Conservation of cofitness between PP_4724 and PP_0417 in Pseudomonas putida KT2440

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4724 Carbamoyl-phosphate synthase small chain 1.0 PP_0417 Anthranilate synthase component 1 0.54 14
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_05635 carbamoyl phosphate synthase small subunit 0.90 AO353_07230 anthranilate synthase
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.90 Pf1N1B4_2545 Anthranilate synthase, aminase component (EC 4.1.3.27)
Pseudomonas simiae WCS417 0.93 PS417_24045 carbamoyl phosphate synthase small subunit 0.89 PS417_25725 anthranilate synthase component I
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.91 Pf6N2E2_4822 Anthranilate synthase, aminase component (EC 4.1.3.27)
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_07485 carbamoyl phosphate synthase small subunit 0.90 AO356_14420 anthranilate synthase
Pseudomonas sp. RS175 0.92 PFR28_00076 Carbamoyl-phosphate synthase small chain 0.90 PFR28_04047 Anthranilate synthase component 1
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.88 PfGW456L13_1217 Anthranilate synthase, aminase component (EC 4.1.3.27)
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.89 PFLU_RS27380 anthranilate synthase component I
Pseudomonas fluorescens SBW25 0.92 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.89 PFLU_RS27380 anthranilate synthase component I
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.87 Psyr_4609 anthranilate synthase, component I
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.87 Psyr_4609 anthranilate synthase, component I
Pseudomonas sp. S08-1 0.88 OH686_17075 Carbamoyl-phosphate synthase small chain 0.85 OH686_15125 anthranilate synthase component I
Pseudomonas stutzeri RCH2 0.87 Psest_0967 carbamoyl-phosphate synthase, small subunit 0.84 Psest_3650 anthranilate synthase component I, non-proteobacterial lineages
Marinobacter adhaerens HP15 0.75 HP15_3078 carbamoyl-phosphate synthase small chain 0.65 HP15_3288 anthranilate synthase component I 0.36 21
Shewanella oneidensis MR-1 0.72 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) 0.26 SO3019 trpE anthranilate synthase component I (NCBI ptt file) 0.90 19
Escherichia coli Nissle 1917 0.71 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.25 ECOLIN_RS07615 anthranilate synthase component I
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain 0.25 OHPLBJKB_02419 Anthranilate synthase component 1 low > 73
Escherichia coli BW25113 0.71 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.25 b1264 trpE anthranilate synthase component I (NCBI) 0.80 68
Escherichia coli BL21 0.71 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 0.25 ECD_01238 component I of anthranilate synthase low > 60
Escherichia coli ECRC98 0.71 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit 0.25 JDDGAC_05200 trpE anthranilate synthase component I
Escherichia coli ECRC99 0.71 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit 0.25 KEDOAH_26095 trpE anthranilate synthase component I
Escherichia coli ECRC102 0.71 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit 0.25 NIAGMN_26825 trpE anthranilate synthase component I
Escherichia coli ECRC101 0.71 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit 0.25 OKFHMN_02655 trpE anthranilate synthase component I
Escherichia coli ECOR27 0.71 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit 0.25 NOLOHH_20315 trpE anthranilate synthase component I low > 57
Escherichia coli ECRC101 0.71 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.25 MCAODC_15610 trpE anthranilate synthase component I
Shewanella loihica PV-4 0.71 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) 0.25 Shew_2251 anthranilate synthase component I (RefSeq) 0.94 7
Escherichia coli ECOR38 0.71 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit 0.25 HEPCGN_25535 trpE anthranilate synthase component I low > 85
Shewanella sp. ANA-3 0.70 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) 0.26 Shewana3_1520 anthranilate synthase component I (RefSeq) 0.97 3
Lysobacter sp. OAE881 0.70 ABIE51_RS11625 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.53 ABIE51_RS04150 anthranilate synthase component I 0.68 7
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.56 Xcc-8004.608.1 Anthranilate synthase, aminase component (EC 4.1.3.27)
Acinetobacter radioresistens SK82 0.70 MPMX26_00767 Carbamoyl-phosphate synthase small chain 0.50 MPMX26_00199 Anthranilate synthase component 1 low > 36
Dechlorosoma suillum PS 0.69 Dsui_3065 carbamoyl-phosphate synthase, small subunit 0.59 Dsui_0219 anthranilate synthase component I
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS13520 carbamoyl phosphate synthase small subunit 0.53 RR42_RS18295 anthranilate synthase component I
Ralstonia solanacearum PSI07 0.69 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit 0.53 RPSI07_RS10755 anthranilate synthase component I
Ralstonia solanacearum UW163 0.68 UW163_RS15510 carbamoyl-phosphate synthase small subunit 0.53 UW163_RS07140 anthranilate synthase component I
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit 0.53 RALBFv3_RS06485 anthranilate synthase component I
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.53 ABZR87_RS02140 anthranilate synthase component I
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.54 QEN71_RS27550 anthranilate synthase component I
Ralstonia solanacearum GMI1000 0.68 RS_RS07620 carbamoyl-phosphate synthase small subunit 0.53 RS_RS14430 anthranilate synthase component I
Herbaspirillum seropedicae SmR1 0.68 HSERO_RS06920 carbamoyl phosphate synthase small subunit 0.54 HSERO_RS19435 anthranilate synthase subunit I
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS17995 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.56 LRK54_RS11415 anthranilate synthase component I
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS14195 carbamoyl phosphate synthase small subunit 0.53 BPHYT_RS17390 anthranilate synthase subunit I 0.58 45
Rhodanobacter denitrificans MT42 0.66 LRK55_RS17850 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.56 LRK55_RS11145 anthranilate synthase component I
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.54 ABZR86_RS12180 anthranilate synthase component I
Acidovorax sp. GW101-3H11 0.66 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.54 Ac3H11_767 Anthranilate synthase, aminase component (EC 4.1.3.27)
Variovorax sp. OAS795 0.66 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.52 ABID97_RS05250 anthranilate synthase component I
Paraburkholderia graminis OAS925 0.66 ABIE53_003005 carbamoyl-phosphate synthase small subunit 0.53 ABIE53_003640 anthranilate synthase component 1
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_07300 carbamoyl phosphate synthase small subunit 0.54 OKGIIK_12405 trpE anthranilate synthase component I low > 52
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit 0.53 H281DRAFT_05715 anthranilate synthase, component I
Variovorax sp. SCN45 0.66 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.52 GFF5896 Anthranilate synthase, aminase component (EC 4.1.3.27)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.53 GFF3106 Anthranilate synthase, aminase component (EC 4.1.3.27)
Castellaniella sp019104865 MT123 0.62 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.51 ABCV34_RS10280 anthranilate synthase component I
Phaeobacter inhibens DSM 17395 0.52 PGA1_c06670 carbamoyl-phosphate synthase small chain 0.39 PGA1_c16860 anthranilate synthase component 1
Azospirillum sp. SherDot2 0.52 MPMX19_00757 Carbamoyl-phosphate synthase small chain 0.41 MPMX19_00893 Anthranilate synthase component 1
Azospirillum brasilense Sp245 0.51 AZOBR_RS10920 carbamoyl phosphate synthase small subunit 0.41 AZOBR_RS07490 anthranilate synthase subunit I
Rhodospirillum rubrum S1H 0.50 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI) 0.41 Rru_A1891 Anthranilate synthase component I (NCBI) 0.57 53
Magnetospirillum magneticum AMB-1 0.50 AMB_RS03600 carbamoyl-phosphate synthase small subunit 0.41 AMB_RS09175 anthranilate synthase component I
Brevundimonas sp. GW460-12-10-14-LB2 0.50 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.37 A4249_RS06155 anthranilate synthase component I
Dinoroseobacter shibae DFL-12 0.49 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq) 0.41 Dshi_1796 anthranilate synthase component I (RefSeq)
Bosea sp. OAE506 0.47 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.39 ABIE41_RS15730 anthranilate synthase component I
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit 0.36 Ga0059261_0256 anthranilate synthase component I, non-proteobacterial lineages
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_02925 carbamoyl-phosphate synthase small chain 0.37 CCNA_01972 anthranilate synthase component I low > 67
Caulobacter crescentus NA1000 0.47 CCNA_02925 carbamoyl-phosphate synthase small chain 0.37 CCNA_01972 anthranilate synthase component I
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_2122 carA carbamoyl phosphate synthase small subunit 0.39 Synpcc7942_1003 trpE anthranilate synthase, component I
Bifidobacterium breve UCC2003 0.39 BBR_RS13630 carbamoyl-phosphate synthase small subunit 0.38 BBR_RS16085 anthranilate synthase component I low > 34
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS15240 carbamoyl phosphate synthase small subunit 0.27 CA265_RS22890 anthranilate synthase component I
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_0226 carbamoyl-phosphate synthase, small subunit 0.25 Echvi_2504 Anthranilate/para-aminobenzoate synthases component I
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_2370 carbamoyl phosphate synthase small subunit (RefSeq) 0.29 DvMF_1746 Anthranilate synthase (RefSeq) 0.68 30
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_19490 carbamoyl phosphate synthase small subunit 0.25 CA264_05055 anthranilate synthase component I low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.38 DVU3113 carA carbamoyl-phosphate synthase, small subunit (TIGR) 0.28 DVU0465 trpE anthranilate synthase, component I (TIGR)
Mycobacterium tuberculosis H37Rv 0.38 Rv1383 Probable carbamoyl-phosphate synthase small chain CarA (carbamoyl-phosphate synthetase glutamine chain) 0.37 Rv1609 Anthranilate synthase component I TrpE (glutamine amidotransferase)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS17830 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.27 ABZR88_RS16595 anthranilate synthase component I family protein
Methanococcus maripaludis JJ 0.37 MMJJ_RS06195 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.27 MMJJ_RS09175 anthranilate synthase component I
Methanococcus maripaludis S2 0.36 MMP_RS08170 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.27 MMP_RS05205 anthranilate synthase component I
Bacteroides thetaiotaomicron VPI-5482 0.33 BT0556 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) 0.25 BT0532 anthranilate synthase component I (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.33 BACOVA_03753 carbamoyl-phosphate synthase, small subunit 0.26 BACOVA_03780 chorismate binding enzyme low > 94
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS06875 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.27 HMPREF1058_RS07175 anthranilate synthase component I family protein low > 67
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS20670 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.26 ABI39_RS21050 anthranilate synthase component I family protein low > 72
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS01295 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.25 HMPREF1078_RS00145 anthranilate synthase component I family protein low > 61
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS16070 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.26 HMPREF1181_RS15325 anthranilate synthase component I family protein low > 56

Not shown: 23 genomes with orthologs for PP_4724 only; 0 genomes with orthologs for PP_0417 only