Homologs of GFF1206 from Xanthobacter sp. DMC5

ECF RNA polymerase sigma factor SigF
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF1206 ECF RNA polymerase sigma factor SigF insig. 100 100
  Acidovorax sp. GW101-3H11 Ac3H11_1827 RNA polymerase sigma-70 factor, ECF subfamily insig. 48 95
o Variovorax sp. OAS795 ABID97_RS16825 sigma-70 family RNA polymerase sigma factor insig. 46 98
o Variovorax sp. SCN45 GFF320 RNA polymerase ECF-type sigma factor insig. 49 95
o Herbaspirillum seropedicae SmR1 HSERO_RS16195 RNA polymerase sigma factor insig. 47 97
o Bosea sp. OAE506 ABIE41_RS02435 sigma-70 family RNA polymerase sigma factor insig. 45 95
o Pseudomonas putida KT2440 PP_0994 putative RNA polymerase sigma factor insig. 43 96
o Dechlorosoma suillum PS Dsui_0155 RNA polymerase sigma factor, sigma-70 family strong 46 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS20845 sigma-70 family RNA polymerase sigma factor insig. 45 96
o Pseudomonas stutzeri RCH2 Psest_0114 RNA polymerase sigma factor, sigma-70 family insig. 41 96
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01090 sigma-70 family RNA polymerase sigma factor insig. 46 96
o Burkholderia phytofirmans PsJN BPHYT_RS25560 RNA polymerase sigma factor insig. 43 94
  Caulobacter crescentus NA1000 CCNA_03362 ECF-family RNA polymerase sigma factor strong 45 94
  Caulobacter crescentus NA1000 Δfur CCNA_03362 ECF-family RNA polymerase sigma factor cofit 45 94
  Burkholderia phytofirmans PsJN BPHYT_RS25505 RNA polymerase sigma factor insig. 44 96
  Rhodopseudomonas palustris CGA009 TX73_009325 sigma-70 family RNA polymerase sigma factor insig. 41 96
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3636 RNA polymerase sigma factor, sigma-70 family insig. 41 96
  Xanthobacter sp. DMC5 GFF2972 ECF RNA polymerase sigma factor SigF no data 37 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01786 RNA polymerase sigma-70 factor, ECF subfamily insig. 40 96
  Agrobacterium fabrum C58 Atu2268 ECF family sigma factor insig. 46 79
  Sphingobium sp. HT1-2 GFF5259 hypothetical protein insig. 43 78
  Sinorhizobium meliloti 1021 SM_b20531 RNA polymerase sigma factor insig. 38 93
  Rhizobium sp. OAE497 ABIE40_RS01010 sigma-70 family RNA polymerase sigma factor insig. 37 99
  Azospirillum sp. SherDot2 MPMX19_04570 ECF RNA polymerase sigma factor SigF insig. 36 96
  Erwinia amylovora T8 OLJFJH_08545 RNA polymerase subunit sigma-70 insig. 36 93
  Rhizobium sp. OAE497 ABIE40_RS19610 sigma-70 family RNA polymerase sigma factor insig. 35 98
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09080 sigma-70 family RNA polymerase sigma factor cofit 37 75
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13745 sigma-70 family RNA polymerase sigma factor insig. 34 94
  Pantoea sp. MT58 IAI47_20240 sigma-70 family RNA polymerase sigma factor insig. 33 94
  Rhodanobacter sp. FW510-T8 OKGIIK_03490 hypothetical protein insig. 36 86
  Shewanella amazonensis SB2B Sama_2036 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 31 98
  Rhodanobacter denitrificans MT42 LRK55_RS14380 sigma-70 family RNA polymerase sigma factor insig. 35 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14665 sigma-70 family RNA polymerase sigma factor insig. 35 91
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS13930 RNA polymerase sigma factor insig. 35 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3601.1 RNA polymerase sigma-70 factor insig. 34 92
  Azospirillum brasilense Sp245 AZOBR_RS00810 RNA polymerase sigma factor RpoE insig. 33 86
  Rhodanobacter sp. FW510-T8 OKGIIK_14520 rpoE RNA polymerase sigma factor insig. 29 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12920 RNA polymerase sigma-70 factor cofit 26 89
  Azospirillum brasilense Sp245 AZOBR_RS21190 RNA polymerase sigma factor RpoE insig. 31 67
  Rhodanobacter denitrificans MT42 LRK55_RS09165 RNA polymerase sigma factor insig. 29 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09505 RNA polymerase sigma factor insig. 29 93
  Mycobacterium tuberculosis H37Rv Rv3414c Probable alternative RNA polymerase sigma-D factor SigD sig. 31 92
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03310 RNA polymerase sigma factor insig. 31 86
  Azospirillum sp. SherDot2 MPMX19_02022 ECF RNA polymerase sigma factor RpoE insig. 35 63
  Rhodospirillum rubrum S1H Rru_A0722 Sigma-24 (FecI) (NCBI) insig. 33 83
  Kangiella aquimarina DSM 16071 B158DRAFT_0139 RNA polymerase sigma factor, sigma-70 family insig. 32 96
  Rhodanobacter sp. FW510-T8 OKGIIK_05040 RNA polymerase subunit sigma insig. 30 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05410 RNA polymerase sigma factor strong 29 74
  Sinorhizobium meliloti 1021 SMc01506 RNA polymerase sigma factor strong 30 71
  Dinoroseobacter shibae DFL-12 Dshi_0366 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 28 95
  Paraburkholderia graminis OAS925 ABIE53_003919 RNA polymerase sigma-70 factor (ECF subfamily) insig. 27 90
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 26 72
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24230 RNA polymerase sigma factor strong 30 81
  Shewanella sp. ANA-3 Shewana3_2465 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 25 93
  Pseudomonas sp. BP01 JOY50_RS12975 sigma-70 family RNA polymerase sigma factor insig. 29 92
  Shewanella oneidensis MR-1 SO1986 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 25 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14775 sigma-70 family RNA polymerase sigma factor strong 33 70
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF365 RNA polymerase sigma factor insig. 29 95
  Paraburkholderia graminis OAS925 ABIE53_003943 RNA polymerase sigma-70 factor (ECF subfamily) sig. 32 86
  Pseudomonas fluorescens FW300-N2E3 AO353_07625 RNA polymerase subunit sigma-70 insig. 30 87
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 29 86
  Pseudomonas fluorescens SBW25 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 30 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 30 92
  Xanthobacter sp. DMC5 GFF1406 RNA polymerase sigma-H factor insig. 31 98
  Variovorax sp. SCN45 GFF4558 RNA polymerase ECF-type sigma factor insig. 29 88
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12120 RNA polymerase sigma factor strong 28 75
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01495 sigma-70 family RNA polymerase sigma factor insig. 30 93
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 32 97
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 29 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 29 87
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 27 69
  Sphingobium sp. HT1-2 GFF2317 RNA polymerase ECF-type sigma factor cofit 30 86
  Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 30 71
  Rhodospirillum rubrum S1H Rru_A2537 Sigma-24 (FecI) (NCBI) insig. 30 72
  Marinobacter adhaerens HP15 HP15_p187g100 RNA polymerase sigma factor insig. 28 92
  Phocaeicola dorei CL03T12C01 ABI39_RS04680 RNA polymerase sigma factor insig. 28 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05041 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 86
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 25 90
  Phocaeicola dorei CL03T12C01 ABI39_RS00860 RNA polymerase sigma-70 factor insig. 23 92
  Phocaeicola dorei CL03T12C01 ABI39_RS12815 sigma-70 family RNA polymerase sigma factor insig. 29 74
  Herbaspirillum seropedicae SmR1 HSERO_RS12085 RNA polymerase sigma-E factor protein insig. 26 96
  Rhodanobacter denitrificans MT42 LRK55_RS11045 sigma-70 family RNA polymerase sigma factor cofit 30 69
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11315 sigma-70 family RNA polymerase sigma factor insig. 30 69
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 22 98
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 30 96
  Pseudomonas putida KT2440 PP_3006 RNA polymerase sigma-70 factor, ECF subfamily insig. 29 95
  Bacteroides ovatus ATCC 8483 BACOVA_04312 Sigma-70 region 2 insig. 25 65
  Ralstonia sp. UNC404CL21Col ABZR87_RS03700 RNA polymerase sigma factor insig. 27 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01700 RNA polymerase sigma factor insig. 24 97
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma insig. 31 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16905 sigma-70 family RNA polymerase sigma factor insig. 29 74
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04205 sigma-70 family RNA polymerase sigma factor insig. 29 78
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10060 sigma-70 family RNA polymerase sigma factor insig. 29 88
  Sphingobium sp. HT1-2 GFF5325 RNA polymerase ECF-type sigma factor cofit 28 82
  Bacteroides ovatus ATCC 8483 BACOVA_05165 Sigma-70 region 2 insig. 26 77
  Bacteroides stercoris CC31F HMPREF1181_RS02545 sigma-70 family RNA polymerase sigma factor insig. 31 75
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 30 58
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor insig. 29 80
  Caulobacter crescentus NA1000 CCNA_00685 RNA polymerase sigma factor sig. 27 92
  Caulobacter crescentus NA1000 Δfur CCNA_00685 RNA polymerase sigma factor cofit 27 92
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 31 68
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 30 80
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01235 rpoE RNA polymerase sigma factor RpoE strong 27 93
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4300 RNA polymerase sigma factor, sigma-70 family insig. 26 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16945 RNA polymerase sigma factor sig. 26 89
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 34 76
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05845 sigma-70 family RNA polymerase sigma factor insig. 31 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1381 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 29 72
  Pseudomonas segetis P6 ACVTMO_RS06730 sigma-70 family RNA polymerase sigma factor insig. 28 92
  Alteromonas macleodii MIT1002 MIT1002_01916 RNA polymerase sigma factor CarQ insig. 28 92
  Bacteroides thetaiotaomicron VPI-5482 BT2044 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 24 97
  Paraburkholderia graminis OAS925 ABIE53_004659 RNA polymerase sigma-70 factor (TIGR02943 family) insig. 33 69
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 25 73
  Phaeobacter inhibens DSM 17395 PGA1_c27510 'RNA polymerase sigma factor (sigma-70 family; ECF11 subgroup)' insig. 30 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10915 RNA polymerase subunit sigma strong 29 84
  Rhodanobacter denitrificans MT42 LRK55_RS07240 sigma-70 family RNA polymerase sigma factor insig. 29 80
  Phocaeicola dorei CL03T12C01 ABI39_RS12855 RNA polymerase sigma factor insig. 26 88
  Phocaeicola dorei CL03T12C01 ABI39_RS07815 RNA polymerase sigma factor strong 25 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12805 RNA polymerase sigma factor strong 25 86
  Sphingobium sp. HT1-2 GFF4975 RNA polymerase ECF-type sigma factor cofit 29 95
  Burkholderia phytofirmans PsJN BPHYT_RS08845 RNA polymerase sigma factor insig. 29 90
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 32 78
  Azospirillum sp. SherDot2 MPMX19_05229 ECF RNA polymerase sigma factor RpoE insig. 32 64
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03685 sigma-70 family RNA polymerase sigma factor insig. 29 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 29 71
  Dinoroseobacter shibae DFL-12 Dshi_3835 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 29 84
  Bacteroides thetaiotaomicron VPI-5482 BT3396 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 28 68
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 27 97
  Bacteroides stercoris CC31F HMPREF1181_RS16950 RNA polymerase sigma factor strong 27 74
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13165 RNA polymerase sigma factor insig. 27 77
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 25 95
  Pseudomonas simiae WCS417 PS417_12610 RNA polymerase sigma factor sig. 26 92
  Erwinia tracheiphila SCR3 LU632_RS15425 rpoE RNA polymerase sigma factor RpoE strong 27 93
  Bacteroides stercoris CC31F HMPREF1181_RS02840 RNA polymerase sigma factor sig. 25 72
  Bosea sp. OAE506 ABIE41_RS04095 sigma-70 family RNA polymerase sigma factor strong 29 70
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15190 RNA polymerase sigma-70 factor insig. 25 81
  Rhizobium sp. OAE497 ABIE40_RS18210 sigma-70 family RNA polymerase sigma factor insig. 31 88
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02635 RNA polymerase sigma factor insig. 31 71
  Pseudomonas fluorescens SBW25 PFLU_RS13305 sigma-70 family RNA polymerase sigma factor insig. 27 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13305 sigma-70 family RNA polymerase sigma factor sig. 27 95
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 27 97
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 27 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3853 RNA polymerase sigma factor, sigma-70 family insig. 31 72
  Variovorax sp. SCN45 GFF215 RNA polymerase sigma-54 factor RpoN insig. 29 85
  Bacteroides ovatus ATCC 8483 BACOVA_01909 Sigma-70 region 2 sig. 27 68
  Azospirillum sp. SherDot2 MPMX19_05742 hypothetical protein insig. 37 47
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 27 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11995 RNA polymerase subunit sigma insig. 28 67
  Rhodopseudomonas palustris CGA009 TX73_009355 sigma-70 family RNA polymerase sigma factor insig. 28 72
  Bacteroides thetaiotaomicron VPI-5482 BT3457 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 25 73
  Bacteroides thetaiotaomicron VPI-5482 BT4070 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 25 69
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13620 RNA polymerase subunit sigma insig. 25 82
  Pseudomonas syringae pv. syringae B728a Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 30 83
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 30 83
  Agrobacterium fabrum C58 Atu1485 ECF family sigma factor insig. 30 74
  Pseudomonas fluorescens FW300-N2C3 AO356_16910 RNA polymerase subunit sigma insig. 30 71
  Rhodopseudomonas palustris CGA009 TX73_024905 sigma-70 family RNA polymerase sigma factor insig. 29 97
  Sphingobium sp. HT1-2 GFF4485 RNA polymerase sigma factor cnrH cofit 29 77
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07135 RNA polymerase sigma factor insig. 24 68
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3924 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 23 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14290 sigma-70 family RNA polymerase sigma factor insig. 22 98
  Bosea sp. OAE506 ABIE41_RS11620 sigma-70 family RNA polymerase sigma factor insig. 26 95
  Bacteroides thetaiotaomicron VPI-5482 BT4347 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 25 78
  Magnetospirillum magneticum AMB-1 AMB_RS09285 RNA polymerase sigma factor no data 31 68
  Sphingobium sp. HT1-2 GFF1466 RNA polymerase sigma-54 factor RpoN insig. 31 78
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18950 sigma-70 family RNA polymerase sigma factor insig. 31 77
  Castellaniella sp019104865 MT123 ABCV34_RS09955 sigma-70 family RNA polymerase sigma factor insig. 28 93
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0766 RNA polymerase sigma factor, sigma-70 family insig. 28 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16675 hypothetical protein insig. 28 68
  Bacteroides ovatus ATCC 8483 BACOVA_01848 Sigma-70 region 2 strong 26 73
  Bacteroides ovatus ATCC 8483 BACOVA_03979 Sigma-70 region 2 strong 26 65
  Cellulophaga baltica 18 M666_RS01580 sigma-70 family RNA polymerase sigma factor insig. 26 67
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 25 96
  Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 25 96
  Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 25 96
  Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 25 96
  Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 24 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15905 RNA polymerase sigma factor cofit 23 92
  Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 31 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09110 RNA polymerase sigma-70 factor sig. 30 72
  Enterobacter asburiae PDN3 EX28DRAFT_0072 RNA polymerase sigma factor RpoE no data 26 93
  Enterobacter sp. TBS_079 MPMX20_03444 ECF RNA polymerase sigma-E factor no data 26 93
  Phocaeicola dorei CL03T12C01 ABI39_RS17450 RNA polymerase sigma factor strong 26 73
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03770 RNA polymerase sigma factor strong 26 73
  Rhodopseudomonas palustris CGA009 TX73_021900 sigma-70 family RNA polymerase sigma factor strong 31 72
  Caulobacter crescentus NA1000 CCNA_03589 RNA polymerase EcfG family sigma factor sigT strong 30 70
  Caulobacter crescentus NA1000 Δfur CCNA_03589 RNA polymerase EcfG family sigma factor sigT cofit 30 70
  Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 29 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 29 71
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 28 71
  Dickeya dianthicola 67-19 HGI48_RS15850 RNA polymerase sigma factor RpoE cofit 26 93
  Dickeya dianthicola ME23 DZA65_RS16930 RNA polymerase sigma factor RpoE strong 26 93
  Bacteroides thetaiotaomicron VPI-5482 BT2569 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 24 73
  Bacteroides ovatus ATCC 8483 BACOVA_05174 RNA polymerase sigma-70 factor insig. 24 90
  Rhodanobacter sp. FW510-T8 OKGIIK_12575 rpoE RNA polymerase subunit sigma-24 insig. 28 86
  Dinoroseobacter shibae DFL-12 Dshi_3423 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 27 88
  Pseudomonas syringae pv. syringae B728a Psyr_0362 Sigma-70 region 2 insig. 27 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0362 Sigma-70 region 2 insig. 27 92
  Pseudomonas aeruginosa MRSN321 DY961_RS28585 sigma-70 family RNA polymerase sigma factor insig. 26 89
  Pseudomonas aeruginosa PA14 IKLFDK_09340 RNA polymerase subunit sigma no data 26 89
  Pseudomonas aeruginosa PUPa3 DQ20_RS38070 sigma-70 family RNA polymerase sigma factor no data 26 89
  Bacteroides ovatus ATCC 8483 BACOVA_02205 Sigma-70 region 2 sig. 24 73
  Rhizobium sp. OAE497 ABIE40_RS27415 sigma-70 family RNA polymerase sigma factor insig. 24 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 23 92
  Bacteroides thetaiotaomicron VPI-5482 BT1572 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 23 63
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04025 RNA polymerase sigma factor insig. 23 72
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15190 RNA polymerase sigma factor insig. 23 98
  Azospirillum sp. SherDot2 MPMX19_01371 hypothetical protein insig. 29 83
  Bosea sp. OAE506 ABIE41_RS10280 sigma-70 family RNA polymerase sigma factor insig. 27 87
  Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 27 94
  Cupriavidus basilensis FW507-4G11 RR42_RS35625 RNA polymerase sigma24 factor insig. 26 89
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 26 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1974 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 26 70
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3492 RNA polymerase sigma factor, sigma-70 family strong 30 76
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 24 97
  Phocaeicola dorei CL03T12C01 ABI39_RS09920 sigma-70 family RNA polymerase sigma factor insig. 21 98
  Xanthobacter sp. DMC5 GFF2321 ECF RNA polymerase sigma factor EcfG no data 31 79
  Paraburkholderia graminis OAS925 ABIE53_002003 RNA polymerase sigma factor (sigma-70 family) sig. 28 73
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04435 RNA polymerase sigma factor insig. 20 96
  Marinobacter adhaerens HP15 HP15_270 RNA polymerase, sigma-24 subunit, ECF subfamily cofit 24 93
  Pseudomonas orientalis W4I3 QF045_RS00535 sigma-70 family RNA polymerase sigma factor cofit 28 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 27 96
  Xanthobacter sp. DMC5 GFF3078 ECF RNA polymerase sigma factor RpoE insig. 36 46
  Mycobacterium tuberculosis H37Rv Rv0735 Probable alternative RNA polymerase sigma factor SigL insig. 31 79
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0584 RNA polymerase sigma factor, sigma-70 family insig. 25 76
  Cellulophaga baltica 18 M666_RS10480 RNA polymerase sigma factor sig. 28 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02135 putative RNA polymerase sigma factor FecI cofit 27 71
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2107 RNA polymerase sigma factor RpoE no data 26 93
  Marinobacter adhaerens HP15 HP15_950 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 25 93
  Dechlorosoma suillum PS Dsui_0961 RNA polymerase sigma factor, SigZ family insig. 32 63
  Pseudomonas segetis P6 ACVTMO_RS10610 RNA polymerase sigma factor insig. 28 98
  Pseudomonas orientalis W4I3 QF045_RS17270 sigma-70 family RNA polymerase sigma factor insig. 27 92
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10600 RNA polymerase subunit sigma-24 strong 26 73
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3681.1 RNA polymerase sigma factor RpoE insig. 26 99
  Dickeya dadantii 3937 DDA3937_RS15765 RNA polymerase sigma factor RpoE strong 25 93
  Phocaeicola dorei CL03T12C01 ABI39_RS18115 RNA polymerase sigma-70 factor insig. 22 96
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 30 71
  Acidovorax sp. GW101-3H11 Ac3H11_1622 RNA polymerase sigma factor insig. 28 72
  Escherichia fergusonii Becca EFB2_01323 ECF RNA polymerase sigma-E factor no data 26 93
  Escherichia coli ECRC101 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE no data 26 93
  Escherichia coli ECRC102 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE no data 26 93
  Escherichia coli ECRC62 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE no data 26 93
  Escherichia coli ECRC98 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE no data 26 93
  Escherichia coli ECRC99 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE no data 26 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01134 ECF RNA polymerase sigma-E factor no data 26 93
  Escherichia coli Nissle 1917 ECOLIN_RS14560 RNA polymerase sigma factor RpoE no data 26 93
  Escherichia coli BW25113 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) no data 26 93
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14740 RNA polymerase sigma factor RpoE no data 26 93
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 25 67
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4578 RNA polymerase sigma factor, sigma-70 family insig. 22 74