| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0485 | | Protein of unknown function DUF179 | 1.0 | Psyr_1407 | | Protein of unknown function DUF28 | 0.34 | 14 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0485 | | Protein of unknown function DUF179 | 1.00 | Psyr_1407 | | Protein of unknown function DUF28 | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.75 | Pf1N1B4_2350 | | UPF0301 protein YqgE | 0.86 | Pf1N1B4_640 | | FIG000859: hypothetical protein YebC | — | — |
| Pseudomonas sp. RS175 | 0.75 | PFR28_04234 | | hypothetical protein | 0.89 | PFR28_03415 | | Transcriptional regulatory protein PmpR | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.74 | PFLU_RS28330 | | YqgE/AlgH family protein | 0.86 | PFLU_RS24100 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.74 | PFLU_RS28330 | | YqgE/AlgH family protein | 0.86 | PFLU_RS24100 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.74 | PS417_26685 | | hypothetical protein | 0.86 | PS417_22460 | | hypothetical protein | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_4609 | | UPF0301 protein YqgE | 0.89 | Pf6N2E2_5534 | | FIG000859: hypothetical protein YebC | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.74 | AO356_13465 | | hypothetical protein | 0.89 | AO356_18010 | | hypothetical protein | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.73 | AO353_08120 | | hypothetical protein | 0.86 | AO353_03595 | | hypothetical protein | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.73 | PfGW456L13_1019 | | UPF0301 protein YqgE | 0.91 | PfGW456L13_1850 | | FIG000859: hypothetical protein YebC | low | > 87 |
| Pseudomonas sp. S08-1 | 0.69 | OH686_10925 | | UPF0301 protein YqgE | 0.75 | OH686_19120 | | Probable transcriptional regulatory protein YebC | low | > 80 |
| Pseudomonas putida KT2440 | 0.69 | PP_4995 | | putative protein possibly involved in the control of exopolysaccharide production | 0.83 | PP_1214 | | putative transcriptional regulatory protein | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.66 | Psest_0294 | | Putative transcriptional regulator | 0.75 | Psest_1494 | | DNA-binding regulatory protein, YebC/PmpR family | — | — |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS03395 | | YqgE/AlgH family protein | 0.53 | RS_RS10990 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_04814 | | putative transcriptional regulator | 0.56 | H281DRAFT_04522 | | DNA-binding regulatory protein, YebC/PmpR family | — | — |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS04220 | | hypothetical protein | 0.56 | BPHYT_RS06410 | | transcriptional regulator | low | > 109 |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS12610 | | DUF179 domain-containing protein | 0.53 | RALBFv3_RS03540 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS00955 | | DUF179 domain-containing protein | 0.53 | UW163_RS10130 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS20650 | | YqgE/AlgH family protein | 0.53 | RPSI07_RS13685 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Paraburkholderia graminis OAS925 | 0.45 | ABIE53_001128 | | putative transcriptional regulator | 0.56 | ABIE53_001546 | | YebC/PmpR family DNA-binding regulatory protein | low | > 113 |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS24675 | | YqgE/AlgH family protein | 0.50 | ABID97_RS16740 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 91 |
| Cupriavidus basilensis FW507-4G11 | 0.44 | RR42_RS15875 | | hypothetical protein | 0.55 | RR42_RS04735 | | hypothetical protein | low | > 128 |
| Variovorax sp. SCN45 | 0.44 | GFF2157 | | UPF0301 protein YqgE | 0.51 | GFF303 | | Probable transcriptional regulatory protein YebC | low | > 127 |
| Magnetospirillum magneticum AMB-1 | 0.44 | AMB_RS04505 | | YqgE/AlgH family protein | 0.46 | AMB_RS16265 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS08610 | | YqgE/AlgH family protein | 0.53 | ABZR87_RS15405 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 80 |
| Alteromonas macleodii MIT1002 | 0.43 | MIT1002_03056 | | hypothetical protein | 0.31 | MIT1002_00845 | | putative transcriptional regulatory protein YeeN | low | > 70 |
| Paraburkholderia sabiae LMG 24235 | 0.43 | QEN71_RS25795 | | YqgE/AlgH family protein | 0.55 | QEN71_RS24395 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 153 |
| Shewanella sp. ANA-3 | 0.42 | Shewana3_1200 | | hypothetical protein (RefSeq) | 0.70 | Shewana3_1954 | | hypothetical protein (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.42 | SO3346 | | conserved hypothetical protein (NCBI ptt file) | 0.70 | SO2432 | | conserved hypothetical protein TIGR01033 (NCBI ptt file) | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.42 | Ac3H11_3981 | | UPF0301 protein YqgE | 0.50 | Ac3H11_2422 | | FIG000859: hypothetical protein | — | — |
| Marinobacter adhaerens HP15 | 0.42 | HP15_3510 | | transcriptional regulator | 0.62 | HP15_2043 | | protein YebC | low | > 73 |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS04185 | | YqgE/AlgH family protein | 0.46 | ABIE40_RS15665 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 107 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF648 | | UPF0301 protein YqgE | 0.51 | GFF4523 | | FIG000859: hypothetical protein YebC | low | > 90 |
| Dechlorosoma suillum PS | 0.40 | Dsui_0593 | | putative transcriptional regulator | 0.55 | Dsui_0489 | | DNA-binding regulatory protein, YebC/PmpR family | low | > 51 |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS10525 | | hypothetical protein | 0.44 | AZOBR_RS09035 | | transcriptional regulator | low | > 97 |
| Rhodopseudomonas palustris CGA009 | 0.40 | TX73_004710 | | YqgE/AlgH family protein | 0.45 | TX73_005640 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS02630 | | YqgE/AlgH family protein | 0.68 | HER17_RS11855 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 75 |
| Castellaniella sp019104865 MT123 | 0.40 | ABCV34_RS10730 | | YqgE/AlgH family protein | 0.51 | ABCV34_RS02555 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Herbaspirillum seropedicae SmR1 | 0.40 | HSERO_RS02315 | | transcriptional regulator | 0.57 | HSERO_RS17750 | | transcriptional regulator | — | — |
| Azospirillum sp. SherDot2 | 0.39 | MPMX19_01077 | | hypothetical protein | 0.44 | MPMX19_00695 | | putative transcriptional regulatory protein | low | > 112 |
| Serratia liquefaciens MT49 | 0.39 | IAI46_21395 | | YqgE/AlgH family protein | 0.67 | IAI46_14635 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 86 |
| Agrobacterium fabrum C58 | 0.39 | Atu0781 | | hypothetical protein | 0.47 | Atu3727 | | hypothetical protein | 0.14 | 68 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS18565 | | YqgE/AlgH family protein | 0.68 | DDA3937_RS10065 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 74 |
| Rhodospirillum rubrum S1H | 0.39 | Rru_A3059 | | Protein of unknown function DUF179 (NCBI) | 0.41 | Rru_A1086 | | hypothetical protein (RefSeq) | low | > 58 |
| Pantoea sp. MT58 | 0.39 | IAI47_03610 | | YqgE/AlgH family protein | 0.69 | IAI47_08435 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_02485 | | YqgE/AlgH family protein | 0.31 | CSW01_14085 | | transcriptional regulator | low | > 62 |
| Bosea sp. OAE506 | 0.38 | ABIE41_RS23005 | | YqgE/AlgH family protein | 0.48 | ABIE41_RS09460 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 77 |
| Sinorhizobium meliloti 1021 | 0.38 | SMc00019 | | hypothetical protein | 0.48 | SMc03969 | | hypothetical protein | low | > 103 |
| Dickeya dianthicola ME23 | 0.38 | DZA65_RS19635 | | YqgE/AlgH family protein | 0.68 | DZA65_RS10510 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 75 |
| Shewanella amazonensis SB2B | 0.38 | Sama_2472 | | putative transcriptional regulator (RefSeq) | 0.68 | Sama_1842 | | hypothetical protein (RefSeq) | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.38 | LU632_RS05475 | | YqgE/AlgH family protein | 0.65 | LU632_RS13425 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 74 |
| Dickeya dianthicola 67-19 | 0.38 | HGI48_RS18500 | | YqgE/AlgH family protein | 0.68 | HGI48_RS10095 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 71 |
| Dyella japonica UNC79MFTsu3.2 | 0.38 | ABZR86_RS10380 | | YqgE/AlgH family protein | 0.41 | ABZR86_RS10850 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Lysobacter sp. OAE881 | 0.38 | ABIE51_RS16025 | | YqgE/AlgH family protein | 0.50 | ABIE51_RS05035 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 62 |
| Klebsiella michiganensis M5al | 0.38 | BWI76_RS24080 | | DUF179 domain-containing protein | 0.67 | BWI76_RS18160 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.38 | Xcc-8004.1720.1 | | UPF0301 protein YqgE | 0.49 | Xcc-8004.1434.1 | | FIG000859: hypothetical protein YebC | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.38 | GFF3050 | | UPF0301 protein YqgE | 0.67 | GFF1645 | | FIG000859: hypothetical protein YebC | low | > 78 |
| Kangiella aquimarina DSM 16071 | 0.37 | B158DRAFT_0191 | | Putative transcriptional regulator | 0.64 | B158DRAFT_1123 | | DNA-binding regulatory protein, YebC/PmpR family | low | > 40 |
| Escherichia coli ECRC99 | 0.37 | KEDOAH_08870 | algH | YqgE/AlgH family protein | 0.67 | KEDOAH_01850 | | putative transcriptional regulatory protein YebC | — | — |
| Escherichia coli ECRC98 | 0.37 | JDDGAC_22900 | yqgE | YqgE/AlgH family protein | 0.67 | JDDGAC_00830 | | putative transcriptional regulatory protein YebC | low | > 86 |
| Escherichia coli ECOR27 | 0.37 | NOLOHH_11140 | yqgE | YqgE/AlgH family protein | 0.67 | NOLOHH_16700 | | putative transcriptional regulatory protein YebC | low | > 75 |
| Escherichia coli ECRC102 | 0.37 | NIAGMN_17035 | yqgE | YqgE/AlgH family protein | 0.67 | NIAGMN_01805 | | putative transcriptional regulatory protein YebC | — | — |
| Escherichia coli ECRC100 | 0.37 | OKFHMN_19270 | yqgE | YqgE/AlgH family protein | 0.67 | OKFHMN_26255 | | putative transcriptional regulatory protein YebC | low | > 80 |
| Escherichia coli ECRC62 | 0.37 | BNILDI_09720 | yqgE | YqgE/AlgH family protein | 0.67 | BNILDI_15490 | | putative transcriptional regulatory protein YebC | low | > 75 |
| Escherichia coli ECRC101 | 0.37 | MCAODC_09790 | yqgE | YqgE/AlgH family protein | 0.67 | MCAODC_19150 | | putative transcriptional regulatory protein YebC | low | > 87 |
| Escherichia coli Nissle 1917 | 0.37 | ECOLIN_RS16400 | | YqgE/AlgH family protein | 0.67 | ECOLIN_RS10380 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 55 |
| Escherichia coli ECOR38 | 0.37 | HEPCGN_18575 | yqgE | YqgE/AlgH family protein | 0.67 | HEPCGN_04665 | | putative transcriptional regulatory protein YebC | low | > 87 |
| Rhodanobacter denitrificans FW104-10B01 | 0.37 | LRK54_RS04210 | | YqgE/AlgH family protein | 0.46 | LRK54_RS04920 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 59 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.37 | OHPLBJKB_00770 | | hypothetical protein | 0.67 | OHPLBJKB_01864 | | putative transcriptional regulatory protein YebC | low | > 73 |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS03980 | | YqgE/AlgH family protein | 0.46 | LRK55_RS04700 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Escherichia coli BL21 | 0.37 | ECD_02778 | | uncharacterized protein | 0.67 | ECD_01835 | | UPF0082 family protein | low | > 61 |
| Escherichia coli BW25113 | 0.37 | b2948 | yqgE | orf, hypothetical protein (VIMSS) | 0.67 | b1864 | yebC | hypothetical protein (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.37 | EFB2_00954 | | hypothetical protein | 0.67 | EFB2_02078 | | putative transcriptional regulatory protein YebC | low | > 86 |
| Rhodanobacter sp. FW510-T8 | 0.37 | OKGIIK_11085 | algH | YqgE/AlgH family protein | 0.45 | OKGIIK_01830 | tACO1 | YebC/PmpR family DNA-binding transcriptional regulator | low | > 52 |
| Phaeobacter inhibens DSM 17395 | 0.36 | PGA1_c03130 | | Putative transcriptional regulator | 0.51 | PGA1_c21770 | | DNA-binding regulatory protein, YebC/PmpR family | — | — |
| Rahnella sp. WP5 | 0.35 | EX31_RS02670 | | YqgE/AlgH family protein | 0.68 | EX31_RS11685 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 89 |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_3083 | | protein of unknown function DUF179 (RefSeq) | 0.47 | Dshi_2762 | | protein of unknown function DUF28 (RefSeq) | low | > 64 |
| Shewanella loihica PV-4 | 0.35 | Shew_1144 | | hypothetical protein (RefSeq) | 0.68 | Shew_2078 | | hypothetical protein (RefSeq) | — | — |
| Enterobacter asburiae PDN3 | 0.35 | EX28DRAFT_2986 | | Putative transcriptional regulator | 0.67 | EX28DRAFT_0693 | | DNA-binding regulatory protein, YebC/PmpR family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.35 | MPMX20_03806 | | hypothetical protein | 0.67 | MPMX20_02769 | | putative transcriptional regulatory protein YebC | low | > 85 |
| Acinetobacter radioresistens SK82 | 0.33 | MPMX26_00238 | | hypothetical protein | 0.60 | MPMX26_01851 | | putative transcriptional regulatory protein YebC | low | > 36 |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_03506 | | putative transcriptional regulator | 0.39 | CCNA_03352 | | YebC/PmpR transcriptional regulator | low | > 67 |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_03506 | | putative transcriptional regulator | 0.39 | CCNA_03352 | | YebC/PmpR transcriptional regulator | low | > 66 |
| Sphingomonas koreensis DSMZ 15582 | 0.30 | Ga0059261_4015 | | Putative transcriptional regulator | 0.42 | Ga0059261_0824 | | DNA-binding regulatory protein, YebC/PmpR family | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.29 | A4249_RS00260 | | YqgE/AlgH family protein | 0.37 | A4249_RS15840 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.22 | BT1078 | | putative transcriptional regulator (NCBI ptt file) | 0.29 | BT0627 | | conserved hypothetical protein, with a conserved domain of unknown function (NCBI ptt file) | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.21 | ABZR88_RS10130 | | YqgE/AlgH family protein | 0.28 | ABZR88_RS22270 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Bacteroides ovatus ATCC 8483 | 0.21 | BACOVA_04061 | | putative ACR, COG1678 | 0.29 | BACOVA_02249 | | DNA-binding regulatory protein, YebC/PmpR family | low | > 94 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.21 | Echvi_3442 | | Putative transcriptional regulator | 0.28 | Echvi_1239 | | DNA-binding regulatory protein, YebC/PmpR family | low | > 79 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.20 | CA265_RS07725 | | hypothetical protein | 0.26 | CA265_RS15330 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 88 |
| Bacteroides stercoris CC31F | 0.20 | HMPREF1181_RS16440 | | YqgE/AlgH family protein | 0.28 | HMPREF1181_RS16620 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 56 |
| Mycobacterium tuberculosis H37Rv | 0.16 | Rv0038 | | Conserved protein | 0.43 | Rv2603c | | Highly conserved protein | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.14 | CA264_05580 | | hypothetical protein | 0.41 | CA264_01650 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 74 |
Not shown: 0 genomes with orthologs for Psyr_0485 only; 8 genomes with orthologs for Psyr_1407 only