Conservation of cofitness between Psyr_3208 and Psyr_0034 in Pseudomonas syringae pv. syringae B728a

107 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3208 NADH dehydrogenase subunit M 1.0 Psyr_0034 tryptophan synthase, beta chain 0.44 3
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3208 NADH dehydrogenase subunit M 1.00 Psyr_0034 tryptophan synthase, beta chain
Pseudomonas sp. DMC3 0.88 GFF1501 NADH-quinone oxidoreductase subunit M 0.85 GFF676 Tryptophan synthase beta chain low > 89
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_266 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 0.85 Pf6N2E2_4048 Tryptophan synthase beta chain (EC 4.2.1.20)
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_22015 NADH:ubiquinone oxidoreductase subunit M 0.85 AO356_10915 tryptophan synthase subunit beta
Pseudomonas sp. RS175 0.87 PFR28_02638 NADH-quinone oxidoreductase subunit M 0.85 PFR28_04715 Tryptophan synthase beta chain
Pseudomonas lactucae CFBP13502 0.87 GEMAOFIL_03653 NADH-quinone oxidoreductase subunit M 0.85 GEMAOFIL_00242 Tryptophan synthase beta chain low > 96
Pseudomonas simiae WCS417 0.86 PS417_16630 NADH:ubiquinone oxidoreductase subunit M 0.85 PS417_00185 tryptophan synthase subunit beta
Pseudomonas fluorescens SBW25 0.86 PFLU_RS18670 NADH-quinone oxidoreductase subunit M 0.85 PFLU_RS00180 tryptophan synthase subunit beta low > 109
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_2622 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 0.85 PfGW456L13_566 Tryptophan synthase beta chain (EC 4.2.1.20)
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS18670 NADH-quinone oxidoreductase subunit M 0.85 PFLU_RS00180 tryptophan synthase subunit beta low > 109
Pseudomonas orientalis W4I3 0.86 QF045_RS18395 NADH-quinone oxidoreductase subunit M 0.85 QF045_RS03120 tryptophan synthase subunit beta low > 93
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_27795 NADH:ubiquinone oxidoreductase subunit M 0.86 AO353_10710 tryptophan synthase subunit beta
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_4029 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 0.86 Pf1N1B4_1831 Tryptophan synthase beta chain (EC 4.2.1.20) low > 87
Pseudomonas sp. BP01 0.81 JOY50_RS07020 nuoM NADH-quinone oxidoreductase subunit M 0.90 JOY50_RS21310 trpB tryptophan synthase subunit beta low > 84
Pseudomonas sp. SVBP6 0.81 COO64_RS24325 nuoM NADH-quinone oxidoreductase subunit M 0.91 COO64_RS02275 trpB tryptophan synthase subunit beta low > 93
Pseudomonas putida KT2440 0.81 PP_4130 NADH:ubiquinone oxidoreductase, membrane subunit M 0.90 PP_0083 tryptophan synthase beta chain low > 96
Pseudomonas aeruginosa PA14 0.80 IKLFDK_13295 NADH-quinone oxidoreductase subunit M 0.83 IKLFDK_25375 tryptophan synthase subunit beta low > 98
Pseudomonas aeruginosa MRSN321 0.80 DY961_RS03975 nuoM;go_function=NADH NADH-quinone oxidoreductase subunit M 0.84 DY961_RS26385 trpB;go_function=tryptophan tryptophan synthase subunit beta 0.54 70
Pseudomonas aeruginosa PUPa3 0.80 DQ20_RS35005 nuoM;go_function=NADH NADH-quinone oxidoreductase subunit M 0.84 DQ20_RS58790 trpB;go_function=tryptophan tryptophan synthase subunit beta 0.69 24
Pseudomonas sp. S08-1 0.78 OH686_00100 NADH-ubiquinone oxidoreductase chain M 0.84 OH686_12425 tryptophan synthase, beta subunit low > 80
Pseudomonas segetis P6 0.77 MPMX49_02571 NADH-quinone oxidoreductase subunit M 0.85 MPMX49_00373 Tryptophan synthase beta chain
Serratia liquefaciens MT49 0.73 IAI46_17655 NADH-quinone oxidoreductase subunit M 0.52 IAI46_14040 tryptophan synthase subunit beta low > 87
Rahnella sp. WP5 0.72 EX31_RS19380 NADH-quinone oxidoreductase subunit M 0.52 EX31_RS09975 tryptophan synthase subunit beta low > 89
Klebsiella pneumoniae MKP103 0.72 KDGMDA_27015 NADH-quinone oxidoreductase subunit M 0.51 KDGMDA_19550 tryptophan synthase subunit beta low > 95
Erwinia amylovora T8 0.72 OLJFJH_11465 NADH-quinone oxidoreductase subunit M 0.53 OLJFJH_13475 tryptophan synthase subunit beta low > 58
Klebsiella michiganensis M5al 0.72 BWI76_RS20135 NADH-quinone oxidoreductase subunit M 0.51 BWI76_RS11845 tryptophan synthase subunit beta low > 92
Pectobacterium carotovorum WPP14 0.72 HER17_RS07180 NADH-quinone oxidoreductase subunit M 0.52 HER17_RS10935 tryptophan synthase subunit beta low > 75
Escherichia coli ECRC99 0.71 KEDOAH_05300 nuoM NADH-quinone oxidoreductase subunit M 0.52 KEDOAH_26080 trpB tryptophan synthase subunit beta
Escherichia coli ECOR38 0.71 HEPCGN_22100 nuoM NADH-quinone oxidoreductase subunit M 0.52 HEPCGN_25520 trpB tryptophan synthase subunit beta low > 88
Escherichia coli ECRC62 0.71 BNILDI_13435 nuoM NADH-quinone oxidoreductase subunit M 0.52 BNILDI_18475 trpB tryptophan synthase subunit beta low > 75
Escherichia coli BW25113 0.71 b2277 nuoM NADH dehydrogenase subunit M (NCBI) 0.52 b1261 trpB tryptophan synthase subunit beta (NCBI) low > 76
Escherichia coli ECRC100 0.71 OKFHMN_22895 nuoM NADH-quinone oxidoreductase subunit M 0.52 OKFHMN_02670 trpB tryptophan synthase subunit beta low > 79
Escherichia coli Nissle 1917 0.71 ECOLIN_RS13230 NADH-quinone oxidoreductase subunit M 0.52 ECOLIN_RS07600 tryptophan synthase subunit beta low > 55
Escherichia coli ECOR27 0.71 NOLOHH_14515 nuoM NADH-quinone oxidoreductase subunit M 0.52 NOLOHH_20330 trpB tryptophan synthase subunit beta low > 76
Escherichia coli BL21 0.71 ECD_02202 NADH:ubiquinone oxidoreductase, membrane subunit M 0.52 ECD_01235 tryptophan synthase, beta subunit low > 61
Escherichia coli ECRC102 0.71 NIAGMN_20665 nuoM NADH-quinone oxidoreductase subunit M 0.52 NIAGMN_26840 trpB tryptophan synthase subunit beta
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01429 NADH-quinone oxidoreductase subunit M 0.52 OHPLBJKB_02422 Tryptophan synthase beta chain low > 74
Escherichia coli ECRC98 0.71 JDDGAC_26860 nuoM NADH-quinone oxidoreductase subunit M 0.52 JDDGAC_05215 trpB tryptophan synthase subunit beta low > 87
Escherichia fergusonii Becca 0.71 EFB2_01582 NADH-quinone oxidoreductase subunit M 0.52 EFB2_02665 Tryptophan synthase beta chain low > 86
Escherichia coli ECRC101 0.71 MCAODC_13935 nuoM NADH-quinone oxidoreductase subunit M 0.52 MCAODC_15595 trpB tryptophan synthase subunit beta low > 87
Pantoea sp. MT58 0.71 IAI47_06415 NADH-quinone oxidoreductase subunit M 0.52 IAI47_09170 tryptophan synthase subunit beta low > 76
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13505_RS00390 NADH-quinone oxidoreductase subunit M 0.52 PagCFBP13505_RS07015 tryptophan synthase subunit beta low > 74
Enterobacter asburiae PDN3 0.71 EX28DRAFT_0333 proton-translocating NADH-quinone oxidoreductase, chain M 0.52 EX28DRAFT_0933 tryptophan synthase, beta subunit low > 76
Enterobacter sp. TBS_079 0.71 MPMX20_03207 NADH-quinone oxidoreductase subunit M 0.52 MPMX20_02513 Tryptophan synthase beta chain low > 85
Erwinia tracheiphila SCR3 0.71 LU632_RS08020 nuoM NADH-quinone oxidoreductase subunit M 0.51 LU632_RS12770 trpB tryptophan synthase subunit beta low > 73
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_18100 nuoM NADH-quinone oxidoreductase subunit M 0.51 IJEDHG_23490 trpB tryptophan synthase subunit beta low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF1880 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 0.52 GFF2725 Tryptophan synthase beta chain (EC 4.2.1.20) low > 78
Dickeya dadantii 3937 0.70 DDA3937_RS14280 NADH-quinone oxidoreductase subunit M 0.50 DDA3937_RS10465 tryptophan synthase subunit beta
Dickeya dianthicola ME23 0.70 DZA65_RS14930 NADH-quinone oxidoreductase subunit M 0.50 DZA65_RS10945 tryptophan synthase subunit beta
Dickeya dianthicola 67-19 0.70 HGI48_RS14255 NADH-quinone oxidoreductase subunit M 0.50 HGI48_RS10465 tryptophan synthase subunit beta low > 71
Shewanella oneidensis MR-1 0.67 SO1010 nuoM NADH dehydrogenase I, M subunit (NCBI ptt file) 0.51 SO3023 trpB tryptophan synthase, beta subunit (NCBI ptt file) low > 76
Acinetobacter radioresistens SK82 0.59 MPMX26_02544 NADH-quinone oxidoreductase subunit M 0.62 MPMX26_02617 Tryptophan synthase beta chain
Acinetobacter baumannii LAC-4 0.58 RR41_RS15455 NADH-quinone oxidoreductase subunit M 0.63 RR41_RS03115 tryptophan synthase subunit beta
Pontibacter actiniarum KMM 6156, DSM 19842 0.51 CA264_04215 NADH-quinone oxidoreductase subunit M 0.54 CA264_05080 tryptophan synthase subunit beta low > 74
Azospirillum sp. SherDot2 0.34 MPMX19_01734 NADH-quinone oxidoreductase subunit M 0.72 MPMX19_02736 Tryptophan synthase beta chain
Azospirillum brasilense Sp245 0.34 AZOBR_RS07225 NADH:ubiquinone oxidoreductase subunit M 0.72 AZOBR_RS00525 tryptophan synthase subunit beta
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS06345 NADH-quinone oxidoreductase subunit M 0.64 A4249_RS11330 tryptophan synthase subunit beta
Rhodopseudomonas palustris CGA009 0.33 TX73_022035 NADH-quinone oxidoreductase subunit M 0.70 TX73_000360 tryptophan synthase subunit beta
Rhodanobacter sp000427505 FW510-R12 0.33 LRK53_RS08995 NADH-quinone oxidoreductase subunit M 0.63 LRK53_RS08350 tryptophan synthase subunit beta
Sphingobium sp. HT1-2 0.33 GFF2107 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 0.68 GFF1626 Tryptophan synthase beta chain (EC 4.2.1.20)
Xanthobacter sp. DMC5 0.33 GFF1238 NADH-quinone oxidoreductase subunit M 0.70 GFF3882 Tryptophan synthase beta chain
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_02016 NADH-quinone oxidoreductase chain M 0.69 CCNA_03658 tryptophan synthase beta chain
Caulobacter crescentus NA1000 0.32 CCNA_02016 NADH-quinone oxidoreductase chain M 0.69 CCNA_03658 tryptophan synthase beta chain
Sinorhizobium meliloti 1021 0.32 SMc01926 NADH dehydrogenase subunit M 0.70 SMc02766 tryptophan synthase subunit beta
Methylophilus sp. DMC18 0.32 GFF952 NADH-quinone oxidoreductase subunit M 0.64 GFF656 Tryptophan synthase beta chain
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS02915 NADH-quinone oxidoreductase subunit M 0.65 RALBFv3_RS02585 tryptophan synthase subunit beta
Ralstonia solanacearum UW163 0.32 UW163_RS10810 NADH-quinone oxidoreductase subunit M 0.65 UW163_RS11140 tryptophan synthase subunit beta
Rhodospirillum rubrum S1H 0.32 Rru_A1567 Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) 0.70 Rru_A3427 Tryptophan synthase, beta chain (NCBI)
Ralstonia solanacearum PSI07 0.32 RPSI07_RS14395 NADH-quinone oxidoreductase subunit M 0.65 RPSI07_RS14730 tryptophan synthase subunit beta
Ralstonia solanacearum GMI1000 0.32 RS_RS10285 NADH-quinone oxidoreductase subunit M 0.65 RS_RS09965 tryptophan synthase subunit beta
Rhizobium sp. OAE497 0.32 ABIE40_RS07245 NADH-quinone oxidoreductase subunit M 0.72 ABIE40_RS19335 tryptophan synthase subunit beta
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS24090 NADH-quinone oxidoreductase subunit M 0.64 QEN71_RS17645 tryptophan synthase subunit beta low > 153
Agrobacterium fabrum C58 0.32 Atu1282 NADH dehydrogenase I chain M 0.72 Atu0018 tryptophan synthase beta subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF3693 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 0.60 GFF3355 Tryptophan synthase beta chain (EC 4.2.1.20)
Paraburkholderia graminis OAS925 0.31 ABIE53_001602 NADH-quinone oxidoreductase subunit M 0.64 ABIE53_004809 tryptophan synthase beta chain
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS06685 NADH:ubiquinone oxidoreductase subunit M 0.64 BPHYT_RS33875 tryptophan synthase subunit alpha 0.51 94
Magnetospirillum magneticum AMB-1 0.31 AMB_RS13950 NADH-quinone oxidoreductase subunit M 0.70 AMB_RS20295 tryptophan synthase subunit beta
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_04579 NADH dehydrogenase subunit M 0.64 H281DRAFT_06067 tryptophan synthase, beta chain
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS06055 NADH-quinone oxidoreductase subunit M 0.65 ABZR86_RS08000 tryptophan synthase subunit beta
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS05570 NADH:ubiquinone oxidoreductase subunit M 0.63 RR42_RS14360 tryptophan synthase subunit alpha
Bosea sp. OAE506 0.31 ABIE41_RS17880 NADH-quinone oxidoreductase subunit M 0.72 ABIE41_RS04270 tryptophan synthase subunit beta
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS14820 NADH-quinone oxidoreductase subunit M 0.65 ABZR87_RS14500 tryptophan synthase subunit beta
Dinoroseobacter shibae DFL-12 0.31 Dshi_1328 proton-translocating NADH-quinone oxidoreductase, chain M (RefSeq) 0.69 Dshi_1031 tryptophan synthase, beta subunit (RefSeq)
Phaeobacter inhibens DSM 17395 0.31 PGA1_c10540 NADH-quinone oxidoreductase subunit M 0.68 PGA1_c04870 tryptophan synthase beta chain
Rhodanobacter denitrificans MT42 0.31 LRK55_RS00845 NADH-quinone oxidoreductase subunit M 0.64 LRK55_RS01465 tryptophan synthase subunit beta
Castellaniella sp019104865 MT123 0.31 ABCV34_RS08690 NADH-quinone oxidoreductase subunit M 0.63 ABCV34_RS08435 tryptophan synthase subunit beta
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_05825 nuoM NADH-quinone oxidoreductase subunit M 0.63 OKGIIK_04845 trpB tryptophan synthase subunit beta
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1995.1 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 0.62 Xcc-8004.1964.1 Tryptophan synthase beta chain (EC 4.2.1.20)
Acidovorax sp. GW101-3H11 0.30 Ac3H11_1440 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 0.61 Ac3H11_1534 Tryptophan synthase beta chain (EC 4.2.1.20)
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS01070 NADH-quinone oxidoreductase subunit M 0.64 LRK54_RS01685 tryptophan synthase subunit beta
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_0115 NADH dehydrogenase subunit M (EC 1.6.5.3) 0.48 B158DRAFT_2429 tryptophan synthase, beta subunit low > 40
Dechlorosoma suillum PS 0.30 Dsui_3038 proton-translocating NADH-quinone oxidoreductase, chain M 0.64 Dsui_3192 tryptophan synthase, beta subunit
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_0697 proton-translocating NADH-quinone oxidoreductase, chain M 0.71 Ga0059261_0238 tryptophan synthase, beta subunit
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_1976 ndhD NAD(P)H-quinone oxidoreductase subunit D 0.59 Synpcc7942_2143 trpB tryptophan synthase subunit beta
Variovorax sp. SCN45 0.30 GFF4762 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 0.61 GFF3883 Tryptophan synthase beta chain (EC 4.2.1.20)
Lysobacter sp. OAE881 0.29 ABIE51_RS08370 NADH-quinone oxidoreductase subunit M 0.63 ABIE51_RS08260 tryptophan synthase subunit beta
Variovorax sp. OAS795 0.29 ABID97_RS20435 NADH-quinone oxidoreductase subunit M 0.61 ABID97_RS08430 tryptophan synthase subunit beta
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS08880 NADH:ubiquinone oxidoreductase subunit M 0.60 HSERO_RS16475 tryptophan synthase subunit alpha
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS15725 NuoM family protein 0.54 ABZR88_RS10665 tryptophan synthase subunit beta
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS23595 NADH-quinone oxidoreductase subunit M 0.53 CA265_RS05020 tryptophan synthase subunit beta
Synechocystis sp000284455 PCC 6803 0.27 SGL_RS12625 NAD(P)H-quinone oxidoreductase subunit 4 0.60 SGL_RS16740 tryptophan synthase subunit beta
Mycobacterium tuberculosis H37Rv 0.25 Rv3157 Probable NADH dehydrogenase I (chain M) NUOK (NADH-ubiquinone oxidoreductase chain M) 0.56 Rv1612 Tryptophan synthase, beta subunit TrpB
Bacteroides ovatus ATCC 8483 0.22 BACOVA_04854 proton-translocating NADH-quinone oxidoreductase, chain M 0.50 BACOVA_03779 tryptophan synthase, beta subunit low > 96
Bacteroides thetaiotaomicron VPI-5482 0.22 BT4059 NADH dehydrogenase I, chain M (NCBI ptt file) 0.51 BT0533 tryptophan synthase beta chain (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS13295 NADH-quinone oxidoreductase subunit M 0.49 HMPREF1058_RS07170 tryptophan synthase subunit beta low > 67
Phocaeicola dorei CL03T12C01 0.21 ABI39_RS08500 NADH-quinone oxidoreductase subunit M 0.49 ABI39_RS21045 tryptophan synthase subunit beta low > 72
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS09040 NADH-quinone oxidoreductase subunit M 0.51 HMPREF1181_RS15320 tryptophan synthase subunit beta low > 56

Not shown: 0 genomes with orthologs for Psyr_3208 only; 14 genomes with orthologs for Psyr_0034 only