Homologs of Dshi_2762 from Dinoroseobacter shibae DFL-12

protein of unknown function DUF28 (RefSeq)
SEED: FIG000859: hypothetical protein YebC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_2762 protein of unknown function DUF28 (RefSeq) strong 100 100
o Phaeobacter inhibens DSM 17395 PGA1_c21770 DNA-binding regulatory protein, YebC/PmpR family no data 87 100
o Sinorhizobium meliloti 1021 SMc03969 hypothetical protein strong 69 100
o Bosea sp. OAE506 ABIE41_RS09460 YebC/PmpR family DNA-binding transcriptional regulator strong 68 100
o Agrobacterium fabrum C58 Atu3727 hypothetical protein strong 67 100
o Rhizobium sp. OAE497 ABIE40_RS15665 YebC/PmpR family DNA-binding transcriptional regulator insig. 65 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0824 DNA-binding regulatory protein, YebC/PmpR family no data 65 100
o Rhodopseudomonas palustris CGA009 TX73_005640 YebC/PmpR family DNA-binding transcriptional regulator sig. 63 100
o Rhodospirillum rubrum S1H Rru_A1086 hypothetical protein (RefSeq) strong 59 100
o Azospirillum brasilense Sp245 AZOBR_RS09035 transcriptional regulator insig. 59 100
o Azospirillum sp. SherDot2 MPMX19_00695 putative transcriptional regulatory protein insig. 58 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15840 YebC/PmpR family DNA-binding transcriptional regulator no data 56 100
o Magnetospirillum magneticum AMB-1 AMB_RS16265 YebC/PmpR family DNA-binding transcriptional regulator no data 58 100
o Caulobacter crescentus NA1000 CCNA_03352 YebC/PmpR transcriptional regulator strong 59 100
o Caulobacter crescentus NA1000 Δfur CCNA_03352 YebC/PmpR transcriptional regulator cofit 59 100
o Fusobacterium nucleatum SB010 HUW76_01460 YebC/PmpR family DNA-binding transcriptional regulator strong 54 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1850 FIG000859: hypothetical protein YebC strong 53 100
o Pseudomonas stutzeri RCH2 Psest_1494 DNA-binding regulatory protein, YebC/PmpR family no data 54 100
o Pseudomonas fluorescens FW300-N2C3 AO356_18010 hypothetical protein strong 53 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5534 FIG000859: hypothetical protein YebC strong 53 100
o Pseudomonas syringae pv. syringae B728a Psyr_1407 Protein of unknown function DUF28 insig. 52 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1407 Protein of unknown function DUF28 insig. 52 100
o Pseudomonas sp. S08-1 OH686_19120 Probable transcriptional regulatory protein YebC sig. 55 100
o Pseudomonas sp. RS175 PFR28_03415 Transcriptional regulatory protein PmpR strong 52 100
o Shewanella loihica PV-4 Shew_2078 hypothetical protein (RefSeq) no data 52 100
o Pseudomonas putida KT2440 PP_1214 putative transcriptional regulatory protein sig. 52 100
o Shewanella oneidensis MR-1 SO2432 conserved hypothetical protein TIGR01033 (NCBI ptt file) strong 52 100
o Shewanella sp. ANA-3 Shewana3_1954 hypothetical protein (RefSeq) insig. 52 100
o Escherichia coli BW25113 b1864 yebC hypothetical protein (NCBI) sig. 50 100
o Escherichia coli BL21 ECD_01835 UPF0082 family protein insig. 50 100
o Escherichia fergusonii Becca EFB2_02078 putative transcriptional regulatory protein YebC insig. 50 100
o Escherichia coli ECOR27 NOLOHH_16700 putative transcriptional regulatory protein YebC no data 50 100
o Escherichia coli ECOR38 HEPCGN_04665 putative transcriptional regulatory protein YebC cofit 50 100
o Escherichia coli ECRC101 OKFHMN_26255 putative transcriptional regulatory protein YebC insig. 50 100
o Escherichia coli ECRC101 MCAODC_19150 putative transcriptional regulatory protein YebC insig. 50 100
o Escherichia coli ECRC102 NIAGMN_01805 putative transcriptional regulatory protein YebC no data 50 100
o Escherichia coli ECRC62 BNILDI_15490 putative transcriptional regulatory protein YebC insig. 50 100
o Escherichia coli ECRC98 JDDGAC_00830 putative transcriptional regulatory protein YebC no data 50 100
o Escherichia coli ECRC99 KEDOAH_01850 putative transcriptional regulatory protein YebC no data 50 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01864 putative transcriptional regulatory protein YebC insig. 50 100
o Escherichia coli Nissle 1917 ECOLIN_RS10380 YebC/PmpR family DNA-binding transcriptional regulator no data 50 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1645 FIG000859: hypothetical protein YebC insig. 50 100
o Pseudomonas fluorescens FW300-N2E3 AO353_03595 hypothetical protein strong 52 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_640 FIG000859: hypothetical protein YebC no data 52 100
o Pseudomonas simiae WCS417 PS417_22460 hypothetical protein no data 52 100
o Herbaspirillum seropedicae SmR1 HSERO_RS17750 transcriptional regulator no data 53 96
o Pseudomonas fluorescens SBW25 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator cofit 52 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator strong 52 100
o Desulfovibrio vulgaris Miyazaki F DvMF_3201 hypothetical protein (RefSeq) strong 56 100
o Enterobacter asburiae PDN3 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family insig. 49 100
o Desulfovibrio vulgaris Hildenborough JW710 DVU2259 conserved hypothetical protein TIGR01033 (TIGR) strong 52 100
o Serratia liquefaciens MT49 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator cofit 50 100
o Dickeya dianthicola 67-19 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator insig. 50 100
o Dickeya dianthicola ME23 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator insig. 50 100
o Dickeya dadantii 3937 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator insig. 50 100
o Acinetobacter radioresistens SK82 MPMX26_01851 putative transcriptional regulatory protein YebC cofit 48 100
o Enterobacter sp. TBS_079 MPMX20_02769 putative transcriptional regulatory protein YebC sig. 49 100
o Klebsiella michiganensis M5al BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator no data 48 100
o Dechlorosoma suillum PS Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family strong 53 94
o Paraburkholderia graminis OAS925 ABIE53_001546 YebC/PmpR family DNA-binding regulatory protein sig. 53 98
o Cupriavidus basilensis FW507-4G11 RR42_RS04735 hypothetical protein strong 50 96
o Pectobacterium carotovorum WPP14 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator insig. 50 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04522 DNA-binding regulatory protein, YebC/PmpR family no data 52 98
o Rahnella sp. WP5 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator insig. 48 100
o Burkholderia phytofirmans PsJN BPHYT_RS06410 transcriptional regulator sig. 52 98
o Pantoea sp. MT58 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator strong 48 100
o Erwinia tracheiphila SCR3 LU632_RS13425 YebC/PmpR family DNA-binding transcriptional regulator insig. 49 100
o Shewanella amazonensis SB2B Sama_1842 hypothetical protein (RefSeq) insig. 47 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1123 DNA-binding regulatory protein, YebC/PmpR family strong 48 96
o Ralstonia solanacearum PSI07 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator no data 50 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03540 YebC/PmpR family DNA-binding transcriptional regulator no data 49 96
o Ralstonia solanacearum UW163 UW163_RS10130 YebC/PmpR family DNA-binding transcriptional regulator no data 49 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS24395 YebC/PmpR family DNA-binding transcriptional regulator strong 51 98
o Ralstonia solanacearum GMI1000 RS_RS10990 YebC/PmpR family DNA-binding transcriptional regulator sig. 50 96
o Bifidobacterium breve UCC2003 BBR_RS15645 YebC/PmpR family DNA-binding transcriptional regulator no data 49 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS15405 YebC/PmpR family DNA-binding transcriptional regulator sig. 51 96
o Marinobacter adhaerens HP15 HP15_2043 protein YebC insig. 45 100
o Synechococcus elongatus PCC 7942 Synpcc7942_1017 hypothetical protein insig. 46 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01650 YebC/PmpR family DNA-binding transcriptional regulator strong 48 100
o Variovorax sp. OAS795 ABID97_RS16740 YebC/PmpR family DNA-binding transcriptional regulator strong 52 89
o Castellaniella sp019104865 MT123 ABCV34_RS02555 YebC/PmpR family DNA-binding transcriptional regulator no data 48 94
o Mycobacterium tuberculosis H37Rv Rv2603c Highly conserved protein no data 46 100
o Variovorax sp. SCN45 GFF303 Probable transcriptional regulatory protein YebC cofit 52 98
o Acidovorax sp. GW101-3H11 Ac3H11_2422 FIG000859: hypothetical protein no data 51 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4523 FIG000859: hypothetical protein YebC strong 51 96
o Lysobacter sp. OAE881 ABIE51_RS05035 YebC/PmpR family DNA-binding transcriptional regulator insig. 47 92
o Rhodanobacter sp. FW510-T8 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator insig. 43 93
o Rhodanobacter denitrificans MT42 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator strong 41 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator strong 41 93
  Escherichia coli ECRC101 OKFHMN_25175 ycdB putative transcriptional regulatory protein YcdB insig. 40 93
  Escherichia coli ECRC101 MCAODC_20215 ycdB putative transcriptional regulatory protein YcdB no data 40 93
  Escherichia coli ECRC102 NIAGMN_22680 ycdB putative transcriptional regulatory protein YcdB no data 40 93
  Escherichia coli ECRC98 JDDGAC_29305 ycdB putative transcriptional regulatory protein YcdB no data 40 93
  Escherichia coli ECRC99 KEDOAH_02935 ycdB putative transcriptional regulatory protein YcdB no data 40 93
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC insig. 47 94
  Escherichia coli BL21 ECD_01895 UPF0082 family protein no data 40 93
  Escherichia fergusonii Becca EFB2_01929 putative transcriptional regulatory protein YeeN insig. 40 93
  Escherichia coli ECOR27 NOLOHH_16120 ycdB putative transcriptional regulatory protein YcdB no data 40 93
  Escherichia coli ECOR38 HEPCGN_03510 ycdB putative transcriptional regulatory protein YcdB cofit 40 93
  Escherichia coli ECRC62 BNILDI_14915 ycdB putative transcriptional regulatory protein YcdB insig. 40 93