Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas putida KT2440 | 1.0 | PP_1988 | | 3-isopropylmalate dehydrogenase | 1.0 | PP_0417 | | Anthranilate synthase component 1 | 0.91 | 9 |
Pseudomonas fluorescens FW300-N2E2 | 0.94 | Pf6N2E2_66 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.91 | Pf6N2E2_4822 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.94 | AO356_21415 | | 3-isopropylmalate dehydrogenase | 0.90 | AO356_14420 | | anthranilate synthase | 0.93 | 13 |
Pseudomonas fluorescens GW456-L13 | 0.93 | PfGW456L13_3945 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.88 | PfGW456L13_1217 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.89 | 28 |
Pseudomonas simiae WCS417 | 0.93 | PS417_18585 | | 3-isopropylmalate dehydrogenase | 0.89 | PS417_25725 | | anthranilate synthase component I | 0.91 | 10 |
Pseudomonas fluorescens SBW25-INTG | 0.93 | PFLU_RS20565 | | 3-isopropylmalate dehydrogenase | 0.89 | PFLU_RS27380 | | anthranilate synthase component I | 0.44 | 32 |
Pseudomonas fluorescens SBW25 | 0.93 | PFLU_RS20565 | | 3-isopropylmalate dehydrogenase | 0.89 | PFLU_RS27380 | | anthranilate synthase component I | 0.50 | 53 |
Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_12 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.90 | Pf1N1B4_2545 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.90 | 8 |
Pseudomonas sp. RS175 | 0.93 | PFR28_02821 | | 3-isopropylmalate dehydrogenase | 0.90 | PFR28_04047 | | Anthranilate synthase component 1 | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_20635 | | 3-isopropylmalate dehydrogenase | 0.90 | AO353_07230 | | anthranilate synthase | 0.95 | 9 |
Pseudomonas syringae pv. syringae B728a | 0.91 | Psyr_1985 | | 3-isopropylmalate dehydrogenase | 0.87 | Psyr_4609 | | anthranilate synthase, component I | 0.93 | 8 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.91 | Psyr_1985 | | 3-isopropylmalate dehydrogenase | 0.87 | Psyr_4609 | | anthranilate synthase, component I | 0.94 | 10 |
Pseudomonas stutzeri RCH2 | 0.87 | Psest_2589 | | 3-isopropylmalate dehydrogenase | 0.84 | Psest_3650 | | anthranilate synthase component I, non-proteobacterial lineages | 0.84 | 19 |
Pseudomonas sp. S08-1 | 0.87 | OH686_04470 | | 3-isopropylmalate dehydrogenase | 0.85 | OH686_15125 | | anthranilate synthase component I | 0.78 | 25 |
Xanthomonas campestris pv. campestris strain 8004 | 0.81 | Xcc-8004.1053.1 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.56 | Xcc-8004.608.1 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.95 | 5 |
Acinetobacter radioresistens SK82 | 0.73 | MPMX26_00348 | | 3-isopropylmalate dehydrogenase | 0.50 | MPMX26_00199 | | Anthranilate synthase component 1 | 0.94 | 9 |
Marinobacter adhaerens HP15 | 0.73 | HP15_1832 | | 3-isopropylmalate dehydrogenase | 0.65 | HP15_3288 | | anthranilate synthase component I | 0.88 | 13 |
Dechlorosoma suillum PS | 0.68 | Dsui_3198 | | 3-isopropylmalate dehydrogenase | 0.59 | Dsui_0219 | | anthranilate synthase component I | — | — |
Ralstonia sp. UNC404CL21Col | 0.65 | ABZR87_RS14530 | | 3-isopropylmalate dehydrogenase | 0.53 | ABZR87_RS02140 | | anthranilate synthase component I | 0.92 | 8 |
Paraburkholderia bryophila 376MFSha3.1 | 0.65 | H281DRAFT_06072 | | 3-isopropylmalate dehydrogenase | 0.53 | H281DRAFT_05715 | | anthranilate synthase, component I | 0.73 | 5 |
Paraburkholderia graminis OAS925 | 0.65 | ABIE53_004804 | | 3-isopropylmalate dehydrogenase | 0.53 | ABIE53_003640 | | anthranilate synthase component 1 | 0.75 | 22 |
Herbaspirillum seropedicae SmR1 | 0.65 | HSERO_RS16500 | | 3-isopropylmalate dehydrogenase | 0.54 | HSERO_RS19435 | | anthranilate synthase subunit I | 0.92 | 11 |
Cupriavidus basilensis FW507-4G11 | 0.64 | RR42_RS14385 | | 3-isopropylmalate dehydrogenase | 0.53 | RR42_RS18295 | | anthranilate synthase component I | 0.77 | 21 |
Variovorax sp. OAS795 | 0.64 | ABID97_RS08455 | | 3-isopropylmalate dehydrogenase | 0.52 | ABID97_RS05250 | | anthranilate synthase component I | — | — |
Ralstonia solanacearum GMI1000 | 0.64 | RS_RS09990 | | 3-isopropylmalate dehydrogenase | 0.53 | RS_RS14430 | | anthranilate synthase component I | low | > 80 |
Ralstonia solanacearum IBSBF1503 | 0.64 | RALBFv3_RS02610 | | 3-isopropylmalate dehydrogenase | 0.53 | RALBFv3_RS06485 | | anthranilate synthase component I | low | > 76 |
Ralstonia solanacearum UW163 | 0.64 | UW163_RS11115 | | 3-isopropylmalate dehydrogenase | 0.53 | UW163_RS07140 | | anthranilate synthase component I | — | — |
Variovorax sp. SCN45 | 0.64 | GFF3888 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.52 | GFF5896 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.44 | 94 |
Burkholderia phytofirmans PsJN | 0.64 | BPHYT_RS33900 | | 3-isopropylmalate dehydrogenase | 0.53 | BPHYT_RS17390 | | anthranilate synthase subunit I | 0.95 | 5 |
Acidovorax sp. GW101-3H11 | 0.64 | Ac3H11_1528 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.54 | Ac3H11_767 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.92 | 10 |
Paraburkholderia sabiae LMG 24235 | 0.63 | QEN71_RS17620 | | 3-isopropylmalate dehydrogenase | 0.54 | QEN71_RS27550 | | anthranilate synthase component I | 0.70 | 43 |
Ralstonia solanacearum PSI07 | 0.63 | RPSI07_RS14705 | | 3-isopropylmalate dehydrogenase | 0.53 | RPSI07_RS10755 | | anthranilate synthase component I | — | — |
Castellaniella sp019104865 MT123 | 0.63 | ABCV34_RS04280 | | 3-isopropylmalate dehydrogenase | 0.51 | ABCV34_RS10280 | | anthranilate synthase component I | low | > 48 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.63 | GFF3360 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.53 | GFF3106 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.87 | 9 |
Desulfovibrio vulgaris Miyazaki F | 0.61 | DvMF_1794 | | 3-isopropylmalate dehydrogenase (RefSeq) | 0.29 | DvMF_1746 | | Anthranilate synthase (RefSeq) | 0.81 | 37 |
Phaeobacter inhibens DSM 17395 | 0.60 | PGA1_c29830 | | 3-isopropylmalate dehydrogenase LeuB | 0.39 | PGA1_c16860 | | anthranilate synthase component 1 | — | — |
Dinoroseobacter shibae DFL-12 | 0.58 | Dshi_0081 | | 3-isopropylmalate dehydrogenase (RefSeq) | 0.41 | Dshi_1796 | | anthranilate synthase component I (RefSeq) | — | — |
Synechococcus elongatus PCC 7942 | 0.58 | Synpcc7942_1505 | leuB | 3-isopropylmalate dehydrogenase | 0.39 | Synpcc7942_1003 | trpE | anthranilate synthase, component I | — | — |
Azospirillum sp. SherDot2 | 0.57 | MPMX19_00607 | | 3-isopropylmalate dehydrogenase | 0.41 | MPMX19_00893 | | Anthranilate synthase component 1 | low | > 112 |
Desulfovibrio vulgaris Hildenborough JW710 | 0.57 | DVU2985 | leuB | 3-isopropylmalate dehydrogenase (TIGR) | 0.28 | DVU0465 | trpE | anthranilate synthase, component I (TIGR) | 0.81 | 46 |
Magnetospirillum magneticum AMB-1 | 0.56 | AMB_RS20570 | | 3-isopropylmalate dehydrogenase | 0.41 | AMB_RS09175 | | anthranilate synthase component I | — | — |
Rhodospirillum rubrum S1H | 0.56 | Rru_A1191 | | 3-isopropylmalate dehydrogenase (NCBI) | 0.41 | Rru_A1891 | | Anthranilate synthase component I (NCBI) | 0.64 | 50 |
Sphingomonas koreensis DSMZ 15582 | 0.56 | Ga0059261_3190 | | 3-isopropylmalate dehydrogenase | 0.36 | Ga0059261_0256 | | anthranilate synthase component I, non-proteobacterial lineages | 0.95 | 28 |
Azospirillum brasilense Sp245 | 0.55 | AZOBR_RS14130 | | 3-isopropylmalate dehydrogenase | 0.41 | AZOBR_RS07490 | | anthranilate synthase subunit I | low | > 97 |
Escherichia coli Nissle 1917 | 0.54 | ECOLIN_RS00395 | | 3-isopropylmalate dehydrogenase | 0.25 | ECOLIN_RS07615 | | anthranilate synthase component I | — | — |
Escherichia coli ECRC99 | 0.54 | KEDOAH_17435 | leuB | 3-isopropylmalate dehydrogenase | 0.25 | KEDOAH_26095 | trpE | anthranilate synthase component I | — | — |
Escherichia coli ECOR38 | 0.54 | HEPCGN_08700 | leuB | 3-isopropylmalate dehydrogenase | 0.25 | HEPCGN_25535 | trpE | anthranilate synthase component I | low | > 85 |
Escherichia coli ECRC102 | 0.54 | NIAGMN_08570 | leuB | 3-isopropylmalate dehydrogenase | 0.25 | NIAGMN_26825 | trpE | anthranilate synthase component I | — | — |
Escherichia coli ECRC98 | 0.54 | JDDGAC_14315 | leuB | 3-isopropylmalate dehydrogenase | 0.25 | JDDGAC_05200 | trpE | anthranilate synthase component I | — | — |
Escherichia coli ECRC101 | 0.54 | MCAODC_01235 | leuB | 3-isopropylmalate dehydrogenase | 0.25 | MCAODC_15610 | trpE | anthranilate synthase component I | — | — |
Escherichia coli ECRC101 | 0.54 | OKFHMN_10720 | leuB | 3-isopropylmalate dehydrogenase | 0.25 | OKFHMN_02655 | trpE | anthranilate synthase component I | — | — |
Escherichia coli BL21 | 0.54 | ECD_00075 | | 3-isopropylmalate dehydrogenase, NAD(+)-dependent | 0.25 | ECD_01238 | | component I of anthranilate synthase | 0.50 | 42 |
Escherichia coli BW25113 | 0.54 | b0073 | leuB | 3-isopropylmalate dehydrogenase (VIMSS) | 0.25 | b1264 | trpE | anthranilate synthase component I (NCBI) | 0.83 | 61 |
Escherichia coli ECOR27 | 0.54 | NOLOHH_03065 | leuA | 2-isopropylmalate synthase | 0.25 | NOLOHH_20315 | trpE | anthranilate synthase component I | low | > 57 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_03584 | | 3-isopropylmalate dehydrogenase | 0.25 | OHPLBJKB_02419 | | Anthranilate synthase component 1 | low | > 73 |
Shewanella loihica PV-4 | 0.53 | Shew_3471 | | 3-isopropylmalate dehydrogenase (RefSeq) | 0.25 | Shew_2251 | | anthranilate synthase component I (RefSeq) | 0.93 | 42 |
Bosea sp. OAE506 | 0.53 | ABIE41_RS11860 | | 3-isopropylmalate dehydrogenase | 0.39 | ABIE41_RS15730 | | anthranilate synthase component I | — | — |
Shewanella sp. ANA-3 | 0.53 | Shewana3_3760 | | 3-isopropylmalate dehydrogenase (RefSeq) | 0.26 | Shewana3_1520 | | anthranilate synthase component I (RefSeq) | 0.93 | 20 |
Shewanella oneidensis MR-1 | 0.53 | SO4235 | leuB | 3-isopropylmalate dehydrogenase (NCBI ptt file) | 0.26 | SO3019 | trpE | anthranilate synthase component I (NCBI ptt file) | 0.93 | 44 |
Caulobacter crescentus NA1000 | 0.51 | CCNA_00193 | | 3-isopropylmalate dehydrogenase | 0.37 | CCNA_01972 | | anthranilate synthase component I | 0.91 | 34 |
Caulobacter crescentus NA1000 Δfur | 0.51 | CCNA_00193 | | 3-isopropylmalate dehydrogenase | 0.37 | CCNA_01972 | | anthranilate synthase component I | low | > 67 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.49 | ABZR88_RS11605 | | 3-isopropylmalate dehydrogenase | 0.27 | ABZR88_RS16595 | | anthranilate synthase component I family protein | — | — |
Lysobacter sp. OAE881 | 0.49 | ABIE51_RS17585 | | 3-isopropylmalate dehydrogenase | 0.53 | ABIE51_RS04150 | | anthranilate synthase component I | low | > 62 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.49 | CA265_RS15850 | | 3-isopropylmalate dehydrogenase | 0.27 | CA265_RS22890 | | anthranilate synthase component I | 0.78 | 58 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.46 | Echvi_2062 | | 3-isopropylmalate dehydrogenase | 0.25 | Echvi_2504 | | Anthranilate/para-aminobenzoate synthases component I | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS10325 | | 3-isopropylmalate dehydrogenase | 0.56 | LRK54_RS11415 | | anthranilate synthase component I | low | > 59 |
Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS09965 | | 3-isopropylmalate dehydrogenase | 0.56 | LRK55_RS11145 | | anthranilate synthase component I | low | > 63 |
Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_13595 | leuB | 3-isopropylmalate dehydrogenase | 0.54 | OKGIIK_12405 | trpE | anthranilate synthase component I | low | > 52 |
Parabacteroides merdae CL09T00C40 | 0.45 | HMPREF1078_RS16640 | | 3-isopropylmalate dehydrogenase | 0.25 | HMPREF1078_RS00145 | | anthranilate synthase component I family protein | 0.93 | 38 |
Bacteroides stercoris CC31F | 0.44 | HMPREF1181_RS14125 | | 3-isopropylmalate dehydrogenase | 0.26 | HMPREF1181_RS15325 | | anthranilate synthase component I family protein | 0.89 | 31 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.43 | A4249_RS09995 | | 3-isopropylmalate dehydrogenase | 0.37 | A4249_RS06155 | | anthranilate synthase component I | low | > 48 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.43 | CA264_09445 | | 3-isopropylmalate dehydrogenase | 0.25 | CA264_05055 | | anthranilate synthase component I | low | > 74 |
Phocaeicola vulgatus CL09T03C04 | 0.43 | HMPREF1058_RS14565 | | 3-isopropylmalate dehydrogenase | 0.27 | HMPREF1058_RS07175 | | anthranilate synthase component I family protein | 0.83 | 6 |
Bacteroides thetaiotaomicron VPI-5482 | 0.43 | BT1857 | | 3-isopropylmalate dehydrogenase (NCBI ptt file) | 0.25 | BT0532 | | anthranilate synthase component I (NCBI ptt file) | 0.80 | 39 |
Phocaeicola dorei CL03T12C01 | 0.43 | ABI39_RS10215 | | 3-isopropylmalate dehydrogenase | 0.26 | ABI39_RS21050 | | anthranilate synthase component I family protein | 0.77 | 33 |
Bacteroides ovatus ATCC 8483 | 0.42 | BACOVA_04600 | | 3-isopropylmalate dehydrogenase | 0.26 | BACOVA_03780 | | chorismate binding enzyme | 0.92 | 40 |
Dyella japonica UNC79MFTsu3.2 | 0.42 | ABZR86_RS15950 | | 3-isopropylmalate dehydrogenase | 0.54 | ABZR86_RS12180 | | anthranilate synthase component I | 0.94 | 27 |
Methanococcus maripaludis JJ | 0.29 | MMJJ_RS02220 | | 3-isopropylmalate dehydrogenase | 0.27 | MMJJ_RS09175 | | anthranilate synthase component I | — | — |
Methanococcus maripaludis S2 | 0.28 | MMP_RS02855 | | 3-isopropylmalate dehydrogenase | 0.27 | MMP_RS05205 | | anthranilate synthase component I | — | — |
Mycobacterium tuberculosis H37Rv | 0.27 | Rv2995c | | Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) | 0.37 | Rv1609 | | Anthranilate synthase component I TrpE (glutamine amidotransferase) | — | — |
Bifidobacterium breve UCC2003 | 0.25 | BBR_RS12870 | | 3-isopropylmalate dehydrogenase | 0.38 | BBR_RS16085 | | anthranilate synthase component I | low | > 34 |
Not shown: 22 genomes with orthologs for PP_1988 only; 0 genomes with orthologs for PP_0417 only