Homologs of BBR_RS19555 from Bifidobacterium breve UCC2003

diaminopimelate decarboxylase
SEED: Diaminopimelate decarboxylase (EC 4.1.1.20)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bifidobacterium breve UCC2003 BBR_RS19555 diaminopimelate decarboxylase strong 100 100
o Mycobacterium tuberculosis H37Rv Rv1293 Diaminopimelate decarboxylase LysA (DAP decarboxylase) no data 34 99
  Synechococcus elongatus PCC 7942 Synpcc7942_0262 lysA diaminopimelate decarboxylase no data 37 47
  Synechococcus elongatus PCC 7942 Synpcc7942_0262 lysA diaminopimelate decarboxylase no data 38 34
  Pseudomonas fluorescens FW300-N2C3 AO356_12740 diaminopimelate decarboxylase no data 36 49
  Pseudomonas putida KT2440 PP_5227 diaminopimelate decarboxylase strong 35 48
  Pseudomonas fluorescens GW456-L13 PfGW456L13_845 Diaminopimelate decarboxylase (EC 4.1.1.20) strong 37 48
  Pseudomonas sp. RS175 PFR28_04375 Diaminopimelate decarboxylase no data 37 49
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4419 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 36 49
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2174 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 36 49
  Pseudomonas syringae pv. syringae B728a Psyr_0182 diaminopimelate decarboxylase no data 36 49
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0182 diaminopimelate decarboxylase no data 36 49
  Desulfovibrio vulgaris Miyazaki F DvMF_1010 diaminopimelate decarboxylase (RefSeq) insig. 33 48
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1295 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) strong 31 48
  Escherichia fergusonii Becca EFB2_01045 Diaminopimelate decarboxylase insig. 35 44
  Escherichia coli Nissle 1917 ECOLIN_RS15930 diaminopimelate decarboxylase insig. 35 44
  Lysobacter sp. OAE881 ABIE51_RS13675 diaminopimelate decarboxylase insig. 32 46
  Desulfovibrio vulgaris Hildenborough JW710 DVU2566 lysA-2 diaminopimelate decarboxylase (TIGR) insig. 31 51
  Escherichia coli ECOR38 HEPCGN_19565 lysA diaminopimelate decarboxylase cofit 35 44
  Escherichia coli BL21 ECD_02686 diaminopimelate decarboxylase, PLP-binding strong 35 44
  Escherichia coli ECRC62 BNILDI_10310 lysA diaminopimelate decarboxylase insig. 35 44
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00891 Diaminopimelate decarboxylase insig. 35 44
  Escherichia coli BW25113 b2838 lysA diaminopimelate decarboxylase, PLP-binding (NCBI) strong 35 44
  Acinetobacter radioresistens SK82 MPMX26_02232 Diaminopimelate decarboxylase strong 32 48
  Enterobacter sp. TBS_079 MPMX20_03705 Diaminopimelate decarboxylase strong 30 65
o Pantoea sp. MT58 IAI47_03860 diaminopimelate decarboxylase strong 28 94
  Escherichia coli ECRC101 OKFHMN_19945 lysA diaminopimelate decarboxylase insig. 34 44
  Escherichia coli ECRC101 MCAODC_10470 lysA diaminopimelate decarboxylase insig. 34 44
  Escherichia coli ECRC102 NIAGMN_17715 lysA diaminopimelate decarboxylase insig. 34 44
  Escherichia coli ECRC98 JDDGAC_23610 lysA diaminopimelate decarboxylase no data 34 44
  Escherichia coli ECRC99 KEDOAH_08185 lysA diaminopimelate decarboxylase no data 34 44
  Escherichia coli ECOR27 NOLOHH_11830 lysA diaminopimelate decarboxylase cofit 34 44
  Acidovorax sp. GW101-3H11 Ac3H11_3862 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 34 46
  Methanococcus maripaludis JJ MMJJ_RS08170 diaminopimelate decarboxylase insig. 31 45
  Enterobacter asburiae PDN3 EX28DRAFT_2916 diaminopimelate decarboxylase strong 31 65
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1323 Diaminopimelate decarboxylase (EC 4.1.1.20) insig. 31 65
  Pseudomonas fluorescens SBW25 PFLU_RS29265 diaminopimelate decarboxylase cofit 34 48
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29265 diaminopimelate decarboxylase no data 34 48
  Pseudomonas fluorescens FW300-N2E3 AO353_09035 diaminopimelate decarboxylase no data 35 49
  Pseudomonas simiae WCS417 PS417_27580 diaminopimelate decarboxylase no data 34 48
  Bosea sp. OAE506 ABIE41_RS08740 diaminopimelate decarboxylase no data 34 46
  Phaeobacter inhibens DSM 17395 PGA1_c03470 diaminopimelate decarboxylase LysA no data 31 45
  Ralstonia sp. UNC404CL21Col ABZR87_RS02640 diaminopimelate decarboxylase strong 33 45
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS12130 diaminopimelate decarboxylase insig. 32 46
  Paraburkholderia graminis OAS925 ABIE53_003749 diaminopimelate decarboxylase strong 35 45
  Pseudomonas putida KT2440 PP_2077 diaminopimelate decarboxylase sig. 32 45
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06990 diaminopimelate decarboxylase no data 34 46
  Ralstonia solanacearum UW163 UW163_RS06625 diaminopimelate decarboxylase no data 34 46
  Ralstonia solanacearum PSI07 RPSI07_RS10250 diaminopimelate decarboxylase no data 33 46
  Methanococcus maripaludis S2 MMP_RS06180 diaminopimelate decarboxylase no data 29 45
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12625 bifunctional aspartate kinase/diaminopimelate decarboxylase strong 34 39
  Caulobacter crescentus NA1000 CCNA_02296 diaminopimelate decarboxylase no data 34 46
  Caulobacter crescentus NA1000 Δfur CCNA_02296 diaminopimelate decarboxylase no data 34 46
  Rhodanobacter denitrificans MT42 LRK55_RS12365 bifunctional aspartate kinase/diaminopimelate decarboxylase cofit 34 39
  Rhodopseudomonas palustris CGA009 TX73_024635 diaminopimelate decarboxylase no data 32 46
  Shewanella amazonensis SB2B Sama_3250 diaminopimelate decarboxylase (RefSeq) strong 34 46
  Castellaniella sp019104865 MT123 ABCV34_RS12685 diaminopimelate decarboxylase no data 33 45
  Dickeya dianthicola 67-19 HGI48_RS17485 diaminopimelate decarboxylase strong 32 46
  Pseudomonas sp. S08-1 OH686_13800 diaminopimelate decarboxylase cofit 37 45
  Ralstonia solanacearum GMI1000 RS_RS14930 diaminopimelate decarboxylase no data 33 46
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05606 diaminopimelate decarboxylase no data 35 45
  Erwinia tracheiphila SCR3 LU632_RS06040 lysA diaminopimelate decarboxylase strong 29 65
  Rhodanobacter denitrificans MT42 LRK55_RS11215 diaminopimelate decarboxylase cofit 32 46
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11485 diaminopimelate decarboxylase insig. 32 46
  Klebsiella michiganensis M5al BWI76_RS23360 diaminopimelate decarboxylase strong 31 44
  Dechlorosoma suillum PS Dsui_1182 diaminopimelate decarboxylase no data 32 46
  Variovorax sp. OAS795 ABID97_RS23305 diaminopimelate decarboxylase no data 34 46
  Desulfovibrio vulgaris Miyazaki F DvMF_0353 diaminopimelate decarboxylase (RefSeq) sig. 33 37
  Sinorhizobium meliloti 1021 SMc00723 diaminopimelate DAP decarboxylase no data 32 45
  Dickeya dianthicola ME23 DZA65_RS18550 diaminopimelate decarboxylase strong 32 46
  Paraburkholderia sabiae LMG 24235 QEN71_RS28080 diaminopimelate decarboxylase strong 32 45
  Pseudomonas stutzeri RCH2 Psest_3764 diaminopimelate decarboxylase no data 36 45
  Rhodanobacter sp. FW510-T8 OKGIIK_12375 lysA diaminopimelate decarboxylase insig. 33 46
  Herbaspirillum seropedicae SmR1 HSERO_RS00950 diaminopimelate decarboxylase no data 33 46
  Shewanella loihica PV-4 Shew_0322 diaminopimelate decarboxylase (RefSeq) strong 33 46
  Burkholderia phytofirmans PsJN BPHYT_RS17930 diaminopimelate decarboxylase insig. 32 45
  Serratia liquefaciens MT49 IAI46_20520 diaminopimelate decarboxylase cofit 31 46
  Caulobacter crescentus NA1000 CCNA_02296 diaminopimelate decarboxylase no data 36 31
  Caulobacter crescentus NA1000 Δfur CCNA_02296 diaminopimelate decarboxylase no data 36 31
  Variovorax sp. SCN45 GFF5315 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 33 45
  Dinoroseobacter shibae DFL-12 Dshi_3059 diaminopimelate decarboxylase (RefSeq) no data 34 30
  Marinobacter adhaerens HP15 HP15_247 diaminopimelate decarboxylase no data 31 45
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02390 diaminopimelate decarboxylase insig. 31 46
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2051 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) strong 34 45
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19560 aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) (from data) strong 36 39
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1341 Diaminopimelate decarboxylase (EC 4.1.1.20) strong 32 46
  Dickeya dadantii 3937 DDA3937_RS17425 diaminopimelate decarboxylase strong 31 46
  Alteromonas macleodii MIT1002 MIT1002_00160 Diaminopimelate decarboxylase strong 31 45
  Rhizobium sp. OAE497 ABIE40_RS17530 diaminopimelate decarboxylase strong 31 45
  Agrobacterium fabrum C58 Atu3601 diaminopimelate decarboxylase no data 30 46
  Shewanella sp. ANA-3 Shewana3_0390 diaminopimelate decarboxylase (RefSeq) strong 31 46
  Pectobacterium carotovorum WPP14 HER17_RS03710 diaminopimelate decarboxylase strong 31 44
  Desulfovibrio vulgaris Miyazaki F DvMF_0353 diaminopimelate decarboxylase (RefSeq) sig. 31 44
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1727.1 Aspartokinase (EC 2.7.2.4) / Diaminopimelate decarboxylase (EC 4.1.1.20) sig. 31 42
  Bosea sp. OAE506 ABIE41_RS08740 diaminopimelate decarboxylase no data 32 31
  Vibrio cholerae E7946 ATCC 55056 CSW01_00635 diaminopimelate decarboxylase insig. 31 45
  Shewanella oneidensis MR-1 SO4309 lysA diaminopimelate decarboxylase (NCBI ptt file) strong 31 46
  Rhodopseudomonas palustris CGA009 TX73_024635 diaminopimelate decarboxylase no data 31 32
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12545 diaminopimelate decarboxylase strong 34 32
  Azospirillum sp. SherDot2 MPMX19_05819 Diaminopimelate decarboxylase no data 33 33