Homologs of CSW01_00850 from Vibrio cholerae E7946 ATCC 55056

multidrug resistance protein
SEED: RND multidrug efflux transporter; Acriflavin resistance protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_00850 multidrug resistance protein cofit 100 100
o Shewanella sp. ANA-3 Shewana3_0371 acriflavin resistance protein (RefSeq) insig. 71 98
o Shewanella amazonensis SB2B Sama_3269 putative multidrug resistance protein (RefSeq) strong 71 98
o Rhodospirillum rubrum S1H Rru_A3699 Acriflavin resistance protein (NCBI) strong 51 97
o Azospirillum brasilense Sp245 AZOBR_RS31320 acriflavine resistance protein B strong 50 99
o Magnetospirillum magneticum AMB-1 AMB_RS17260 acriflavine resistance protein B cofit 51 97
o Rhodopseudomonas palustris CGA009 TX73_019545 MexW/MexI family multidrug efflux RND transporter permease subunit cofit 51 97
o Azospirillum sp. SherDot2 MPMX19_05610 Efflux pump membrane transporter BepE insig. 51 97
o Pseudomonas simiae WCS417 PS417_22755 acriflavine resistance protein B insig. 49 97
o Pseudomonas fluorescens SBW25 PFLU_RS24405 multidrug efflux RND transporter permease subunit insig. 48 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24405 multidrug efflux RND transporter permease subunit insig. 48 97
o Pseudomonas sp. RS175 PFR28_03330 Multidrug efflux pump subunit AcrB insig. 49 97
o Pseudomonas fluorescens FW300-N2C3 AO356_18440 acriflavine resistance protein B sig. 49 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5614 RND multidrug efflux transporter; Acriflavin resistance protein insig. 48 97
o Pseudomonas sp. S08-1 OH686_17360 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) strong 48 97
o Pseudomonas sp. BP01 JOY50_RS14955 multidrug efflux RND transporter permease subunit insig. 49 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_720 RND multidrug efflux transporter; Acriflavin resistance protein insig. 49 97
o Pseudomonas putida KT2440 PP_0906 putative Multidrug efflux RND transporter insig. 49 97
o Pseudomonas sp. SVBP6 COO64_RS12055 multidrug efflux RND transporter permease subunit insig. 49 97
o Pseudomonas fluorescens FW300-N2E3 AO353_04000 acriflavine resistance protein B insig. 48 97
o Pseudomonas aeruginosa PA14 IKLFDK_02225 multidrug efflux RND transporter permease subunit MexW insig. 49 97
o Pseudomonas sp. DMC3 GFF5069 Multidrug efflux pump subunit AcrB cofit 48 97
o Marinobacter adhaerens HP15 HP15_3262 multidrug resistance protein strong 48 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1217 RND multidrug efflux transporter; Acriflavin resistance protein cofit 46 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1771 RND multidrug efflux transporter; Acriflavin resistance protein insig. 48 97
  Pseudomonas putida KT2440 PP_2065 Multidrug efflux RND transporter insig. 47 97
  Pseudomonas sp. BP01 JOY50_RS22265 MexW/MexI family multidrug efflux RND transporter permease subunit insig. 47 97
o Pseudomonas stutzeri RCH2 Psest_1153 Cation/multidrug efflux pump strong 48 97
  Pseudomonas aeruginosa PA14 IKLFDK_21660 multidrug efflux RND transporter permease MexI insig. 46 97
o Variovorax sp. SCN45 GFF3509 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system insig. 47 99
  Variovorax sp. SCN45 GFF266 RND efflux system, inner membrane transporter insig. 48 97
  Shewanella oneidensis MR-1 SO4327.1 hypothetical multidrug resistance protein (NCBI ptt file) strong 70 60
  Pseudomonas sp. SVBP6 COO64_RS10725 MexW/MexI family multidrug efflux RND transporter permease subunit insig. 46 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS26025 efflux RND transporter permease subunit insig. 47 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS42075 efflux RND transporter permease subunit insig. 46 97
o Burkholderia phytofirmans PsJN BPHYT_RS29560 acriflavine resistance protein B insig. 47 97
  Pseudomonas fluorescens SBW25 PFLU_RS24395 multidrug efflux RND transporter permease subunit insig. 46 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24395 multidrug efflux RND transporter permease subunit insig. 46 97
o Xanthobacter sp. DMC5 GFF2738 Efflux pump membrane transporter BepE insig. 45 97
  Azospirillum sp. SherDot2 MPMX19_04343 Efflux pump membrane transporter BepE insig. 41 98
  Azospirillum brasilense Sp245 AZOBR_RS22130 acriflavin resistance protein insig. 41 98
  Pseudomonas sp. S08-1 OH686_22670 RND efflux system, inner membrane transporter cofit 40 98
o Dechlorosoma suillum PS Dsui_1555 cation/multidrug efflux pump cofit 40 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4261 RND multidrug efflux transporter; Acriflavin resistance protein insig. 41 97
o Acidovorax sp. GW101-3H11 Ac3H11_482 RND multidrug efflux transporter; Acriflavin resistance protein insig. 39 97
  Marinobacter adhaerens HP15 HP15_3693 multidrug resistance protein insig. 37 99
  Shewanella oneidensis MR-1 SO1882 AcrB/AcrD/AcrF family protein (NCBI ptt file) insig. 37 97
  Shewanella sp. ANA-3 Shewana3_1659 acriflavin resistance protein (RefSeq) insig. 37 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19050 efflux RND transporter permease subunit insig. 36 97
  Shewanella loihica PV-4 Shew_1852 acriflavin resistance protein (RefSeq) strong 37 97
  Lysobacter sp. OAE881 ABIE51_RS16985 efflux RND transporter permease subunit insig. 38 99
  Shewanella amazonensis SB2B Sama_1905 AcrB/AcrD/AcrF family protein (RefSeq) strong 37 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0681 Cation/multidrug efflux pump cofit 36 97
  Phocaeicola dorei CL03T12C01 ABI39_RS09435 efflux RND transporter permease subunit insig. 36 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13825 efflux RND transporter permease subunit insig. 35 97
  Bacteroides ovatus ATCC 8483 BACOVA_03090 RND transporter, HAE1 family insig. 34 97
  Bacteroides stercoris CC31F HMPREF1181_RS09455 efflux RND transporter permease subunit insig. 34 98
  Bacteroides thetaiotaomicron VPI-5482 BT2252 multidrug efflux membrane fusion protein (NCBI ptt file) insig. 34 97
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05470 efflux RND transporter permease subunit insig. 34 97
  Alteromonas macleodii MIT1002 MIT1002_00729 putative efflux pump membrane transporter TtgB insig. 36 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13040 acriflavin resistance protein insig. 35 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1262.1 RND multidrug efflux transporter; Acriflavin resistance protein insig. 36 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_04695 AcrB/AcrD/AcrF family protein insig. 36 100
  Rhodospirillum rubrum S1H Rru_A2094 Acriflavin resistance protein (NCBI) insig. 35 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17650 acriflavin resistance protein insig. 33 100
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3804 Cation/multidrug efflux pump insig. 36 97
  Shewanella oneidensis MR-1 SO3484 AcrB/AcrD/AcrF family protein (NCBI ptt file) sig. 35 97
  Shewanella sp. ANA-3 Shewana3_1083 acriflavin resistance protein (RefSeq) insig. 35 97
  Shewanella oneidensis MR-1 SO4014 AcrB/AcrD/AcrF family protein (NCBI ptt file) strong 35 97
  Shewanella loihica PV-4 Shew_1178 acriflavin resistance protein (RefSeq) insig. 35 98
  Rhizobium sp. OAE497 ABIE40_RS11655 efflux RND transporter permease subunit insig. 33 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU0061 multidrug resistance protein, putative (TIGR) strong 32 97
  Burkholderia phytofirmans PsJN BPHYT_RS20640 multidrug efflux RND transporter permease subunit insig. 33 98
  Marinobacter adhaerens HP15 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family insig. 33 97
  Shewanella loihica PV-4 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 33 96
  Agrobacterium fabrum C58 Atu2054 AcrB/AcrD/AcrF family protein insig. 33 100
  Sinorhizobium meliloti 1021 SMc01457 transport transmembrane protein strong 33 97
  Bacteroides thetaiotaomicron VPI-5482 BT1966 multidrug resistance protein, AcrB/AcrD family (NCBI ptt file) insig. 32 97
  Pseudomonas sp. S08-1 OH686_07370 RND efflux system, inner membrane transporter cofit 33 96
o Synechococcus elongatus PCC 7942 Synpcc7942_2369 acrF Hydrophobe/amphiphile efflux-1 HAE1 strong 32 97
o Acinetobacter radioresistens SK82 MPMX26_00689 Multidrug resistance protein MexB strong 32 97
  Dechlorosoma suillum PS Dsui_1871 hydrophobe/amphiphile efflux-1 (HAE1) family transporter strong 31 97
  Bacteroides ovatus ATCC 8483 BACOVA_01389 RND transporter, HAE1 family insig. 32 97
o Methylophilus sp. DMC18 GFF1649 Efflux pump membrane transporter BepE cofit 32 97
  Rhizobium sp. OAE497 ABIE40_RS24225 efflux RND transporter permease subunit insig. 32 99
  Phocaeicola dorei CL03T12C01 ABI39_RS08280 efflux RND transporter permease subunit insig. 31 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00675 efflux RND transporter permease subunit insig. 32 99
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07780 efflux RND transporter permease subunit insig. 34 97
o Enterobacter asburiae PDN3 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 33 96
o Klebsiella michiganensis M5al BWI76_RS06775 multidrug efflux RND transporter permease subunit strong 32 96
o Escherichia coli BL21 ECD_02361 aminoglycoside/multidrug efflux system insig. 31 97
o Escherichia fergusonii Becca EFB2_01418 Multidrug efflux pump subunit AcrB insig. 31 97
o Escherichia coli ECOR38 HEPCGN_21140 acrD multidrug efflux RND transporter permease AcrD insig. 31 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01261 Multidrug efflux pump subunit AcrB insig. 31 97
o Escherichia coli BW25113 b2470 acrD aminoglycoside/multidrug efflux system (NCBI) strong 31 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06015 efflux RND transporter permease subunit cofit 30 96
  Pseudomonas aeruginosa PA14 IKLFDK_12250 multidrug efflux RND transporter permease subunit MexF insig. 33 99
o Escherichia coli ECRC62 BNILDI_12460 acrD multidrug efflux RND transporter permease AcrD insig. 31 97
  Phocaeicola dorei CL03T12C01 ABI39_RS18010 efflux RND transporter permease subunit insig. 30 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4246 RND efflux system, inner membrane transporter CmeB insig. 32 97