| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.4620.1 | | Alanine racemase (EC 5.1.1.1) | 1.0 | Xcc-8004.2947.1 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | 0.63 | 15 |
| Rhodanobacter denitrificans MT42 | 0.67 | LRK55_RS00355 | | alanine racemase | 0.50 | LRK55_RS01380 | | histidinol-phosphate transaminase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.67 | OKGIIK_06670 | alr | alanine racemase | 0.51 | OKGIIK_04955 | hisC | histidinol-phosphate transaminase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.67 | LRK54_RS00585 | | alanine racemase | 0.51 | LRK54_RS01600 | | histidinol-phosphate transaminase | — | — |
| Pseudomonas putida KT2440 | 0.64 | PP_5269 | | alanine racemase, PLP-binding | 0.19 | PP_0967 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_814 | | Alanine racemase (EC 5.1.1.1) | 0.19 | PfGW456L13_2177 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | — | — |
| Pseudomonas simiae WCS417 | 0.62 | PS417_27695 | | alanine racemase | 0.19 | PS417_08130 | | aspartate aminotransferase | — | — |
| Pseudomonas fluorescens SBW25 | 0.62 | PFLU_RS29370 | | alanine racemase | 0.18 | PFLU_RS08100 | | histidinol-phosphate transaminase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.62 | PFLU_RS29370 | | alanine racemase | 0.18 | PFLU_RS08100 | | histidinol-phosphate transaminase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_0237 | | alanine racemase | 0.16 | Psyr_4132 | | histidinol phosphate aminotransferase apoenzyme | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_0237 | | alanine racemase | 0.16 | Psyr_4132 | | histidinol phosphate aminotransferase apoenzyme | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_2146 | | Alanine racemase (EC 5.1.1.1) | 0.18 | Pf1N1B4_349 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_09145 | | alanine racemase | 0.18 | AO353_02065 | | aspartate aminotransferase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.62 | AO356_12630 | | alanine racemase | 0.19 | AO356_03460 | | aspartate aminotransferase | — | — |
| Pseudomonas sp. RS175 | 0.61 | PFR28_04397 | | Alanine racemase | 0.19 | PFR28_00908 | | Histidinol-phosphate aminotransferase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.61 | Pf6N2E2_4393 | | Alanine racemase (EC 5.1.1.1) | 0.19 | Pf6N2E2_2519 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.40 | GFF1422 | | Alanine racemase (EC 5.1.1.1) | 0.37 | GFF3911 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 78 |
| Klebsiella michiganensis M5al | 0.40 | BWI76_RS01920 | | alanine racemase | 0.38 | BWI76_RS18930 | | histidinol-phosphate transaminase | low | > 92 |
| Escherichia coli Nissle 1917 | 0.40 | ECOLIN_RS23405 | | alanine racemase | 0.38 | ECOLIN_RS11950 | | histidinol-phosphate transaminase | — | — |
| Kangiella aquimarina DSM 16071 | 0.40 | B158DRAFT_2013 | | alanine racemase | 0.18 | B158DRAFT_2325 | | histidinol-phosphate aminotransferase | low | > 40 |
| Escherichia coli ECOR38 | 0.40 | HEPCGN_11540 | alr | alanine racemase | 0.39 | HEPCGN_03215 | hisC | histidinol-phosphate transaminase | low | > 87 |
| Escherichia coli BL21 | 0.40 | ECD_03925 | | alanine racemase, biosynthetic, PLP-binding | 0.39 | ECD_01923 | | histidinol-phosphate aminotransferase | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.40 | OHPLBJKB_03990 | | Alanine racemase, biosynthetic | 0.39 | OHPLBJKB_01679 | | Histidinol-phosphate aminotransferase | low | > 73 |
| Escherichia coli ECRC62 | 0.40 | BNILDI_06350 | alr | alanine racemase | 0.39 | BNILDI_14735 | hisC | histidinol-phosphate transaminase | low | > 75 |
| Escherichia fergusonii Becca | 0.40 | EFB2_04547 | | Alanine racemase, biosynthetic | 0.39 | EFB2_01835 | | Histidinol-phosphate aminotransferase | 0.56 | 82 |
| Escherichia coli ECOR27 | 0.40 | NOLOHH_05175 | alr | alanine racemase | 0.39 | NOLOHH_15825 | hisC | histidinol-phosphate transaminase | low | > 75 |
| Escherichia coli BW25113 | 0.40 | b4053 | alr | alanine racemase (NCBI) | 0.39 | b2021 | hisC | histidinol-phosphate aminotransferase (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.40 | OKFHMN_12925 | alr | alanine racemase | 0.39 | OKFHMN_24510 | hisC | histidinol-phosphate transaminase | low | > 80 |
| Escherichia coli ECRC99 | 0.40 | KEDOAH_15225 | alr | alanine racemase | 0.39 | KEDOAH_03640 | hisC | histidinol-phosphate transaminase | — | — |
| Escherichia coli ECRC102 | 0.40 | NIAGMN_10770 | alr | alanine racemase | 0.39 | NIAGMN_22455 | hisC | histidinol-phosphate transaminase | — | — |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_02698 | | Alanine racemase, catabolic | 0.36 | MPMX20_03003 | | Histidinol-phosphate aminotransferase | low | > 85 |
| Escherichia coli ECRC98 | 0.40 | JDDGAC_16560 | alr | alanine racemase | 0.39 | JDDGAC_28620 | hisC | histidinol-phosphate transaminase | low | > 86 |
| Escherichia coli ECRC101 | 0.40 | MCAODC_03435 | alr | alanine racemase | 0.39 | MCAODC_20430 | hisC | histidinol-phosphate transaminase | low | > 87 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS17510 | | alanine racemase | 0.36 | DDA3937_RS09730 | | histidinol-phosphate transaminase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_01955 | | alanine racemase | 0.37 | CSW01_05755 | | histidinol-phosphate transaminase | — | — |
| Erwinia tracheiphila SCR3 | 0.39 | LU632_RS13065 | dadX | catabolic alanine racemase DadX | 0.35 | LU632_RS08940 | hisC | histidinol-phosphate transaminase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS10740 | | alanine racemase | 0.17 | HSERO_RS20335 | | histidinol-phosphate aminotransferase | — | — |
| Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_4259 | | alanine racemase | 0.36 | EX28DRAFT_0538 | | histidinol-phosphate aminotransferase | low | > 76 |
| Pantoea sp. MT58 | 0.39 | IAI47_08895 | | catabolic alanine racemase DadX | 0.37 | IAI47_07085 | | histidinol-phosphate transaminase | — | — |
| Dickeya dianthicola 67-19 | 0.39 | HGI48_RS17565 | | alanine racemase | 0.37 | HGI48_RS09740 | | histidinol-phosphate transaminase | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.39 | HER17_RS03655 | | alanine racemase | 0.36 | HER17_RS12235 | | histidinol-phosphate transaminase | low | > 75 |
| Rahnella sp. WP5 | 0.39 | EX31_RS11885 | | alanine racemase | 0.38 | EX31_RS11445 | | histidinol-phosphate transaminase | low | > 89 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS18650 | | alanine racemase | 0.37 | DZA65_RS10050 | | histidinol-phosphate transaminase | low | > 75 |
| Ralstonia solanacearum GMI1000 | 0.39 | RS_RS06875 | | alanine racemase | 0.20 | RS_RS04500 | | histidinol-phosphate aminotransferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS11665 | | alanine racemase | 0.19 | ABZR87_RS02495 | | histidinol-phosphate transaminase | — | — |
| Serratia liquefaciens MT49 | 0.38 | IAI46_22945 | | alanine racemase | 0.37 | IAI46_08205 | | histidinol-phosphate transaminase | low | > 86 |
| Shewanella amazonensis SB2B | 0.38 | Sama_3057 | alr | alanine racemase (RefSeq) | 0.29 | Sama_1943 | | histidinol-phosphate aminotransferase (RefSeq) | — | — |
| Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS17275 | | alanine racemase | 0.19 | RPSI07_RS10395 | | histidinol-phosphate transaminase | — | — |
| Shewanella oneidensis MR-1 | 0.38 | SO3916 | alr | alanine racemase, biosynthetic (NCBI ptt file) | 0.32 | SO2072 | hisC | histidinol-phosphate aminotransferase (NCBI ptt file) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.37 | RALBFv3_RS00205 | | alanine racemase | 0.19 | RALBFv3_RS06840 | | histidinol-phosphate transaminase | — | — |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_0714 | alr | alanine racemase (RefSeq) | 0.33 | Shewana3_1852 | | histidinol phosphate aminotransferase (RefSeq) | — | — |
| Ralstonia solanacearum UW163 | 0.37 | UW163_RS13535 | | alanine racemase | 0.19 | UW163_RS06775 | | histidinol-phosphate transaminase | — | — |
| Dechlorosoma suillum PS | 0.37 | Dsui_2411 | | alanine racemase | 0.17 | Dsui_1414 | | histidinol-phosphate aminotransferase | — | — |
| Shewanella loihica PV-4 | 0.37 | Shew_3277 | alr | alanine racemase (RefSeq) | 0.31 | Shew_2199 | | histidinol-phosphate aminotransferase (RefSeq) | — | — |
| Paraburkholderia graminis OAS925 | 0.37 | ABIE53_002527 | | alanine racemase | 0.20 | ABIE53_003700 | | histidinol-phosphate aminotransferase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_00589 | | alanine racemase | 0.19 | H281DRAFT_05654 | | histidinol phosphate aminotransferase apoenzyme | — | — |
| Alteromonas macleodii MIT1002 | 0.37 | MIT1002_00544 | | Alanine racemase | 0.34 | MIT1002_02634 | | Histidinol-phosphate aminotransferase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.37 | GFF1915 | | Alanine racemase (EC 5.1.1.1) | 0.19 | GFF1313 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | — | — |
| Variovorax sp. SCN45 | 0.36 | GFF5109 | | Alanine racemase (EC 5.1.1.1) | 0.20 | GFF5348 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.36 | QEN71_RS06315 | | alanine racemase | 0.21 | QEN71_RS27860 | | histidinol-phosphate transaminase | — | — |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS12240 | | alanine racemase | 0.19 | BPHYT_RS17705 | | histidinol-phosphate aminotransferase | — | — |
| Variovorax sp. OAS795 | 0.35 | ABID97_RS03685 | | alanine racemase | 0.20 | ABID97_RS23145 | | histidinol-phosphate transaminase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS12035 | | alanine racemase | 0.20 | RR42_RS18910 | | histidinol-phosphate aminotransferase | — | — |
| Acidovorax sp. GW101-3H11 | 0.35 | Ac3H11_3382 | | Alanine racemase, catabolic (EC 5.1.1.1) | 0.17 | Ac3H11_4729 | | histidinol-phosphate transaminase (EC 2.6.1.9) (from data) | — | — |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS06375 | | alanine racemase | 0.17 | ABCV34_RS02645 | | histidinol-phosphate transaminase | low | > 48 |
| Marinobacter adhaerens HP15 | 0.33 | HP15_630 | | alanine racemase | 0.18 | HP15_2427 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | — | — |
| Acinetobacter radioresistens SK82 | 0.31 | MPMX26_01153 | | Alanine racemase | 0.16 | MPMX26_02586 | | Histidinol-phosphate aminotransferase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.31 | ABZR86_RS08850 | | alanine racemase | 0.48 | ABZR86_RS06725 | | histidinol-phosphate transaminase | — | — |
| Synechococcus elongatus PCC 7942 | 0.25 | Synpcc7942_2201 | alr | alanine racemase | 0.18 | Synpcc7942_1030 | hisC | histidinol-phosphate aminotransferase | — | — |
| Lysobacter sp. OAE881 | 0.25 | ABIE51_RS09255 | | alanine racemase | 0.56 | ABIE51_RS13320 | | histidinol-phosphate transaminase | — | — |
| Methanococcus maripaludis JJ | 0.25 | MMJJ_RS06585 | | alanine racemase | 0.20 | MMJJ_RS08090 | | histidinol-phosphate transaminase | — | — |
| Methanococcus maripaludis S2 | 0.25 | MMP_RS07770 | | alanine racemase | 0.20 | MMP_RS06260 | | histidinol-phosphate transaminase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.23 | A4249_RS03755 | | alanine racemase | 0.18 | A4249_RS11450 | | histidinol-phosphate transaminase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.23 | DVU0955 | alr | alanine racemase (TIGR) | 0.19 | DVU1029 | hisC | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | — | — |
| Azospirillum sp. SherDot2 | 0.22 | MPMX19_06140 | | Alanine racemase, biosynthetic | 0.19 | MPMX19_04389 | | Histidinol-phosphate aminotransferase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.21 | TX73_015960 | | alanine racemase | 0.16 | TX73_023035 | | histidinol-phosphate transaminase | — | — |
| Agrobacterium fabrum C58 | 0.21 | Atu3292 | | alanine racemase | 0.16 | Atu3612 | | histidinol-phosphate aminotransferase | — | — |
| Azospirillum brasilense Sp245 | 0.20 | AZOBR_RS08350 | | alanine racemase | 0.17 | AZOBR_RS20485 | | histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) | — | — |
| Rhodospirillum rubrum S1H | 0.20 | Rru_A0409 | | Alanine racemase region (NCBI) | 0.20 | Rru_A3264 | | Histidinol-phosphate aminotransferase (NCBI) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.19 | PGA1_c10880 | | alanine racemase, biosynthetic | 0.17 | PGA1_c25240 | | histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.19 | AMB_RS10575 | | alanine racemase | 0.18 | AMB_RS20110 | | histidinol-phosphate aminotransferase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.19 | Dshi_2378 | | alanine racemase (RefSeq) | 0.16 | Dshi_2946 | | histidinol-phosphate aminotransferase (RefSeq) | — | — |
| Sinorhizobium meliloti 1021 | 0.18 | SMc00557 | | alanine racemase | 0.17 | SMa0387 | | histidinol-phosphate aminotransferase | low | > 103 |
| Rhizobium sp. OAE497 | 0.18 | ABIE40_RS06295 | | alanine racemase | 0.17 | ABIE40_RS17595 | | histidinol-phosphate transaminase | low | > 107 |
| Sphingomonas koreensis DSMZ 15582 | 0.17 | Ga0059261_0986 | | alanine racemase | 0.16 | Ga0059261_2299 | | histidinol-phosphate aminotransferase | — | — |
| Fusobacterium nucleatum SB010 | 0.16 | HUW76_08815 | | alanine racemase | 0.12 | HUW76_05250 | | threonine-phosphate decarboxylase | low | > 35 |
| Bifidobacterium breve UCC2003 | 0.14 | BBR_RS13170 | | alanine racemase | 0.15 | BBR_RS17050 | | histidinol-phosphate transaminase | — | — |
Not shown: 6 genomes with orthologs for Xcc-8004.4620.1 only; 11 genomes with orthologs for Xcc-8004.2947.1 only