Homologs of rph from Shewanella oneidensis MR-1

rph: ribonuclease PH (NCBI ptt file)
SEED: Ribonuclease PH (EC 2.7.7.56)
KEGG: ribonuclease PH

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO4256 rph ribonuclease PH (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_3777 RNAse PH (RefSeq) strong 100 100
o Shewanella loihica PV-4 Shew_3488 ribonuclease PH (RefSeq) strong 92 100
o Shewanella amazonensis SB2B Sama_0320 tRNA nucleotidyltransferase (RefSeq) strong 90 100
o Alteromonas macleodii MIT1002 MIT1002_04071 Ribonuclease PH strong 75 100
o Dickeya dianthicola 67-19 HGI48_RS00675 ribonuclease PH cofit 73 100
o Dickeya dianthicola ME23 DZA65_RS00730 ribonuclease PH insig. 73 100
o Dickeya dadantii 3937 DDA3937_RS20540 ribonuclease PH cofit 72 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0588 ribonuclease PH cofit 72 100
o Klebsiella michiganensis M5al BWI76_RS27390 ribonuclease PH strong 76 100
o Klebsiella pneumoniae MKP103 KDGMDA_08055 ribonuclease PH strong 75 100
o Pantoea sp. MT58 IAI47_00595 ribonuclease PH sig. 75 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18750 ribonuclease PH cofit 75 100
o Enterobacter sp. TBS_079 MPMX20_00092 Ribonuclease PH insig. 75 100
o Enterobacter asburiae PDN3 EX28DRAFT_3893 ribonuclease PH insig. 76 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF366 Ribonuclease PH (EC 2.7.7.56) sig. 75 100
o Escherichia coli BL21 ECD_03500 ribonuclease PH sig. 76 100
o Escherichia coli ECRC62 BNILDI_04045 rph ribonuclease PH cofit 76 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00059 Ribonuclease PH insig. 76 100
o Escherichia fergusonii Becca EFB2_00170 Ribonuclease PH sig. 75 100
o Escherichia coli ECOR27 NOLOHH_07470 rph ribonuclease PH insig. 75 100
o Escherichia coli ECOR38 HEPCGN_14410 rph ribonuclease PH insig. 75 100
o Escherichia coli ECRC100 OKFHMN_15590 rph ribonuclease PH cofit 75 100
o Escherichia coli ECRC101 MCAODC_06100 rph ribonuclease PH sig. 75 100
o Escherichia coli ECRC102 NIAGMN_13350 rph ribonuclease PH sig. 75 100
o Escherichia coli ECRC98 JDDGAC_19215 rph ribonuclease PH strong 75 100
o Escherichia coli ECRC99 KEDOAH_12555 rph ribonuclease PH no data 75 100
o Escherichia coli Nissle 1917 ECOLIN_RS20755 ribonuclease PH cofit 75 100
o Serratia liquefaciens MT49 IAI46_24850 ribonuclease PH insig. 73 100
o Erwinia amylovora T8 OLJFJH_05765 ribonuclease PH sig. 73 100
o Pectobacterium carotovorum WPP14 HER17_RS20855 ribonuclease PH cofit 74 100
o Escherichia coli BW25113 b3643 rph ribonuclease PH (NCBI) strong 78 89
o Rahnella sp. WP5 EX31_RS14505 ribonuclease PH cofit 72 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_07755 rph ribonuclease PH cofit 71 100
o Erwinia tracheiphila SCR3 LU632_RS22020 rph ribonuclease PH sig. 71 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_01115 ribonuclease PH insig. 71 100
o Pseudomonas sp. S08-1 OH686_13570 ribonuclease PH insig. 69 99
o Pseudomonas aeruginosa PA14 IKLFDK_26785 ribonuclease PH strong 68 99
o Marinobacter adhaerens HP15 HP15_300 ribonuclease PH strong 67 100
o Pseudomonas stutzeri RCH2 Psest_3813 ribonuclease PH sig. 67 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) strong 68 99
o Pseudomonas fluorescens FW300-N2E3 AO353_09260 ribonuclease PH strong 68 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) strong 68 99
o Pseudomonas sp. DMC3 GFF415 Ribonuclease PH cofit 67 99
o Ralstonia solanacearum PSI07 RPSI07_RS13840 ribonuclease PH no data 65 100
o Pseudomonas fluorescens FW300-N2C3 AO356_12500 ribonuclease PH strong 67 99
o Acinetobacter baumannii LAC-4 RR41_RS18695 ribonuclease PH no data 67 100
o Pseudomonas sp. RS175 PFR28_04420 Ribonuclease PH strong 67 99
o Pseudomonas putida KT2440 PP_5294 Ribonuclease PH strong 67 99
o Acinetobacter radioresistens SK82 MPMX26_00040 Ribonuclease PH strong 67 100
o Pseudomonas sp. SVBP6 COO64_RS01510 rph ribonuclease PH insig. 67 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) strong 66 100
o Pseudomonas fluorescens SBW25 PFLU_RS29490 ribonuclease PH strong 67 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29490 ribonuclease PH strong 67 99
o Pseudomonas simiae WCS417 PS417_27810 ribonuclease PH strong 67 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00030 Ribonuclease PH insig. 67 99
o Pseudomonas syringae pv. syringae B728a Psyr_0213 RNAse PH sig. 66 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0213 RNAse PH insig. 66 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) sig. 66 99
o Pseudomonas sp. BP01 JOY50_RS09025 rph ribonuclease PH cofit 66 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS15255 ribonuclease PH strong 64 100
o Pseudomonas segetis P6 MPMX49_00030 Ribonuclease PH strong 65 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03345 ribonuclease PH insig. 64 100
o Ralstonia solanacearum UW163 UW163_RS10375 ribonuclease PH insig. 64 100
o Methylophilus sp. DMC18 GFF2136 Ribonuclease PH insig. 65 99
o Ralstonia solanacearum GMI1000 RS_RS10830 ribonuclease PH no data 63 100
o Dechlorosoma suillum PS Dsui_0494 ribonuclease PH insig. 64 100
o Herbaspirillum seropedicae SmR1 HSERO_RS10655 ribonuclease PH sig. 63 99
o Lysobacter sp. OAE881 ABIE51_RS17285 ribonuclease PH cofit 64 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS11900 ribonuclease PH strong 64 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04008 RNAse PH sig. 63 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3254 Ribonuclease PH (EC 2.7.7.56) insig. 63 99
o Paraburkholderia graminis OAS925 ABIE53_003234 ribonuclease PH strong 63 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS03645 ribonuclease PH cofit 62 99
o Burkholderia phytofirmans PsJN BPHYT_RS15325 ribonuclease PH sig. 63 99
o Variovorax sp. SCN45 GFF2381 Ribonuclease PH (EC 2.7.7.56) cofit 63 99
o Rhizobium sp. OAE497 ABIE40_RS01640 ribonuclease PH cofit 62 100
o Sinorhizobium meliloti 1021 SMc01144 ribonuclease PH strong 62 100
o Variovorax sp. OAS795 ABID97_RS23640 ribonuclease PH sig. 62 99
o Azospirillum brasilense Sp245 AZOBR_RS02205 ribonuclease PH insig. 62 100
o Cupriavidus basilensis FW507-4G11 RR42_RS04890 ribonuclease PH sig. 60 100
o Agrobacterium fabrum C58 Atu0327 ribonuclease PH no data 61 100
o Acidovorax sp. GW101-3H11 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) insig. 65 95
o Rhodopseudomonas palustris CGA009 TX73_001710 ribonuclease PH insig. 58 100
o Xanthobacter sp. DMC5 GFF1893 Ribonuclease PH no data 60 100
o Bosea sp. OAE506 ABIE41_RS03295 ribonuclease PH insig. 58 100
o Azospirillum sp. SherDot2 MPMX19_02576 Ribonuclease PH insig. 60 100
o Castellaniella sp019104865 MT123 ABCV34_RS03515 ribonuclease PH sig. 59 99
o Magnetospirillum magneticum AMB-1 AMB_RS22760 ribonuclease PH insig. 59 100
o Rhodanobacter denitrificans MT42 LRK55_RS11470 ribonuclease PH insig. 60 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11745 ribonuclease PH strong 60 99
o Rhodanobacter sp. FW510-T8 OKGIIK_12150 rph ribonuclease PH insig. 60 99
o Rhodospirillum rubrum S1H Rru_A3641 Ribonuclease PH (NCBI) insig. 58 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS16795 ribonuclease PH no data 59 100
o Dinoroseobacter shibae DFL-12 Dshi_3463 ribonuclease PH (RefSeq) sig. 61 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13125 ribonuclease PH insig. 58 100
o Mycobacterium tuberculosis H37Rv Rv1340 Probable ribonuclease RphA (RNase PH) (tRNA nucleotidyltransferase) no data 59 99
o Bifidobacterium breve UCC2003 BBR_RS12405 ribonuclease PH strong 61 96
o Caulobacter crescentus NA1000 CCNA_00151 ribonuclease PH sig. 56 100
o Caulobacter crescentus NA1000 Δfur CCNA_00151 ribonuclease PH cofit 56 100