| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_0674 | | ADP/ATP ratio sensor and inhibitor of translation | 1.0 | PP_4880 | | exoribonuclease R | 0.41 | 8 |
| Pseudomonas fluorescens FW300-N2E2 | 0.98 | Pf6N2E2_5084 | | Glutathione-regulated potassium-efflux system ATP-binding protein | 0.82 | Pf6N2E2_3607 | | 3'-to-5' exoribonuclease RNase R | low | > 103 |
| Pseudomonas sp. RS175 | 0.98 | PFR28_03784 | | Energy-dependent translational throttle protein EttA | 0.83 | PFR28_05130 | | Ribonuclease R | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.97 | AO356_15735 | | ABC transporter ATP-binding protein | 0.82 | AO356_08610 | | exoribonuclease R | low | > 104 |
| Pseudomonas simiae WCS417 | 0.96 | PS417_24265 | | ABC transporter ATP-binding protein | 0.81 | PS417_02555 | | exoribonuclease R | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.96 | AO353_14030 | | ABC transporter ATP-binding protein | 0.83 | AO353_13200 | | exoribonuclease R | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.96 | PfGW456L13_1453 | | Glutathione-regulated potassium-efflux system ATP-binding protein | 0.83 | PfGW456L13_144 | | 3'-to-5' exoribonuclease RNase R | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.96 | PFLU_RS26180 | | energy-dependent translational throttle protein EttA | 0.81 | PFLU_RS02625 | | ribonuclease R | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.96 | PFLU_RS26180 | | energy-dependent translational throttle protein EttA | 0.81 | PFLU_RS02625 | | ribonuclease R | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.96 | Psyr_4264 | | ABC transporter | 0.81 | Psyr_0579 | | RNAse R | 0.33 | 78 |
| Pseudomonas syringae pv. syringae B728a | 0.96 | Psyr_4264 | | ABC transporter | 0.81 | Psyr_0579 | | RNAse R | low | > 86 |
| Pseudomonas sp. S08-1 | 0.94 | OH686_16240 | | Energy-dependent translational throttle protein EttA | 0.78 | OH686_15910 | | ribonuclease R | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.94 | Psest_3433 | | ATP-binding cassette protein, ChvD family | 0.75 | Psest_0691 | | ribonuclease R | low | > 67 |
| Marinobacter adhaerens HP15 | 0.77 | HP15_488 | | ABC transporter ATP-binding protein-like protein | 0.47 | HP15_622 | | exoribonuclease R | low | > 73 |
| Escherichia fergusonii Becca | 0.76 | EFB2_04053 | | Energy-dependent translational throttle protein EttA | 0.45 | EFB2_04356 | | Ribonuclease R | low | > 86 |
| Escherichia coli BW25113 | 0.76 | b4391 | yjjK | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | 0.45 | b4179 | vacB | putative enzyme (VIMSS) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.76 | OHPLBJKB_03670 | | Energy-dependent translational throttle protein EttA | 0.45 | OHPLBJKB_03863 | | Ribonuclease R | low | > 73 |
| Escherichia coli BL21 | 0.76 | ECD_04267 | | energy-dependent translational throttle A | 0.45 | ECD_04046 | | exoribonuclease R, RNase R | low | > 61 |
| Escherichia coli Nissle 1917 | 0.76 | ECOLIN_RS25205 | | energy-dependent translational throttle protein EttA | 0.45 | ECOLIN_RS24265 | | ribonuclease R | 0.62 | 44 |
| Dickeya dadantii 3937 | 0.75 | DDA3937_RS18460 | | energy-dependent translational throttle protein EttA | 0.45 | DDA3937_RS17260 | | ribonuclease R | low | > 74 |
| Escherichia coli ECRC102 | 0.75 | NIAGMN_09025 | ettA | energy-dependent translational throttle protein EttA | 0.45 | NIAGMN_10070 | rnr | ribonuclease R | — | — |
| Escherichia coli ECRC98 | 0.75 | JDDGAC_14770 | ettA | energy-dependent translational throttle protein EttA | 0.45 | JDDGAC_15860 | rnr | ribonuclease R | 0.92 | 34 |
| Paraburkholderia graminis OAS925 | 0.75 | ABIE53_003656 | | sulfate-transporting ATPase | 0.41 | ABIE53_001940 | | ribonuclease R | low | > 113 |
| Escherichia coli ECRC99 | 0.75 | KEDOAH_16980 | ettA | energy-dependent translational throttle protein EttA | 0.45 | KEDOAH_15935 | rnr | ribonuclease R | — | — |
| Escherichia coli ECRC62 | 0.75 | BNILDI_08090 | ettA | energy-dependent translational throttle protein EttA | 0.45 | BNILDI_07005 | rnr | ribonuclease R | low | > 75 |
| Ralstonia solanacearum GMI1000 | 0.75 | RS_RS14590 | | energy-dependent translational throttle protein EttA | 0.42 | RS_RS06155 | | ribonuclease R | low | > 80 |
| Escherichia coli ECRC100 | 0.75 | OKFHMN_11175 | ettA | energy-dependent translational throttle protein EttA | 0.45 | OKFHMN_12220 | rnr | ribonuclease R | 0.90 | 1 |
| Escherichia coli ECRC101 | 0.75 | MCAODC_01690 | ettA | energy-dependent translational throttle protein EttA | 0.45 | MCAODC_02735 | rnr | ribonuclease R | 0.74 | 36 |
| Pectobacterium carotovorum WPP14 | 0.75 | HER17_RS02745 | | energy-dependent translational throttle protein EttA | 0.45 | HER17_RS03835 | | ribonuclease R | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF1059 | | ABC transporter, ATP-binding protein | 0.45 | GFF832 | | '3'-to-5' exoribonuclease RNase R' transl_table=11 | 0.93 | 8 |
| Dickeya dianthicola ME23 | 0.75 | DZA65_RS19530 | | energy-dependent translational throttle protein EttA | 0.45 | DZA65_RS18405 | | ribonuclease R | low | > 75 |
| Escherichia coli ECOR27 | 0.75 | NOLOHH_03505 | ettA | energy-dependent translational throttle protein EttA | 0.45 | NOLOHH_04485 | rnr | ribonuclease R | low | > 75 |
| Escherichia coli ECOR38 | 0.75 | HEPCGN_09180 | ettA | energy-dependent translational throttle protein EttA | 0.45 | HEPCGN_10450 | rnr | ribonuclease R | low | > 87 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.75 | H281DRAFT_05699 | | sulfate-transporting ATPase | 0.41 | H281DRAFT_00712 | | RNAse R | low | > 103 |
| Ralstonia solanacearum UW163 | 0.75 | UW163_RS06985 | | energy-dependent translational throttle protein EttA | 0.41 | UW163_RS12810 | | ribonuclease R | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.75 | RALBFv3_RS06640 | | energy-dependent translational throttle protein EttA | 0.41 | RALBFv3_RS15345 | | ribonuclease R | low | > 76 |
| Dickeya dianthicola 67-19 | 0.75 | HGI48_RS18390 | | energy-dependent translational throttle protein EttA | 0.45 | HGI48_RS17315 | | ribonuclease R | low | > 71 |
| Burkholderia phytofirmans PsJN | 0.75 | BPHYT_RS17480 | | ABC transporter ATP-binding protein | 0.41 | BPHYT_RS08455 | | ribonuclease R | low | > 109 |
| Enterobacter sp. TBS_079 | 0.75 | MPMX20_00698 | | Energy-dependent translational throttle protein EttA | 0.45 | MPMX20_00460 | | Ribonuclease R | low | > 85 |
| Paraburkholderia sabiae LMG 24235 | 0.75 | QEN71_RS27625 | | energy-dependent translational throttle protein EttA | 0.41 | QEN71_RS22925 | | ribonuclease R | low | > 153 |
| Enterobacter asburiae PDN3 | 0.75 | EX28DRAFT_3601 | | ATP-binding cassette protein, ChvD family | 0.45 | EX28DRAFT_3376 | | ribonuclease R | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.75 | RPSI07_RS10585 | | energy-dependent translational throttle protein EttA | 0.42 | RPSI07_RS18030 | | ribonuclease R | low | > 81 |
| Rahnella sp. WP5 | 0.75 | EX31_RS04000 | | energy-dependent translational throttle protein EttA | 0.46 | EX31_RS08785 | | ribonuclease R | low | > 89 |
| Ralstonia sp. UNC404CL21Col | 0.75 | ABZR87_RS02310 | | energy-dependent translational throttle protein EttA | 0.41 | ABZR87_RS10985 | | ribonuclease R | low | > 80 |
| Klebsiella michiganensis M5al | 0.74 | BWI76_RS04175 | | energy-dependent translational throttle protein EttA | 0.45 | BWI76_RS02575 | | exoribonuclease R | low | > 92 |
| Serratia liquefaciens MT49 | 0.74 | IAI46_02965 | | energy-dependent translational throttle protein EttA | 0.45 | IAI46_01660 | | ribonuclease R | low | > 86 |
| Pantoea sp. MT58 | 0.74 | IAI47_16325 | | energy-dependent translational throttle protein EttA | 0.46 | IAI47_02625 | | ribonuclease R | low | > 76 |
| Shewanella oneidensis MR-1 | 0.74 | SO3472 | | ABC transporter, ATP-binding protein (NCBI ptt file) | 0.44 | SO3935 | vacB | ribonuclease R (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.74 | Shewana3_1093 | | putative ABC transporter ATP-binding protein (RefSeq) | 0.45 | Shewana3_0697 | | RNAse R (RefSeq) | low | > 73 |
| Rhodanobacter sp. FW510-T8 | 0.74 | OKGIIK_11445 | ettA | energy-dependent translational throttle protein EttA | 0.39 | OKGIIK_06755 | rnr | ribonuclease R | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.74 | ABZR86_RS10725 | | energy-dependent translational throttle protein EttA | 0.39 | ABZR86_RS08270 | | ribonuclease R | — | — |
| Shewanella loihica PV-4 | 0.74 | Shew_1183 | | putative ABC transporter ATP-binding protein (RefSeq) | 0.45 | Shew_3289 | | ribonuclease R (RefSeq) | 0.41 | 43 |
| Dechlorosoma suillum PS | 0.73 | Dsui_2746 | | ATP-binding cassette protein, ChvD family | 0.44 | Dsui_3128 | | ribonuclease R | low | > 51 |
| Erwinia tracheiphila SCR3 | 0.73 | LU632_RS02565 | ettA | energy-dependent translational throttle protein EttA | 0.46 | LU632_RS21750 | rnr | ribonuclease R | 0.38 | 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.73 | CSW01_03650 | | energy-dependent translational throttle protein EttA | 0.45 | CSW01_13155 | | ribonuclease R | low | > 62 |
| Herbaspirillum seropedicae SmR1 | 0.73 | HSERO_RS23550 | | ABC transporter ATP-binding protein | 0.41 | HSERO_RS09290 | | ribonuclease R | low | > 78 |
| Shewanella amazonensis SB2B | 0.73 | Sama_1013 | | putative ABC transporter ATP-binding protein (RefSeq) | 0.43 | Sama_3067 | | exoribonuclease II (RefSeq) | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.73 | LRK55_RS04405 | | energy-dependent translational throttle protein EttA | 0.39 | LRK55_RS00235 | | ribonuclease R | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.73 | LRK54_RS04630 | | energy-dependent translational throttle protein EttA | 0.39 | LRK54_RS00495 | | ribonuclease R | low | > 59 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.73 | GFF3531 | | ABC transporter | 0.35 | GFF4921 | | 3'-to-5' exoribonuclease RNase R | low | > 90 |
| Cupriavidus basilensis FW507-4G11 | 0.72 | RR42_RS18575 | | ABC transporter ATP-binding protein | 0.43 | RR42_RS13065 | | ribonuclease R | low | > 128 |
| Kangiella aquimarina DSM 16071 | 0.71 | B158DRAFT_0881 | | ATP-binding cassette protein, ChvD family | 0.45 | B158DRAFT_1989 | | ribonuclease R | 0.74 | 24 |
| Alteromonas macleodii MIT1002 | 0.71 | MIT1002_02704 | | putative ABC transporter ATP-binding protein | 0.45 | MIT1002_03606 | | Ribonuclease R | low | > 70 |
| Castellaniella sp019104865 MT123 | 0.71 | ABCV34_RS08155 | | energy-dependent translational throttle protein EttA | 0.38 | ABCV34_RS06625 | | ribonuclease R | low | > 48 |
| Lysobacter sp. OAE881 | 0.71 | ABIE51_RS04610 | | energy-dependent translational throttle protein EttA | 0.38 | ABIE51_RS07475 | | ribonuclease R | — | — |
| Acidovorax sp. GW101-3H11 | 0.70 | Ac3H11_387 | | ABC transporter ATP-binding protein | 0.38 | Ac3H11_412 | | 3'-to-5' exoribonuclease RNase R | — | — |
| Variovorax sp. SCN45 | 0.70 | GFF6780 | | Energy-dependent translational throttle protein EttA | 0.37 | GFF399 | | 3'-to-5' exoribonuclease RNase R | low | > 127 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.69 | Xcc-8004.4400.1 | | ABC transporter, ATP-binding protein | 0.38 | Xcc-8004.3370.1 | | 3'-to-5' exoribonuclease RNase R | — | — |
| Acinetobacter radioresistens SK82 | 0.68 | MPMX26_02832 | | Energy-dependent translational throttle protein EttA | 0.35 | MPMX26_02684 | | Ribonuclease R | low | > 36 |
| Rhodospirillum rubrum S1H | 0.62 | Rru_A1527 | | ABC transporter component (NCBI) | 0.23 | Rru_A3203 | | ribonuclease R (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.60 | AMB_RS04455 | | energy-dependent translational throttle protein EttA | 0.23 | AMB_RS04465 | | ribonuclease R | low | > 64 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.59 | Echvi_0034 | | ATP-binding cassette protein, ChvD family | 0.21 | Echvi_0669 | | ribonuclease R | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.59 | DVU2586 | | ABC transporter, ATP-binding protein (TIGR) | 0.23 | DVU2467 | rnr | ribonuclease R (TIGR) | low | > 55 |
| Azospirillum sp. SherDot2 | 0.58 | MPMX19_00626 | | Energy-dependent translational throttle protein EttA | 0.22 | MPMX19_01812 | | Ribonuclease R | low | > 112 |
| Azospirillum brasilense Sp245 | 0.58 | AZOBR_RS09515 | | heme ABC transporter ATP-binding protein | 0.24 | AZOBR_RS16165 | | ribonuclease R | low | > 97 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.58 | CA264_18150 | | energy-dependent translational throttle protein EttA | 0.21 | CA264_17355 | | ribonuclease R | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.58 | CA265_RS14910 | | ABC transporter ATP-binding protein | 0.20 | CA265_RS10530 | | ribonuclease R | low | > 88 |
| Dinoroseobacter shibae DFL-12 | 0.58 | Dshi_2197 | | ABC transporter related (RefSeq) | 0.17 | Dshi_0015 | | ribonuclease R (RefSeq) | low | > 64 |
| Parabacteroides merdae CL09T00C40 | 0.57 | HMPREF1078_RS07420 | | energy-dependent translational throttle protein EttA | 0.21 | HMPREF1078_RS05885 | | ribonuclease R | low | > 61 |
| Phaeobacter inhibens DSM 17395 | 0.57 | PGA1_c26300 | | ABC transporter, ATP-binding protein | 0.20 | PGA1_c36430 | | putative ribonuclease R | low | > 62 |
| Sphingomonas koreensis DSMZ 15582 | 0.57 | Ga0059261_0048 | | ATP-binding cassette protein, ChvD family | 0.19 | Ga0059261_3266 | | ribonuclease R | — | — |
| Rhodopseudomonas palustris CGA009 | 0.56 | TX73_018705 | | energy-dependent translational throttle protein EttA | 0.21 | TX73_016160 | | ribonuclease R | low | > 86 |
| Caulobacter crescentus NA1000 | 0.56 | CCNA_02231 | | ABC transporter ATP-binding protein | 0.21 | CCNA_02537 | | ribonuclease R | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.56 | CCNA_02231 | | ABC transporter ATP-binding protein | 0.21 | CCNA_02537 | | ribonuclease R | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.56 | A4249_RS07905 | | energy-dependent translational throttle protein EttA | 0.20 | A4249_RS08325 | | ribonuclease R | — | — |
| Sinorhizobium meliloti 1021 | 0.54 | SMc04454 | | ABC transporter ATP-binding protein | 0.23 | SMc01365 | | exoribonuclease II protein | low | > 103 |
| Bosea sp. OAE506 | 0.53 | ABIE41_RS12400 | | energy-dependent translational throttle protein EttA | 0.19 | ABIE41_RS18140 | | ribonuclease R | low | > 77 |
| Agrobacterium fabrum C58 | 0.53 | Atu2125 | | ABC transporter, nucleotide binding/ATPase protein | 0.23 | Atu1303 | | exoribonuclease | low | > 89 |
| Rhizobium sp. OAE497 | 0.52 | ABIE40_RS11960 | | energy-dependent translational throttle protein EttA | 0.23 | ABIE40_RS07350 | | ribonuclease R | low | > 107 |
| Synechococcus elongatus PCC 7942 | 0.30 | Synpcc7942_1381 | | ATPase | 0.14 | Synpcc7942_1911 | zam | Cold shock protein | low | > 38 |