| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Sinorhizobium meliloti 1021 | 1.0 | SMc00019 | | hypothetical protein | 1.0 | SMc01235 | | excinuclease ABC subunit A | 0.38 | 19 |
| Agrobacterium fabrum C58 | 0.75 | Atu0781 | | hypothetical protein | 0.89 | Atu1513 | | ABC excinuclease subunit A | 0.16 | 42 |
| Rhizobium sp. OAE497 | 0.74 | ABIE40_RS04185 | | YqgE/AlgH family protein | 0.89 | ABIE40_RS09360 | | excinuclease ABC subunit UvrA | low | > 107 |
| Bosea sp. OAE506 | 0.56 | ABIE41_RS23005 | | YqgE/AlgH family protein | 0.72 | ABIE41_RS15100 | | excinuclease ABC subunit UvrA | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.55 | TX73_004710 | | YqgE/AlgH family protein | 0.73 | TX73_014580 | | excinuclease ABC subunit UvrA | low | > 86 |
| Azospirillum brasilense Sp245 | 0.50 | AZOBR_RS10525 | | hypothetical protein | 0.68 | AZOBR_RS15370 | | excinuclease ABC subunit A | low | > 97 |
| Azospirillum sp. SherDot2 | 0.50 | MPMX19_01077 | | hypothetical protein | 0.70 | MPMX19_01152 | | UvrABC system protein A | low | > 112 |
| Magnetospirillum magneticum AMB-1 | 0.46 | AMB_RS04505 | | YqgE/AlgH family protein | 0.68 | AMB_RS12410 | | excinuclease ABC subunit UvrA | low | > 64 |
| Rhodospirillum rubrum S1H | 0.46 | Rru_A3059 | | Protein of unknown function DUF179 (NCBI) | 0.70 | Rru_A1752 | | Excinuclease ABC, A subunit (NCBI) | low | > 58 |
| Dinoroseobacter shibae DFL-12 | 0.45 | Dshi_3083 | | protein of unknown function DUF179 (RefSeq) | 0.67 | Dshi_1809 | | excinuclease ABC, A subunit (RefSeq) | low | > 64 |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS10730 | | YqgE/AlgH family protein | 0.52 | ABCV34_RS12715 | | excinuclease ABC subunit UvrA | low | > 48 |
| Phaeobacter inhibens DSM 17395 | 0.40 | PGA1_c03130 | | Putative transcriptional regulator | 0.66 | PGA1_c17370 | | uvrABC system protein A | low | > 62 |
| Pseudomonas putida KT2440 | 0.39 | PP_4995 | | putative protein possibly involved in the control of exopolysaccharide production | 0.59 | PP_0483 | | excinuclease (uvrABC system protein A) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS02315 | | transcriptional regulator | 0.58 | HSERO_RS19810 | | excinuclease ABC subunit A | 0.29 | 73 |
| Pseudomonas stutzeri RCH2 | 0.38 | Psest_0294 | | Putative transcriptional regulator | 0.59 | Psest_3576 | | excinuclease ABC, A subunit | low | > 67 |
| Caulobacter crescentus NA1000 | 0.38 | CCNA_03506 | | putative transcriptional regulator | 0.70 | CCNA_02673 | | excinuclease ABC subunit A | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.38 | CCNA_03506 | | putative transcriptional regulator | 0.70 | CCNA_02673 | | excinuclease ABC subunit A | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.38 | PfGW456L13_1019 | | UPF0301 protein YqgE | 0.59 | PfGW456L13_1283 | | Excinuclease ABC subunit A | low | > 87 |
| Acidovorax sp. GW101-3H11 | 0.38 | Ac3H11_3981 | | UPF0301 protein YqgE | 0.54 | Ac3H11_4387 | | Excinuclease ABC subunit A | low | > 79 |
| Ralstonia solanacearum GMI1000 | 0.38 | RS_RS03395 | | YqgE/AlgH family protein | 0.58 | RS_RS02080 | | excinuclease ABC subunit UvrA | — | — |
| Ralstonia solanacearum PSI07 | 0.37 | RPSI07_RS20650 | | YqgE/AlgH family protein | 0.58 | RPSI07_RS22065 | | excinuclease ABC subunit UvrA | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.37 | ABZR87_RS08610 | | YqgE/AlgH family protein | 0.58 | ABZR87_RS07120 | | excinuclease ABC subunit UvrA | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.37 | GFF648 | | UPF0301 protein YqgE | 0.55 | GFF2755 | | Excinuclease ABC subunit A | low | > 90 |
| Pseudomonas sp. S08-1 | 0.37 | OH686_10925 | | UPF0301 protein YqgE | 0.59 | OH686_15495 | | excinuclease ABC subunit A | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.37 | ABIE53_001128 | | putative transcriptional regulator | 0.57 | ABIE53_000732 | | excinuclease ABC subunit A | low | > 113 |
| Ralstonia solanacearum IBSBF1503 | 0.37 | RALBFv3_RS12610 | | DUF179 domain-containing protein | 0.57 | RALBFv3_RS11235 | | excinuclease ABC subunit UvrA | low | > 76 |
| Ralstonia solanacearum UW163 | 0.37 | UW163_RS00955 | | DUF179 domain-containing protein | 0.57 | UW163_RS02345 | | excinuclease ABC subunit UvrA | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.37 | Pf1N1B4_2350 | | UPF0301 protein YqgE | 0.59 | Pf1N1B4_2611 | | Excinuclease ABC subunit A | low | > 87 |
| Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS25795 | | YqgE/AlgH family protein | 0.56 | QEN71_RS01825 | | excinuclease ABC subunit UvrA | low | > 153 |
| Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_4609 | | UPF0301 protein YqgE | 0.59 | Pf6N2E2_4888 | | Excinuclease ABC subunit A | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.37 | Psyr_0485 | | Protein of unknown function DUF179 | 0.59 | Psyr_4520 | | Excinuclease ABC subunit A | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.37 | AO356_13465 | | hypothetical protein | 0.59 | AO356_14785 | | ABC-ATPase UvrA | low | > 104 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_04814 | | putative transcriptional regulator | 0.57 | H281DRAFT_01913 | | Excinuclease ABC subunit A | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.37 | Psyr_0485 | | Protein of unknown function DUF179 | 0.59 | Psyr_4520 | | Excinuclease ABC subunit A | low | > 86 |
| Pseudomonas simiae WCS417 | 0.36 | PS417_26685 | | hypothetical protein | 0.59 | PS417_25395 | | excinuclease ABC subunit A | low | > 88 |
| Burkholderia phytofirmans PsJN | 0.36 | BPHYT_RS04220 | | hypothetical protein | 0.57 | BPHYT_RS02970 | | excinuclease ABC subunit A | low | > 109 |
| Vibrio cholerae E7946 ATCC 55056 | 0.36 | CSW01_02485 | | YqgE/AlgH family protein | 0.56 | CSW01_02080 | | UvrABC system protein A | low | > 62 |
| Pseudomonas fluorescens FW300-N2E3 | 0.36 | AO353_08120 | | hypothetical protein | 0.59 | AO353_06855 | | ABC-ATPase UvrA | low | > 101 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.36 | Xcc-8004.1720.1 | | UPF0301 protein YqgE | 0.57 | Xcc-8004.3830.1 | | Excinuclease ABC subunit A | low | > 74 |
| Pseudomonas fluorescens SBW25-INTG | 0.36 | PFLU_RS28330 | | YqgE/AlgH family protein | 0.59 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.26 | 1 |
| Pseudomonas fluorescens SBW25 | 0.36 | PFLU_RS28330 | | YqgE/AlgH family protein | 0.59 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | low | > 109 |
| Marinobacter adhaerens HP15 | 0.36 | HP15_3510 | | transcriptional regulator | 0.57 | HP15_406 | | excinuclease ABC, ATPase subunit (A) | low | > 73 |
| Cupriavidus basilensis FW507-4G11 | 0.36 | RR42_RS15875 | | hypothetical protein | 0.57 | RR42_RS02145 | | excinuclease ABC subunit A | low | > 128 |
| Pseudomonas sp. RS175 | 0.36 | PFR28_04234 | | hypothetical protein | 0.59 | PFR28_03974 | | UvrABC system protein A | low | > 88 |
| Dyella japonica UNC79MFTsu3.2 | 0.35 | ABZR86_RS10380 | | YqgE/AlgH family protein | 0.57 | ABZR86_RS00910 | | excinuclease ABC subunit UvrA | — | — |
| Rhodanobacter sp. FW510-T8 | 0.35 | OKGIIK_11085 | algH | YqgE/AlgH family protein | 0.56 | OKGIIK_03980 | uvrA | excinuclease ABC subunit UvrA | low | > 52 |
| Shewanella amazonensis SB2B | 0.35 | Sama_2472 | | putative transcriptional regulator (RefSeq) | 0.55 | Sama_0514 | | excinuclease ABC, A subunit (RefSeq) | low | > 62 |
| Kangiella aquimarina DSM 16071 | 0.35 | B158DRAFT_0191 | | Putative transcriptional regulator | 0.58 | B158DRAFT_0885 | | excinuclease ABC, A subunit | low | > 40 |
| Rhodanobacter denitrificans MT42 | 0.35 | LRK55_RS03980 | | YqgE/AlgH family protein | 0.57 | LRK55_RS14925 | | excinuclease ABC subunit UvrA | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.35 | LRK54_RS04210 | | YqgE/AlgH family protein | 0.57 | LRK54_RS15210 | | excinuclease ABC subunit UvrA | low | > 59 |
| Variovorax sp. OAS795 | 0.35 | ABID97_RS24675 | | YqgE/AlgH family protein | 0.55 | ABID97_RS04340 | | excinuclease ABC subunit UvrA | low | > 91 |
| Variovorax sp. SCN45 | 0.35 | GFF2157 | | UPF0301 protein YqgE | 0.55 | GFF4944 | | Excinuclease ABC subunit A | low | > 127 |
| Pantoea sp. MT58 | 0.34 | IAI47_03610 | | YqgE/AlgH family protein | 0.57 | IAI47_17815 | | excinuclease ABC subunit UvrA | low | > 76 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.34 | A4249_RS00260 | | YqgE/AlgH family protein | 0.70 | A4249_RS08575 | | excinuclease ABC subunit UvrA | low | > 48 |
| Dechlorosoma suillum PS | 0.34 | Dsui_0593 | | putative transcriptional regulator | 0.59 | Dsui_1622 | | excinuclease ABC, A subunit | low | > 51 |
| Alteromonas macleodii MIT1002 | 0.34 | MIT1002_03056 | | hypothetical protein | 0.57 | MIT1002_00179 | | Excinuclease ABC subunit A | low | > 70 |
| Sphingomonas koreensis DSMZ 15582 | 0.33 | Ga0059261_4015 | | Putative transcriptional regulator | 0.68 | Ga0059261_0674 | | excinuclease ABC, A subunit | low | > 68 |
| Pectobacterium carotovorum WPP14 | 0.33 | HER17_RS02630 | | YqgE/AlgH family protein | 0.56 | HER17_RS03550 | | excinuclease ABC subunit UvrA | low | > 75 |
| Shewanella loihica PV-4 | 0.33 | Shew_1144 | | hypothetical protein (RefSeq) | 0.55 | Shew_0533 | | excinuclease ABC, A subunit (RefSeq) | low | > 60 |
| Erwinia tracheiphila SCR3 | 0.33 | LU632_RS05475 | | YqgE/AlgH family protein | 0.56 | LU632_RS23685 | uvrA | excinuclease ABC subunit UvrA | low | > 74 |
| Shewanella oneidensis MR-1 | 0.33 | SO3346 | | conserved hypothetical protein (NCBI ptt file) | 0.56 | SO4030 | uvrA | excinuclease ABC, A subunit (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.33 | Shewana3_1200 | | hypothetical protein (RefSeq) | 0.56 | Shewana3_3592 | | excinuclease ABC subunit A (RefSeq) | low | > 73 |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS19635 | | YqgE/AlgH family protein | 0.57 | DZA65_RS18735 | | excinuclease ABC subunit UvrA | low | > 75 |
| Klebsiella michiganensis M5al | 0.32 | BWI76_RS24080 | | DUF179 domain-containing protein | 0.57 | BWI76_RS01950 | | excinuclease ABC subunit A | low | > 92 |
| Dickeya dianthicola 67-19 | 0.32 | HGI48_RS18500 | | YqgE/AlgH family protein | 0.57 | HGI48_RS17610 | | excinuclease ABC subunit UvrA | low | > 71 |
| Serratia liquefaciens MT49 | 0.32 | IAI46_21395 | | YqgE/AlgH family protein | 0.56 | IAI46_22905 | | excinuclease ABC subunit UvrA | low | > 86 |
| Dickeya dadantii 3937 | 0.32 | DDA3937_RS18565 | | YqgE/AlgH family protein | 0.57 | DDA3937_RS17605 | | excinuclease ABC subunit UvrA | low | > 74 |
| Enterobacter asburiae PDN3 | 0.32 | EX28DRAFT_2986 | | Putative transcriptional regulator | 0.56 | EX28DRAFT_4246 | | excinuclease ABC, A subunit | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.32 | GFF3050 | | UPF0301 protein YqgE | 0.56 | GFF1429 | | Excinuclease ABC subunit A | low | > 78 |
| Acinetobacter radioresistens SK82 | 0.31 | MPMX26_00238 | | hypothetical protein | 0.56 | MPMX26_02892 | | UvrABC system protein A | low | > 36 |
| Enterobacter sp. TBS_079 | 0.31 | MPMX20_03806 | | hypothetical protein | 0.56 | MPMX20_00276 | | UvrABC system protein A | low | > 85 |
| Escherichia coli ECRC101 | 0.31 | MCAODC_09790 | yqgE | YqgE/AlgH family protein | 0.56 | MCAODC_03405 | uvrA | excinuclease ABC subunit UvrA | low | > 87 |
| Escherichia coli BW25113 | 0.31 | b2948 | yqgE | orf, hypothetical protein (VIMSS) | 0.56 | b4058 | uvrA | excinuclease ABC subunit A (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.31 | NIAGMN_17035 | yqgE | YqgE/AlgH family protein | 0.56 | NIAGMN_10740 | uvrA | excinuclease ABC subunit UvrA | — | — |
| Escherichia coli ECOR27 | 0.31 | NOLOHH_11140 | yqgE | YqgE/AlgH family protein | 0.56 | NOLOHH_05145 | uvrA | excinuclease ABC subunit UvrA | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.31 | OHPLBJKB_00770 | | hypothetical protein | 0.56 | OHPLBJKB_03983 | | UvrABC system protein A | 0.34 | 35 |
| Escherichia coli BL21 | 0.31 | ECD_02778 | | uncharacterized protein | 0.56 | ECD_03930 | | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC | low | > 61 |
| Escherichia coli ECRC100 | 0.31 | OKFHMN_19270 | yqgE | YqgE/AlgH family protein | 0.56 | OKFHMN_12895 | uvrA | excinuclease ABC subunit UvrA | low | > 80 |
| Escherichia coli Nissle 1917 | 0.31 | ECOLIN_RS16400 | | YqgE/AlgH family protein | 0.56 | ECOLIN_RS23485 | | excinuclease ABC subunit UvrA | low | > 55 |
| Escherichia fergusonii Becca | 0.31 | EFB2_00954 | | hypothetical protein | 0.56 | EFB2_04533 | | UvrABC system protein A | low | > 86 |
| Escherichia coli ECRC99 | 0.31 | KEDOAH_08870 | algH | YqgE/AlgH family protein | 0.56 | KEDOAH_15255 | uvrA | excinuclease ABC subunit UvrA | — | — |
| Escherichia coli ECRC62 | 0.31 | BNILDI_09720 | yqgE | YqgE/AlgH family protein | 0.56 | BNILDI_06380 | uvrA | excinuclease ABC subunit UvrA | low | > 75 |
| Escherichia coli ECRC98 | 0.31 | JDDGAC_22900 | yqgE | YqgE/AlgH family protein | 0.56 | JDDGAC_16530 | uvrA | excinuclease ABC subunit UvrA | low | > 86 |
| Escherichia coli ECOR38 | 0.31 | HEPCGN_18575 | yqgE | YqgE/AlgH family protein | 0.56 | HEPCGN_11510 | uvrA | excinuclease ABC subunit UvrA | low | > 87 |
| Rahnella sp. WP5 | 0.30 | EX31_RS02670 | | YqgE/AlgH family protein | 0.57 | EX31_RS11990 | | excinuclease ABC subunit UvrA | low | > 89 |
| Bacteroides ovatus ATCC 8483 | 0.20 | BACOVA_04061 | | putative ACR, COG1678 | 0.50 | BACOVA_03703 | | excinuclease ABC, A subunit | low | > 94 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.20 | Echvi_3442 | | Putative transcriptional regulator | 0.51 | Echvi_1138 | | excinuclease ABC, A subunit | low | > 79 |
| Parabacteroides merdae CL09T00C40 | 0.20 | HMPREF1078_RS07600 | | YqgE/AlgH family protein | 0.49 | HMPREF1078_RS00835 | | excinuclease ABC subunit UvrA | low | > 61 |
| Phocaeicola dorei CL03T12C01 | 0.19 | ABI39_RS14885 | | YqgE/AlgH family protein | 0.49 | ABI39_RS15330 | | excinuclease ABC subunit UvrA | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.19 | HMPREF1058_RS18575 | | YqgE/AlgH family protein | 0.49 | HMPREF1058_RS01735 | | excinuclease ABC subunit UvrA | low | > 67 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.19 | BT1078 | | putative transcriptional regulator (NCBI ptt file) | 0.50 | BT0578 | | excinuclease ABC subunit A (NCBI ptt file) | low | > 81 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.18 | CA265_RS07725 | | hypothetical protein | 0.49 | CA265_RS25080 | | excinuclease ABC subunit A | low | > 88 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.17 | CA264_05580 | | hypothetical protein | 0.50 | CA264_18100 | | ABC-ATPase UvrA | low | > 74 |
Not shown: 1 genomes with orthologs for SMc00019 only; 10 genomes with orthologs for SMc01235 only