Homologs of CA265_RS03000 from Pedobacter sp. GW460-11-11-14-LB5

RNA-binding protein
SEED: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
KEGG: ribosome-associated heat shock protein Hsp15

94 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03000 RNA-binding protein insig. 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17435 RNA-binding S4 domain-containing protein insig. 69 100
o Azospirillum brasilense Sp245 AZOBR_RS00975 tRNA synthetase RNA-binding protein insig. 42 94
o Azospirillum sp. SherDot2 MPMX19_00006 Heat shock protein 15 insig. 43 91
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS15660 RNA-binding S4 domain-containing protein insig. 40 89
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04700 RNA-binding S4 domain-containing protein insig. 41 89
o Phocaeicola dorei CL03T12C01 ABI39_RS18935 RNA-binding S4 domain-containing protein insig. 41 89
o Bacteroides stercoris CC31F HMPREF1181_RS12005 RNA-binding S4 domain-containing protein insig. 38 88
o Bacteroides ovatus ATCC 8483 BACOVA_05382 S4 domain protein insig. 36 88
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04696 heat shock protein Hsp15 insig. 39 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS01005 RNA-binding S4 domain-containing protein insig. 38 92
o Alteromonas macleodii MIT1002 MIT1002_03974 Heat shock protein 15 insig. 37 88
o Dechlorosoma suillum PS Dsui_1179 ribosome-associated heat shock protein implicated in recycling of 50S subunit insig. 37 95
o Paraburkholderia graminis OAS925 ABIE53_000860 ribosome-associated heat shock protein Hsp15 insig. 39 92
o Bacteroides thetaiotaomicron VPI-5482 BT4587 conserved hypothetical protein (NCBI ptt file) sig. 36 88
o Pseudomonas syringae pv. syringae B728a Psyr_0170 heat shock protein Hsp15 insig. 39 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0170 heat shock protein Hsp15 insig. 39 90
o Ralstonia solanacearum PSI07 RPSI07_RS11935 RNA-binding S4 domain-containing protein no data 40 91
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5132 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) insig. 36 91
o Ralstonia solanacearum GMI1000 RS_RS13230 RNA-binding S4 domain-containing protein insig. 38 91
o Burkholderia phytofirmans PsJN BPHYT_RS03580 RNA-binding protein S4 insig. 39 92
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05370 RNA-binding S4 domain-containing protein insig. 38 89
o Ralstonia solanacearum UW163 UW163_RS08255 RNA-binding S4 domain-containing protein insig. 38 89
o Variovorax sp. SCN45 GFF528 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) insig. 40 89
o Acidovorax sp. GW101-3H11 Ac3H11_56 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) insig. 36 87
o Paraburkholderia sabiae LMG 24235 QEN71_RS26515 RNA-binding S4 domain-containing protein insig. 37 92
o Acinetobacter radioresistens SK82 MPMX26_01309 Heat shock protein 15 insig. 35 98
o Pseudomonas fluorescens FW300-N2E3 AO353_11765 RNA-binding protein insig. 34 94
o Pseudomonas sp. S08-1 OH686_11070 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit cofit 36 92
o Sinorhizobium meliloti 1021 SMc03876 HEAT shock-like protein insig. 40 90
o Variovorax sp. OAS795 ABID97_RS17750 RNA-binding S4 domain-containing protein insig. 38 89
o Pseudomonas stutzeri RCH2 Psest_3991 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) insig. 37 87
o Pseudomonas fluorescens SBW25 PFLU_RS01305 RNA-binding protein S4 insig. 36 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS01305 RNA-binding protein S4 sig. 36 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_423 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) insig. 36 89
o Herbaspirillum seropedicae SmR1 HSERO_RS01240 RNA-binding protein S4 insig. 37 86
o Pseudomonas simiae WCS417 PS417_01195 RNA-binding protein S4 insig. 35 89
o Phaeobacter inhibens DSM 17395 PGA1_c07520 putative heat shock protein insig. 37 89
o Vibrio cholerae E7946 ATCC 55056 CSW01_13800 heat-shock protein Hsp15 insig. 34 89
o Castellaniella sp019104865 MT123 ABCV34_RS06005 RNA-binding S4 domain-containing protein insig. 39 92
o Marinobacter adhaerens HP15 HP15_3496 RNA-binding S4 domain protein insig. 35 89
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1776 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) no data 35 89
o Pseudomonas putida KT2440 PP_0250 heat shock protein Hsp15 involved in ribosome recycling insig. 32 92
  Rhodospirillum rubrum S1H Rru_A0075 RNA-binding S4 (NCBI) insig. 38 86
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3901 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) insig. 35 89
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS00605 S4 domain-containing protein insig. 32 89
o Pseudomonas sp. RS175 PFR28_04872 Heat shock protein 15 insig. 31 89
o Pseudomonas fluorescens FW300-N2C3 AO356_10150 RNA-binding protein insig. 33 89
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3763.1 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) no data 36 89
o Cupriavidus basilensis FW507-4G11 RR42_RS05930 RNA-binding protein S4 insig. 34 91
o Rhodanobacter denitrificans MT42 LRK55_RS14635 RNA-binding S4 domain-containing protein cofit 37 62
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS14920 RNA-binding S4 domain-containing protein insig. 37 62
o Lysobacter sp. OAE881 ABIE51_RS07770 RNA-binding S4 domain-containing protein insig. 34 89
o Pectobacterium carotovorum WPP14 HER17_RS01720 ribosome-associated heat shock protein Hsp15 sig. 30 95
o Kangiella aquimarina DSM 16071 B158DRAFT_0687 heat shock protein Hsp15 insig. 31 94
o Rhizobium sp. OAE497 ABIE40_RS18660 RNA-binding S4 domain-containing protein insig. 34 90
o Serratia liquefaciens MT49 IAI46_23760 ribosome-associated heat shock protein Hsp15 insig. 32 99
o Shewanella amazonensis SB2B Sama_0167 heat shock protein 15 (RefSeq) insig. 31 87
o Enterobacter sp. TBS_079 MPMX20_04288 Heat shock protein 15 insig. 31 88
o Pantoea sp. MT58 IAI47_01840 ribosome-associated heat shock protein Hsp15 insig. 28 88
o Rahnella sp. WP5 EX31_RS04770 ribosome-associated heat shock protein Hsp15 insig. 32 85
o Agrobacterium fabrum C58 Atu2752 hypothetical protein insig. 33 92
o Klebsiella michiganensis M5al BWI76_RS26145 heat-shock protein Hsp15 sig. 30 88
o Shewanella loihica PV-4 Shew_3621 RNA-binding S4 domain-containing protein (RefSeq) strong 33 86
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF619 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) strong 30 86
o Erwinia tracheiphila SCR3 LU632_RS22920 hslR ribosome-associated heat shock protein Hsp15 insig. 32 89
  Rhodanobacter sp. FW510-T8 OKGIIK_03690 RNA-binding protein no data 35 62
o Escherichia fergusonii Becca EFB2_00428 Heat shock protein 15 insig. 30 86
o Escherichia coli ECOR27 NOLOHH_08850 hslR ribosome-associated heat shock protein Hsp15 cofit 30 86
o Escherichia coli ECOR38 HEPCGN_15880 hslR ribosome-associated heat shock protein Hsp15 cofit 30 86
o Escherichia coli ECRC101 OKFHMN_17060 hslR ribosome-associated heat shock protein Hsp15 insig. 30 86
o Escherichia coli ECRC101 MCAODC_07590 hslR ribosome-associated heat shock protein Hsp15 insig. 30 86
o Escherichia coli ECRC102 NIAGMN_14830 hslR ribosome-associated heat shock protein Hsp15 insig. 30 86
o Escherichia coli ECRC62 BNILDI_02670 hslR ribosome-associated heat shock protein Hsp15 insig. 30 86
o Escherichia coli ECRC98 JDDGAC_20690 hslR ribosome-associated heat shock protein Hsp15 no data 30 86
o Escherichia coli ECRC99 KEDOAH_11080 hslR ribosome-associated heat shock protein Hsp15 no data 30 86
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00303 Heat shock protein 15 insig. 30 86
o Escherichia coli Nissle 1917 ECOLIN_RS19415 ribosome-associated heat shock protein Hsp15 insig. 30 86
o Escherichia coli BW25113 b3400 hslR ribosome-associated heat shock protein Hsp15 (NCBI) insig. 30 86
o Shewanella oneidensis MR-1 SO0164 hslR heat shock protein 15 (NCBI ptt file) insig. 30 86
o Dickeya dianthicola 67-19 HGI48_RS19730 ribosome-associated heat shock protein Hsp15 insig. 32 89
o Dickeya dianthicola ME23 DZA65_RS20815 ribosome-associated heat shock protein Hsp15 insig. 32 89
o Enterobacter asburiae PDN3 EX28DRAFT_4142 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) insig. 30 86
o Dickeya dadantii 3937 DDA3937_RS19600 ribosome-associated heat shock protein Hsp15 sig. 31 89
  Magnetospirillum magneticum AMB-1 AMB_RS22505 RNA-binding S4 domain-containing protein no data 37 60
o Escherichia coli BL21 ECD_03252 ribosome-associated heat shock protein Hsp15 insig. 30 86
o Shewanella sp. ANA-3 Shewana3_0149 RNA-binding S4 domain-containing protein (RefSeq) strong 29 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1934 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) insig. 33 62
  Rhodopseudomonas palustris CGA009 TX73_002545 S4 domain-containing protein insig. 29 62
  Bosea sp. OAE506 ABIE41_RS05325 RNA-binding S4 domain-containing protein insig. 38 39
  Caulobacter crescentus NA1000 CCNA_00693 heat shock protein 15 strong 34 56
  Caulobacter crescentus NA1000 Δfur CCNA_00693 heat shock protein 15 insig. 34 56
  Fusobacterium nucleatum SB010 HUW76_10675 RNA-binding S4 domain-containing protein cofit 39 37
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15525 S4 domain-containing protein no data 32 68