Pseudomonas stutzeri RCH2 Psest_0114 RNA polymerase sigma factor, sigma-70 family insig. 41 96
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01090 sigma-70 family RNA polymerase sigma factor insig. 46 96
o Burkholderia phytofirmans PsJN BPHYT_RS25560 RNA polymerase sigma factor insig. 43 94
  Caulobacter crescentus NA1000 CCNA_03362 ECF-family RNA polymerase sigma factor strong 45 94
  Caulobacter crescentus NA1000 Δfur CCNA_03362 ECF-family RNA polymerase sigma factor cofit 45 94
  Burkholderia phytofirmans PsJN BPHYT_RS25505 RNA polymerase sigma factor insig. 44 96
  Rhodopseudomonas palustris CGA009 TX73_009325 sigma-70 family RNA polymerase sigma factor insig. 41 96
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3636 RNA polymerase sigma factor, sigma-70 family insig. 41 96
  Xanthobacter sp. DMC5 GFF2972 ECF RNA polymerase sigma factor SigF no data 37 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01786 RNA polymerase sigma-70 factor, ECF subfamily insig. 40 96
o Agrobacterium fabrum C58 Atu2268 ECF family sigma factor insig. 46 79
o Sphingobium sp. HT1-2 GFF5259 hypothetical protein insig. 43 78
  Sinorhizobium meliloti 1021 SM_b20531 RNA polymerase sigma factor insig. 38 93
  Rhizobium sp. OAE497 ABIE40_RS01010 sigma-70 family RNA polymerase sigma factor insig. 37 99
  Azospirillum sp. SherDot2 MPMX19_04570 ECF RNA polymerase sigma factor SigF insig. 36 96
  Erwinia amylovora T8 OLJFJH_08545 RNA polymerase subunit sigma-70 insig. 36 93
  Rhizobium sp. OAE497 ABIE40_RS19610 sigma-70 family RNA polymerase sigma factor insig. 35 98
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09080 sigma-70 family RNA polymerase sigma factor cofit 37 75
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13745 sigma-70 family RNA polymerase sigma factor insig. 34 94
  Pantoea sp. MT58 IAI47_20240 sigma-70 family RNA polymerase sigma factor insig. 33 94
  Rhodanobacter sp. FW510-T8 OKGIIK_03490 hypothetical protein insig. 36 86
  Shewanella amazonensis SB2B Sama_2036 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 31 98
  Rhodanobacter denitrificans MT42 LRK55_RS14380 sigma-70 family RNA polymerase sigma factor insig. 35 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14665 sigma-70 family RNA polymerase sigma factor insig. 35 91
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS13930 RNA polymerase sigma factor insig. 35 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3601.1 RNA polymerase sigma-70 factor insig. 34 92
  Azospirillum brasilense Sp245 AZOBR_RS00810 RNA polymerase sigma factor RpoE insig. 33 86
  Rhodanobacter sp. FW510-T8 OKGIIK_14520 rpoE RNA polymerase sigma factor insig. 29 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12920 RNA polymerase sigma-70 factor cofit 26 89
  Azospirillum brasilense Sp245 AZOBR_RS21190 RNA polymerase sigma factor RpoE insig. 31 67
  Rhodanobacter denitrificans MT42 LRK55_RS09165 RNA polymerase sigma factor insig. 29 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09505 RNA polymerase sigma factor insig. 29 93
  Mycobacterium tuberculosis H37Rv Rv3414c Probable alternative RNA polymerase sigma-D factor SigD sig. 31 92
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03310 RNA polymerase sigma factor insig. 31 86
  Azospirillum sp. SherDot2 MPMX19_02022 ECF RNA polymerase sigma factor RpoE insig. 35 63
  Rhodospirillum rubrum S1H Rru_A0722 Sigma-24 (FecI) (NCBI) insig. 33 83
  Kangiella aquimarina DSM 16071 B158DRAFT_0139 RNA polymerase sigma factor, sigma-70 family insig. 32 96
  Rhodanobacter sp. FW510-T8 OKGIIK_05040 RNA polymerase subunit sigma insig. 30 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05410 RNA polymerase sigma factor strong 29 74
  Sinorhizobium meliloti 1021 SMc01506 RNA polymerase sigma factor strong 30 71
  Dinoroseobacter shibae DFL-12 Dshi_0366 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 28 95
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 26 72
  Paraburkholderia graminis OAS925 ABIE53_003919 RNA polymerase sigma-70 factor (ECF subfamily) insig. 27 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24230 RNA polymerase sigma factor strong 30 81
  Pseudomonas sp. BP01 JOY50_RS12975 sigma-70 family RNA polymerase sigma factor insig. 29 92
  Shewanella sp. ANA-3 Shewana3_2465 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 25 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14775 sigma-70 family RNA polymerase sigma factor strong 33 70
  Shewanella oneidensis MR-1 SO1986 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 25 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF365 RNA polymerase sigma factor insig. 29 95
  Paraburkholderia graminis OAS925 ABIE53_003943 RNA polymerase sigma-70 factor (ECF subfamily) sig. 32 86
  Pseudomonas fluorescens FW300-N2E3 AO353_07625 RNA polymerase subunit sigma-70 insig. 30 87
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 29 86
  Xanthobacter sp. DMC5 GFF1406 RNA polymerase sigma-H factor insig. 31 98
  Pseudomonas fluorescens SBW25 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 30 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 30 92
  Variovorax sp. SCN45 GFF4558 RNA polymerase ECF-type sigma factor insig. 29 88
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12120 RNA polymerase sigma factor sig. 28 75
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01495 sigma-70 family RNA polymerase sigma factor insig. 30 93
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 32 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 27 69
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 29 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 29 87
  Sphingobium sp. HT1-2 GFF2317 RNA polymerase ECF-type sigma factor cofit 30 86
  Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 30 71
  Rhodospirillum rubrum S1H Rru_A2537 Sigma-24 (FecI) (NCBI) insig. 30 72
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05041 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 86
  Marinobacter adhaerens HP15 HP15_p187g100 RNA polymerase sigma factor insig. 28 92
  Phocaeicola dorei CL03T12C01 ABI39_RS04680 RNA polymerase sigma factor insig. 28 75
  Phocaeicola dorei CL03T12C01 ABI39_RS00860 RNA polymerase sigma-70 factor insig. 23 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 25 90
  Phocaeicola dorei CL03T12C01 ABI39_RS12815 sigma-70 family RNA polymerase sigma factor insig. 29 74
  Herbaspirillum seropedicae SmR1 HSERO_RS12085 RNA polymerase sigma-E factor protein insig. 26 96
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 22 98
  Rhodanobacter denitrificans MT42 LRK55_RS11045 sigma-70 family RNA polymerase sigma factor insig. 30 69
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11315 sigma-70 family RNA polymerase sigma factor insig. 30 69
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 30 96
  Pseudomonas putida KT2440 PP_3006 RNA polymerase sigma-70 factor, ECF subfamily insig. 29 95
  Bacteroides ovatus ATCC 8483 BACOVA_04312 Sigma-70 region 2 insig. 25 65
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma cofit 31 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16905 sigma-70 family RNA polymerase sigma factor insig. 29 74
  Ralstonia sp. UNC404CL21Col ABZR87_RS03700 RNA polymerase sigma factor insig. 27 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01700 RNA polymerase sigma factor insig. 24 97
  Sphingobium sp. HT1-2 GFF5325 RNA polymerase ECF-type sigma factor cofit 28 82
  Bacteroides ovatus ATCC 8483 BACOVA_05165 Sigma-70 region 2 insig. 26 77
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04205 sigma-70 family RNA polymerase sigma factor insig. 29 78
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10060 sigma-70 family RNA polymerase sigma factor insig. 29 88
  Bacteroides stercoris CC31F HMPREF1181_RS02545 sigma-70 family RNA polymerase sigma factor insig. 31 75
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 30 58
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor insig. 29 80
  Caulobacter crescentus NA1000 CCNA_00685 RNA polymerase sigma factor sig. 27 92
  Caulobacter crescentus NA1000 Δfur CCNA_00685 RNA polymerase sigma factor cofit 27 92