| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_17960 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Shewanella amazonensis SB2B | Sama_0274 | | LysR family transcriptional regulator (RefSeq) | insig. | 49 | 99 |
| o | Alteromonas macleodii MIT1002 | MIT1002_03452 | | HTH-type transcriptional activator CmpR | insig. | 38 | 97 |
| o | Shewanella sp. ANA-3 | Shewana3_3293 | | LysR family transcriptional regulator (RefSeq) | insig. | 44 | 94 |
| o | Shewanella oneidensis MR-1 | SO0997 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 44 | 94 |
| o | Shewanella loihica PV-4 | Shew_3655 | | LysR family transcriptional regulator (RefSeq) | insig. | 42 | 98 |
| o | Marinobacter adhaerens HP15 | HP15_984 | | transcriptional regulator, LysR family protein | insig. | 43 | 98 |
| | Shewanella sp. ANA-3 | Shewana3_2430 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 94 |
| | Pantoea sp. MT58 | IAI47_19115 | | LysR family transcriptional regulator | insig. | 24 | 98 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1204 | | Transcriptional regulator | strong | 34 | 55 |
| | Shewanella sp. ANA-3 | Shewana3_1691 | | LysR family transcriptional regulator (RefSeq) | insig. | 28 | 92 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS19355 | | DNA-binding transcriptional regulator OxyR | strong | 28 | 81 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32260 | | LysR substrate-binding domain-containing protein | insig. | 30 | 59 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1211 | | Hydrogen peroxide-inducible genes activator | sig. | 26 | 82 |
| | Pseudomonas protegens RBAN4 | FABNJH_12000 | ynfL | HTH-type transcriptional regulator YnfL | insig. | 33 | 57 |
| | Azospirillum sp. SherDot2 | MPMX19_03927 | | HTH-type transcriptional activator CmpR | insig. | 30 | 93 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF785 | | Transcriptional regulator ligR, LysR family | insig. | 28 | 93 |
| | Shewanella oneidensis MR-1 | SO1916 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 28 | 92 |
| | Pseudomonas stutzeri RCH2 | Psest_0432 | | Transcriptional regulator | insig. | 29 | 83 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS31330 | | LysR family transcriptional regulator | insig. | 26 | 95 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_00440 | | LysR family transcriptional regulator | insig. | 29 | 83 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS12880 | | LysR substrate-binding domain-containing protein | sig. | 32 | 54 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20605 | | LysR family transcriptional regulator | insig. | 32 | 54 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS48210 | | LysR substrate-binding domain-containing protein | insig. | 32 | 54 |
| | Agrobacterium fabrum C58 | Atu4641 | | LysR family transcriptional regulator | sig. | 26 | 95 |
| | Cellulophaga baltica 18 | M666_RS12060 | | LysR substrate-binding domain-containing protein | sig. | 30 | 58 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28030 | | hypothetical protein | insig. | 29 | 79 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0203 | | Transcriptional regulator | insig. | 28 | 88 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_5141 | | Hydrogen peroxide-inducible genes activator | insig. | 25 | 81 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_05925 | | LysR family transcriptional regulator | insig. | 23 | 93 |
| | Acinetobacter baumannii LAC-4 | RR41_RS16950 | | DNA-binding transcriptional regulator HcaR | insig. | 32 | 55 |
| | Dickeya dadantii 3937 | DDA3937_RS03225 | | LysR family transcriptional regulator | insig. | 31 | 60 |
| | Dickeya dianthicola ME23 | DZA65_RS03420 | | LysR family transcriptional regulator | insig. | 30 | 56 |
| | Dickeya dianthicola 67-19 | HGI48_RS03375 | | LysR family transcriptional regulator | insig. | 30 | 60 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4337 | | Transcriptional regulator | insig. | 34 | 54 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20435 | | LysR family transcriptional regulator | insig. | 28 | 91 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS11120 | | LysR family transcriptional regulator | insig. | 26 | 91 |
| | Acinetobacter radioresistens SK82 | MPMX26_01690 | | HTH-type transcriptional regulator BenM | cofit | 30 | 80 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11960 | | LysR family transcriptional regulator | insig. | 29 | 82 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27380 | | LysR family transcriptional regulator | insig. | 29 | 82 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50155 | | LysR family transcriptional regulator | sig. | 29 | 82 |
| | Acinetobacter radioresistens SK82 | MPMX26_00326 | | Hca operon transcriptional activator HcaR | cofit | 31 | 55 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17420 | | transcriptional regulator LysR family | insig. | 28 | 80 |
| | Bosea sp. OAE506 | ABIE41_RS23080 | | LysR substrate-binding domain-containing protein | insig. | 28 | 57 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_07825 | | LysR family transcriptional regulator | insig. | 26 | 82 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS01315 | | LysR family transcriptional regulator | sig. | 26 | 82 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_15885 | | LysR family transcriptional regulator | sig. | 26 | 82 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34240 | | LysR family transcriptional regulator | sig. | 26 | 82 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3449 | | Hydrogen peroxide-inducible genes activator | insig. | 26 | 82 |
| | Pseudomonas simiae WCS417 | PS417_23640 | | LysR family transcriptional regulator | insig. | 24 | 85 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS04545 | | LysR substrate-binding domain-containing protein | insig. | 28 | 81 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS04765 | | LysR substrate-binding domain-containing protein | strong | 28 | 81 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS08345 | | LysR family transcriptional regulator | insig. | 27 | 91 |
| | Pseudomonas stutzeri RCH2 | Psest_2592 | | Transcriptional regulator | insig. | 26 | 91 |
| | Shewanella loihica PV-4 | Shew_1440 | | LysR family transcriptional regulator (RefSeq) | no data | 31 | 58 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_10505 | | LysR family transcriptional regulator | insig. | 31 | 54 |
| | Caulobacter crescentus NA1000 | CCNA_03811 | | LysR-family transcriptional regulator | strong | 28 | 81 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03811 | | LysR-family transcriptional regulator | no data | 28 | 81 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08630 | | LysR family transcriptional regulator | cofit | 28 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS19770 | | LysR family transcriptional regulator | insig. | 26 | 93 |
| | Pseudomonas protegens RBAN4 | FABNJH_10765 | cmpR | HTH-type transcriptional activator CmpR | insig. | 25 | 81 |
| | Pseudomonas sp. SVBP6 | COO64_RS01985 | | LysR family transcriptional regulator | insig. | 30 | 80 |
| | Sinorhizobium meliloti 1021 | SMc00820 | | transcriptional regulator | sig. | 28 | 55 |
| | Pantoea sp. MT58 | IAI47_05470 | | LysR family transcriptional regulator | insig. | 26 | 98 |
| | Pseudomonas sp. RS175 | PFR28_00022 | | HTH-type transcriptional regulator CysL | insig. | 25 | 81 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04878 | | HTH-type transcriptional regulator CysL | insig. | 25 | 83 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28580 | | LysR family transcriptional regulator | insig. | 26 | 91 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS22265 | | transcriptional regulator | strong | 25 | 79 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS05765 | | LysR family transcriptional regulator | cofit | 30 | 55 |
| | Dickeya dadantii 3937 | DDA3937_RS05335 | | LysR family transcriptional regulator | insig. | 27 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS02605 | | LysR family transcriptional regulator | insig. | 33 | 50 |
| | Pseudomonas orientalis W4I3 | QF045_RS10015 | | transcriptional regulator CynR | insig. | 30 | 54 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS17870 | | LysR family transcriptional regulator | strong | 29 | 82 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS18015 | | LysR family transcriptional regulator | strong | 29 | 82 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_07285 | lysR | LysR family transcriptional regulator | strong | 27 | 82 |
| | Agrobacterium fabrum C58 | Atu0654 | | transcriptional regulator, LysR family | strong | 27 | 57 |
| | Enterobacter sp. TBS_079 | MPMX20_03302 | | HTH-type transcriptional regulator CynR | insig. | 27 | 91 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01995 | lysR | DNA-binding transcriptional regulator OxyR | insig. | 26 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS27430 | | LysR family transcriptional regulator | insig. | 28 | 83 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3156 | | transcriptional regulator, LysR family | insig. | 24 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3156 | | transcriptional regulator, LysR family | sig. | 24 | 97 |
| | Pseudomonas sp. DMC3 | GFF4928 | | HTH-type transcriptional regulator CysL | insig. | 24 | 91 |
| | Shewanella loihica PV-4 | Shew_3562 | | LysR family transcriptional regulator (RefSeq) | insig. | 31 | 55 |
| | Serratia liquefaciens MT49 | IAI46_11680 | | LysR family transcriptional regulator | insig. | 27 | 91 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS17035 | | LysR family transcriptional regulator | insig. | 28 | 55 |
| | Variovorax sp. SCN45 | GFF6015 | | Transcriptional regulator PA0877, LysR family | insig. | 26 | 97 |
| | Escherichia coli ECRC100 | OKFHMN_22230 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 26 | 91 |
| | Escherichia coli ECRC101 | MCAODC_12760 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 26 | 91 |
| | Escherichia coli ECRC98 | JDDGAC_26180 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 26 | 91 |
| | Escherichia coli ECRC99 | KEDOAH_05990 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | no data | 26 | 91 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF17 | | LysR family transcriptional regulator YfeR | insig. | 32 | 55 |
| | Sinorhizobium meliloti 1021 | SM_b21535 | | LysR family transcriptional regulator | insig. | 29 | 56 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS03575 | | LysR substrate-binding domain-containing protein | insig. | 27 | 77 |
| | Escherichia coli BL21 | ECD_02308 | | transcriptional regulator of yefH | insig. | 25 | 91 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01315 | | HTH-type transcriptional regulator CynR | insig. | 25 | 91 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_16 | | Cys regulon transcriptional activator CysB | insig. | 25 | 81 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1982 | | transcriptional regulator, LysR family | insig. | 25 | 81 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1982 | | transcriptional regulator, LysR family | insig. | 25 | 81 |
| | Rhodopseudomonas palustris CGA009 | TX73_013870 | | LysR substrate-binding domain-containing protein | insig. | 29 | 55 |
| | Variovorax sp. OAS795 | ABID97_RS26290 | | LysR substrate-binding domain-containing protein | insig. | 29 | 91 |
| | Pseudomonas sp. RS175 | PFR28_01830 | | HTH-type transcriptional regulator CynR | insig. | 27 | 90 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19620 | | LysR family transcriptional regulator | insig. | 26 | 80 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS13840 | | LysR family transcriptional regulator | no data | 25 | 91 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS00200 | | LysR family transcriptional regulator | insig. | 30 | 46 |
| | Escherichia fergusonii Becca | EFB2_01468 | | HTH-type transcriptional regulator CynR | insig. | 25 | 91 |
| | Escherichia coli ECOR27 | NOLOHH_13910 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 25 | 91 |
| | Escherichia coli ECRC62 | BNILDI_12775 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 25 | 91 |
| | Escherichia coli BW25113 | b2409 | yfeR | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 25 | 91 |
| | Acinetobacter radioresistens SK82 | MPMX26_03182 | | HTH-type transcriptional regulator CysL | cofit | 26 | 82 |
| | Pseudomonas putida KT2440 | PP_1984 | | Transcriptional regulator, LysR family | strong | 26 | 81 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25465 | pycR;inference=COORDINATES | LysR family transcriptional regulator PycR | strong | 25 | 80 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS57915 | pycR;inference=COORDINATES | LysR family transcriptional regulator PycR | strong | 25 | 80 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26240 | | LysR family transcriptional regulator PycR | strong | 25 | 80 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS15060 | | LysR family transcriptional regulator | insig. | 28 | 55 |
| | Rhizobium sp. OAE497 | ABIE40_RS08085 | | LysR family transcriptional regulator | insig. | 27 | 93 |
| | Pseudomonas sp. BP01 | JOY50_RS16635 | | LysR family transcriptional regulator | insig. | 25 | 81 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS00720 | | LysR family transcriptional regulator | insig. | 29 | 48 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS05255 | | LysR substrate-binding domain-containing protein | insig. | 28 | 81 |
| | Pseudomonas putida KT2440 | PP_4525 | | Transcriptional regulator, LysR family | insig. | 23 | 90 |
| | Rahnella sp. WP5 | EX31_RS17470 | | nitrogen assimilation transcriptional regulator | insig. | 27 | 90 |
| | Pseudomonas sp. S08-1 | OH686_04485 | | Transcriptional regulator, LysR family | cofit | 26 | 81 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS13490 | | LysR family transcriptional regulator | insig. | 29 | 97 |
| | Rhizobium sp. OAE497 | ABIE40_RS14205 | | LysR family transcriptional regulator | insig. | 27 | 98 |
| | Rhizobium sp. OAE497 | ABIE40_RS03500 | | LysR substrate-binding domain-containing protein | strong | 27 | 57 |
| | Pseudomonas sp. SVBP6 | COO64_RS05670 | | LysR family transcriptional regulator | insig. | 24 | 81 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31790 | | LysR family transcriptional regulator | insig. | 29 | 47 |
| | Pseudomonas putida KT2440 | PP_4627 | | transcriptional regulator, LysR family | sig. | 25 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04052 | | HTH-type transcriptional regulator CynR | cofit | 28 | 79 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_17840 | | transcriptional regulator | insig. | 27 | 78 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14925 | | LysR family transcriptional regulator | insig. | 31 | 63 |
| | Ralstonia solanacearum UW163 | UW163_RS12395 | | LysR family transcriptional regulator | no data | 31 | 63 |
| | Agrobacterium fabrum C58 | Atu4021 | | LysR family transcriptional regulator | insig. | 30 | 55 |
| | Pseudomonas segetis P6 | ACVTMO_RS15235 | | LysR family transcriptional regulator | insig. | 26 | 81 |
| | Ralstonia solanacearum GMI1000 | RS_RS05740 | | LysR family transcriptional regulator | insig. | 31 | 63 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23755 | | transcriptional regulator | insig. | 31 | 58 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS15105 | | LysR family transcriptional regulator | insig. | 31 | 58 |
| | Erwinia amylovora T8 | OLJFJH_05375 | | transcriptional regulator | insig. | 30 | 55 |
| | Klebsiella michiganensis M5al | BWI76_RS16740 | | transcriptional regulator | sig. | 28 | 56 |
| | Variovorax sp. SCN45 | GFF3844 | | Transcriptional regulator, LysR family | insig. | 28 | 49 |
| | Pseudomonas protegens RBAN4 | FABNJH_07785 | cynR | transcriptional regulator CynR | insig. | 27 | 84 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_09945 | | LysR family transcriptional regulator | strong | 26 | 91 |
| | Pseudomonas sp. BP01 | JOY50_RS01200 | | putrescine utilization regulator PtrR | insig. | 24 | 90 |
| | Variovorax sp. SCN45 | GFF3056 | | Nitrogen assimilation regulatory protein Nac | insig. | 26 | 80 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10625 | | LysR family transcriptional regulator | no data | 26 | 80 |
| | Klebsiella michiganensis M5al | BWI76_RS20610 | | LysR family transcriptional regulator | insig. | 25 | 91 |
| | Pseudomonas orientalis W4I3 | QF045_RS20745 | | LysR family transcriptional regulator | cofit | 24 | 81 |
| | Variovorax sp. OAS795 | ABID97_RS07930 | | LysR family transcriptional regulator | insig. | 24 | 91 |
| | Variovorax sp. OAS795 | ABID97_RS24430 | | LysR family transcriptional regulator | insig. | 31 | 56 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11135 | | LysR family transcriptional regulator | no data | 30 | 47 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01292 | | transcriptional regulator, LysR family | no data | 30 | 58 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS16320 | | transcriptional regulator | insig. | 29 | 79 |
| | Paraburkholderia graminis OAS925 | ABIE53_002275 | | aminoethylphosphonate catabolism LysR family transcriptional regulator | insig. | 29 | 56 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22550 | | LysR family transcriptional regulator | insig. | 29 | 57 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1212.1 | | transcriptional regulator | insig. | 28 | 91 |
| | Azospirillum sp. SherDot2 | MPMX19_04990 | | Hydrogen peroxide-inducible genes activator | insig. | 27 | 79 |
| | Acinetobacter baumannii LAC-4 | RR41_RS05140 | | LysR family transcriptional regulator | insig. | 27 | 89 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2026 | | Transcriptional regulator | strong | 26 | 91 |
| | Azospirillum sp. SherDot2 | MPMX19_02320 | | HTH-type transcriptional regulator GltR | insig. | 24 | 84 |
| | Rahnella sp. WP5 | EX31_RS12125 | | LysR family transcriptional regulator | insig. | 25 | 81 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11315 | | LysR family transcriptional regulator | insig. | 30 | 55 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01089 | | transcriptional regulator, LysR family | no data | 28 | 82 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS11345 | | LysR family transcriptional regulator | insig. | 28 | 82 |
| | Pseudomonas simiae WCS417 | PS417_23460 | | LysR family transcriptional regulator | insig. | 27 | 55 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03727 | | HTH-type transcriptional regulator CysL | cofit | 27 | 57 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03335 | | transcriptional regulator, LysR family | insig. | 27 | 80 |
| | Pseudomonas simiae WCS417 | PS417_18605 | | LysR family transcriptional regulator | insig. | 24 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32870 | | LysR family transcriptional regulator | insig. | 30 | 55 |
| | Pseudomonas orientalis W4I3 | QF045_RS18800 | | LysR substrate-binding domain-containing protein | insig. | 27 | 57 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19340 | | LysR family transcriptional regulator | insig. | 25 | 86 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS07735 | nac | nitrogen assimilation transcriptional regulator NAC | cofit | 25 | 83 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS25450 | | LysR family transcriptional regulator | insig. | 24 | 82 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS25450 | | LysR family transcriptional regulator | insig. | 24 | 82 |
| | Dechlorosoma suillum PS | Dsui_3396 | | transcriptional regulator | insig. | 30 | 53 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS20585 | | LysR family transcriptional regulator | cofit | 24 | 81 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS20585 | | LysR family transcriptional regulator | sig. | 24 | 81 |
| | Klebsiella michiganensis M5al | BWI76_RS04365 | | LysR family transcriptional regulator | insig. | 27 | 61 |
| | Rahnella sp. WP5 | EX31_RS04240 | | LysR family transcriptional regulator | insig. | 26 | 80 |
| | Erwinia amylovora T8 | OLJFJH_10895 | | LysR family transcriptional regulator | insig. | 24 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS15725 | | LysR family transcriptional regulator | insig. | 29 | 73 |
| | Pectobacterium carotovorum WPP14 | HER17_RS18045 | | LysR family transcriptional regulator | cofit | 28 | 80 |
| | Pseudomonas protegens RBAN4 | FABNJH_20500 | cysL | HTH-type transcriptional regulator CysL | insig. | 28 | 57 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3960 | | Phosphonate uptake and metabolism regulator, LysR-family | no data | 28 | 57 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09455 | | LysR family transcriptional regulator | insig. | 28 | 80 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02999 | | HTH-type transcriptional regulator BenM | cofit | 28 | 80 |
| | Xanthobacter sp. DMC5 | GFF1272 | | HTH-type transcriptional regulator YofA | insig. | 28 | 49 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS18875 | | LysR family transcriptional regulator | insig. | 27 | 50 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04990 | | LysR family transcriptional regulator | insig. | 27 | 50 |
| | Pseudomonas simiae WCS417 | PS417_23675 | | transcriptional regulator | strong | 27 | 80 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS11950 | | LysR family transcriptional regulator | cofit | 27 | 51 |
| | Pseudomonas orientalis W4I3 | QF045_RS02485 | | LysR substrate-binding domain-containing protein | cofit | 26 | 91 |
| | Pseudomonas simiae WCS417 | PS417_17140 | | LysR family transcriptional regulator | insig. | 26 | 57 |
| | Pseudomonas sp. SVBP6 | COO64_RS02765 | | LysR substrate-binding domain-containing protein | insig. | 25 | 83 |
| | Pseudomonas sp. RS175 | PFR28_02825 | | HTH-type transcriptional activator CmpR | insig. | 25 | 81 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3802 | | transcriptional regulator, LysR family (RefSeq) | insig. | 24 | 96 |
| | Pseudomonas sp. DMC3 | GFF784 | | HTH-type transcriptional activator CmpR | insig. | 24 | 86 |
| | Variovorax sp. OAS795 | ABID97_RS12840 | | LysR family transcriptional regulator | no data | 24 | 55 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3949 | | Cys regulon transcriptional activator CysB | insig. | 24 | 81 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_20615 | | LysR family transcriptional regulator | strong | 24 | 81 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0727 | | transcriptional regulator, LysR family (RefSeq) | insig. | 32 | 55 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_28450 | | LysR family transcriptional regulator | insig. | 32 | 54 |
| | Acinetobacter baumannii LAC-4 | RR41_RS00145 | | LysR family transcriptional regulator | insig. | 27 | 81 |
| | Pseudomonas sp. BP01 | JOY50_RS03685 | cynR | transcriptional regulator CynR | insig. | 30 | 55 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39470 | | LysR family transcriptional regulator | insig. | 30 | 58 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12330 | | LysR family transcriptional regulator | sig. | 27 | 80 |
| | Pseudomonas sp. BP01 | JOY50_RS15585 | | LysR family transcriptional regulator | insig. | 27 | 58 |
| | Ralstonia solanacearum GMI1000 | RS_RS23255 | | LysR family transcriptional regulator | insig. | 25 | 95 |
| | Shewanella sp. ANA-3 | Shewana3_3435 | | LysR family transcriptional regulator (RefSeq) | insig. | 30 | 55 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2713 | | transcriptional regulator, LysR family | insig. | 28 | 80 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2713 | | transcriptional regulator, LysR family | insig. | 28 | 80 |
| | Pseudomonas protegens RBAN4 | FABNJH_11105 | lysR | LysR family transcriptional regulator | insig. | 28 | 57 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_743 | | Transcriptional regulator | strong | 26 | 91 |
| | Pantoea sp. MT58 | IAI47_07570 | | nitrogen assimilation transcriptional regulator NAC | sig. | 25 | 82 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10585 | | LysR family transcriptional regulator | insig. | 33 | 62 |
| | Pseudomonas sp. BP01 | JOY50_RS12660 | | LysR substrate-binding domain-containing protein | insig. | 29 | 57 |
| | Paraburkholderia graminis OAS925 | ABIE53_002238 | | DNA-binding transcriptional LysR family regulator | sig. | 28 | 82 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS10965 | | LysR family transcriptional regulator | insig. | 27 | 80 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28390 | | LysR family transcriptional regulator | sig. | 27 | 80 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS51110 | | LysR family transcriptional regulator | insig. | 27 | 80 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0767 | | transcriptional regulator, LysR family | insig. | 27 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0767 | | transcriptional regulator, LysR family | insig. | 27 | 100 |
| | Pseudomonas sp. RS175 | PFR28_02549 | | HTH-type transcriptional regulator CysL | insig. | 26 | 82 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_13340 | | DNA-binding transcriptional regulator OxyR | cofit | 25 | 96 |
| | Dickeya dianthicola ME23 | DZA65_RS07765 | | hypochlorite stress DNA-binding transcriptional regulator HypT | insig. | 25 | 92 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18490 | | LysR family transcriptional regulator | insig. | 31 | 47 |
| | Methanococcus maripaludis S2 | MMP_RS08815 | | LysR family transcriptional regulator | no data | 30 | 55 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4886 | | LysR family transcriptional regulator STM3121 | insig. | 30 | 83 |
| | Pseudomonas simiae WCS417 | PS417_07355 | | transcriptional regulator | insig. | 29 | 52 |
| | Pectobacterium carotovorum WPP14 | HER17_RS19795 | | LysR family transcriptional regulator | insig. | 29 | 63 |
| | Dechlorosoma suillum PS | Dsui_0823 | | transcriptional regulator | cofit | 29 | 80 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS17245 | | LysR substrate-binding domain-containing protein | insig. | 29 | 83 |
| | Rhizobium sp. OAE497 | ABIE40_RS16120 | | LysR substrate-binding domain-containing protein | no data | 26 | 55 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS14490 | | LysR substrate-binding domain-containing protein | insig. | 25 | 80 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21395 | | LysR family transcriptional regulator | sig. | 25 | 81 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4928 | | LysR family transcriptional regulator STM3121 | insig. | 30 | 80 |
| | Shewanella oneidensis MR-1 | SO0843 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 30 | 55 |
| | Pseudomonas orientalis W4I3 | QF045_RS25930 | | LysR family transcriptional regulator | insig. | 30 | 80 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2469 | | Transcriptional regulator, LysR family | sig. | 27 | 57 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04885 | | HTH-type transcriptional regulator BenM | insig. | 27 | 80 |
| | Lysobacter sp. OAE881 | ABIE51_RS05475 | | LysR substrate-binding domain-containing protein | insig. | 27 | 81 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2038 | | LysR family transcriptional regulator YfeR | insig. | 27 | 55 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS19070 | | LysR family transcriptional regulator | insig. | 26 | 57 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS19070 | | LysR family transcriptional regulator | insig. | 26 | 57 |
| | Dickeya dianthicola 67-19 | HGI48_RS07255 | | hypochlorite stress DNA-binding transcriptional regulator HypT | insig. | 25 | 92 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23525 | | LysR family transcriptional regulator | insig. | 25 | 58 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05280 | | LysR family transcriptional regulator | insig. | 25 | 83 |
| | Pseudomonas protegens RBAN4 | FABNJH_03960 | lysR | Transcriptional regulator, LysR family | insig. | 25 | 82 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00091 | | HTH-type transcriptional regulator YjiE | strong | 26 | 91 |
| | Escherichia fergusonii Becca | EFB2_04525 | | Hydrogen peroxide-inducible genes activator | insig. | 25 | 58 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33910 | | LysR family transcriptional regulator | insig. | 24 | 88 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS28745 | | LysR family transcriptional regulator | cofit | 26 | 79 |