| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_4191 | | Transcriptional regulator | 1.0 | Psest_0063 | | tryptophan synthase, beta subunit | 0.29 | 9 |
| Pseudomonas fluorescens FW300-N2E2 | 0.90 | Pf6N2E2_4353 | | Hydrogen peroxide-inducible genes activator | 0.85 | Pf6N2E2_4048 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.89 | Psyr_0202 | | transcriptional regulator, LysR family | 0.82 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.89 | Psyr_0202 | | transcriptional regulator, LysR family | 0.82 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
| Pseudomonas putida KT2440 | 0.88 | PP_5309 | | oxidative and nitrosative stress transcriptional dual regulator | 0.83 | PP_0083 | | tryptophan synthase beta chain | low | > 96 |
| Pseudomonas simiae WCS417 | 0.87 | PS417_27865 | | LysR family transcriptional regulator | 0.85 | PS417_00185 | | tryptophan synthase subunit beta | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.87 | AO356_12385 | | LysR family transcriptional regulator | 0.85 | AO356_10915 | | tryptophan synthase subunit beta | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.87 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | 0.85 | PFLU_RS00180 | | tryptophan synthase subunit beta | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.87 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | 0.85 | PFLU_RS00180 | | tryptophan synthase subunit beta | low | > 109 |
| Pseudomonas sp. RS175 | 0.86 | PFR28_04434 | | Hydrogen peroxide-inducible genes activator | 0.85 | PFR28_04715 | | Tryptophan synthase beta chain | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.86 | AO353_09315 | | LysR family transcriptional regulator | 0.85 | AO353_10710 | | tryptophan synthase subunit beta | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.86 | PfGW456L13_773 | | Hydrogen peroxide-inducible genes activator | 0.85 | PfGW456L13_566 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.86 | OH686_13510 | | Hydrogen peroxide-inducible genes activator | 0.87 | OH686_12425 | | tryptophan synthase, beta subunit | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.85 | Pf1N1B4_2106 | | Hydrogen peroxide-inducible genes activator | 0.85 | Pf1N1B4_1831 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 87 |
| Marinobacter adhaerens HP15 | 0.64 | HP15_308 | | oxidative stress regulatory protein OxyR | 0.63 | HP15_1827 | | tryptophan synthase, beta subunit | — | — |
| Dechlorosoma suillum PS | 0.54 | Dsui_0823 | | transcriptional regulator | 0.66 | Dsui_3192 | | tryptophan synthase, beta subunit | — | — |
| Castellaniella sp019104865 MT123 | 0.53 | ABCV34_RS03575 | | LysR substrate-binding domain-containing protein | 0.65 | ABCV34_RS08435 | | tryptophan synthase subunit beta | — | — |
| Kangiella aquimarina DSM 16071 | 0.53 | B158DRAFT_0567 | | Transcriptional regulator | 0.49 | B158DRAFT_2429 | | tryptophan synthase, beta subunit | low | > 40 |
| Ralstonia solanacearum IBSBF1503 | 0.52 | RALBFv3_RS05605 | | hydrogen peroxide-inducible genes activator | 0.66 | RALBFv3_RS02585 | | tryptophan synthase subunit beta | — | — |
| Ralstonia solanacearum UW163 | 0.52 | UW163_RS08020 | | hydrogen peroxide-inducible genes activator | 0.66 | UW163_RS11140 | | tryptophan synthase subunit beta | — | — |
| Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS11690 | | hydrogen peroxide-inducible genes activator | 0.66 | RPSI07_RS14730 | | tryptophan synthase subunit beta | low | > 81 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.51 | H281DRAFT_04673 | | transcriptional regulator, LysR family | 0.68 | H281DRAFT_06067 | | tryptophan synthase, beta chain | low | > 103 |
| Ralstonia solanacearum GMI1000 | 0.51 | RS_RS13470 | | hydrogen peroxide-inducible genes activator | 0.66 | RS_RS09965 | | tryptophan synthase subunit beta | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS03470 | | LysR family transcriptional regulator | 0.68 | BPHYT_RS33875 | | tryptophan synthase subunit alpha | 0.42 | 29 |
| Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS26625 | | LysR substrate-binding domain-containing protein | 0.68 | QEN71_RS17645 | | tryptophan synthase subunit beta | 0.58 | 58 |
| Paraburkholderia graminis OAS925 | 0.50 | ABIE53_000834 | | LysR family hydrogen peroxide-inducible transcriptional activator | 0.67 | ABIE53_004809 | | tryptophan synthase beta chain | — | — |
| Ralstonia sp. UNC404CL21Col | 0.50 | ABZR87_RS01255 | | LysR substrate-binding domain-containing protein | 0.67 | ABZR87_RS14500 | | tryptophan synthase subunit beta | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.49 | HSERO_RS18935 | | LysR family transcriptional regulator | 0.63 | HSERO_RS16475 | | tryptophan synthase subunit alpha | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.48 | RR42_RS17385 | | LysR family transcriptional regulator | 0.67 | RR42_RS14360 | | tryptophan synthase subunit alpha | low | > 128 |
| Variovorax sp. SCN45 | 0.47 | GFF5549 | | Hydrogen peroxide-inducible genes activator => OxyR | 0.64 | GFF3883 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Variovorax sp. OAS795 | 0.46 | ABID97_RS01570 | | LysR substrate-binding domain-containing protein | 0.63 | ABID97_RS08430 | | tryptophan synthase subunit beta | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.45 | Ac3H11_784 | | Hydrogen peroxide-inducible genes activator | 0.64 | Ac3H11_1534 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF2803 | | Hydrogen peroxide-inducible genes activator | 0.63 | GFF3355 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 90 |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_04930 | | Hydrogen peroxide-inducible genes activator | 0.74 | MPMX19_02736 | | Tryptophan synthase beta chain | low | > 112 |
| Dickeya dianthicola 67-19 | 0.37 | HGI48_RS20405 | | DNA-binding transcriptional regulator OxyR | 0.52 | HGI48_RS10465 | | tryptophan synthase subunit beta | low | > 71 |
| Dickeya dianthicola ME23 | 0.37 | DZA65_RS21450 | | DNA-binding transcriptional regulator OxyR | 0.52 | DZA65_RS10945 | | tryptophan synthase subunit beta | low | > 75 |
| Escherichia coli BW25113 | 0.37 | b3961 | oxyR | DNA-binding transcriptional dual regulator (NCBI) | 0.51 | b1261 | trpB | tryptophan synthase subunit beta (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.37 | EFB2_04651 | | Hydrogen peroxide-inducible genes activator | 0.51 | EFB2_02665 | | Tryptophan synthase beta chain | low | > 86 |
| Escherichia coli ECRC102 | 0.37 | NIAGMN_11315 | oxyR | DNA-binding transcriptional regulator OxyR | 0.51 | NIAGMN_26840 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli ECRC62 | 0.37 | BNILDI_05825 | oxyR | DNA-binding transcriptional regulator OxyR | 0.51 | BNILDI_18475 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.37 | OHPLBJKB_04089 | | Hydrogen peroxide-inducible genes activator | 0.51 | OHPLBJKB_02422 | | Tryptophan synthase beta chain | low | > 73 |
| Escherichia coli BL21 | 0.37 | ECD_03846 | | oxidative and nitrosative stress transcriptional regulator | 0.51 | ECD_01235 | | tryptophan synthase, beta subunit | low | > 60 |
| Escherichia coli ECOR38 | 0.37 | HEPCGN_12210 | oxyR | DNA-binding transcriptional regulator OxyR | 0.51 | HEPCGN_25520 | trpB | tryptophan synthase subunit beta | low | > 85 |
| Escherichia coli ECOR27 | 0.37 | NOLOHH_05700 | oxyR | DNA-binding transcriptional regulator OxyR | 0.51 | NOLOHH_20330 | trpB | tryptophan synthase subunit beta | low | > 57 |
| Escherichia coli ECRC98 | 0.37 | JDDGAC_17190 | oxyR | DNA-binding transcriptional regulator OxyR | 0.51 | JDDGAC_05215 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli ECRC101 | 0.37 | OKFHMN_13565 | oxyR | DNA-binding transcriptional regulator OxyR | 0.51 | OKFHMN_02670 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli ECRC101 | 0.37 | MCAODC_04065 | oxyR | DNA-binding transcriptional regulator OxyR | 0.51 | MCAODC_15595 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli ECRC99 | 0.37 | KEDOAH_14595 | oxyR | DNA-binding transcriptional regulator OxyR | 0.51 | KEDOAH_26080 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli Nissle 1917 | 0.37 | ECOLIN_RS22870 | | DNA-binding transcriptional regulator OxyR | 0.51 | ECOLIN_RS07600 | | tryptophan synthase subunit beta | low | > 52 |
| Dickeya dadantii 3937 | 0.37 | DDA3937_RS00970 | | DNA-binding transcriptional regulator OxyR | 0.52 | DDA3937_RS10465 | | tryptophan synthase subunit beta | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.36 | HER17_RS00955 | | DNA-binding transcriptional regulator OxyR | 0.53 | HER17_RS10935 | | tryptophan synthase subunit beta | low | > 75 |
| Enterobacter sp. TBS_079 | 0.36 | MPMX20_04519 | | Hydrogen peroxide-inducible genes activator | 0.53 | MPMX20_02513 | | Tryptophan synthase beta chain | low | > 85 |
| Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_4424 | | Transcriptional regulator | 0.53 | EX28DRAFT_0933 | | tryptophan synthase, beta subunit | — | — |
| Azospirillum brasilense Sp245 | 0.36 | AZOBR_RS31340 | | LysR family transcriptional regulator | 0.74 | AZOBR_RS00525 | | tryptophan synthase subunit beta | low | > 97 |
| Klebsiella michiganensis M5al | 0.36 | BWI76_RS00865 | | DNA-binding transcriptional regulator OxyR | 0.52 | BWI76_RS11845 | | tryptophan synthase subunit beta | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF2347 | | Hydrogen peroxide-inducible genes activator | 0.53 | GFF2725 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 78 |
| Rahnella sp. WP5 | 0.35 | EX31_RS14170 | | DNA-binding transcriptional regulator OxyR | 0.51 | EX31_RS09975 | | tryptophan synthase subunit beta | low | > 89 |
| Serratia liquefaciens MT49 | 0.35 | IAI46_24475 | | DNA-binding transcriptional regulator OxyR | 0.52 | IAI46_14040 | | tryptophan synthase subunit beta | low | > 86 |
| Pantoea sp. MT58 | 0.35 | IAI47_00930 | | DNA-binding transcriptional regulator OxyR | 0.52 | IAI47_09170 | | tryptophan synthase subunit beta | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.35 | LU632_RS19590 | oxyR | DNA-binding transcriptional regulator OxyR | 0.52 | LU632_RS12770 | trpB | tryptophan synthase subunit beta | low | > 74 |
| Rhodospirillum rubrum S1H | 0.33 | Rru_A2782 | | Transcriptional Regulator, LysR family (NCBI) | 0.71 | Rru_A3427 | | Tryptophan synthase, beta chain (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.33 | AMB_RS03045 | | hydrogen peroxide-inducible genes activator | 0.73 | AMB_RS20295 | | tryptophan synthase subunit beta | — | — |
| Rhodanobacter sp. FW510-T8 | 0.33 | OKGIIK_01995 | lysR | DNA-binding transcriptional regulator OxyR | 0.65 | OKGIIK_04845 | trpB | tryptophan synthase subunit beta | low | > 52 |
| Vibrio cholerae E7946 ATCC 55056 | 0.33 | CSW01_13340 | | DNA-binding transcriptional regulator OxyR | 0.52 | CSW01_05930 | | tryptophan synthase subunit beta | low | > 62 |
| Sphingomonas koreensis DSMZ 15582 | 0.32 | Ga0059261_0159 | | Transcriptional regulator | 0.72 | Ga0059261_0238 | | tryptophan synthase, beta subunit | — | — |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_03811 | | LysR-family transcriptional regulator | 0.68 | CCNA_03658 | | tryptophan synthase beta chain | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_03811 | | LysR-family transcriptional regulator | 0.68 | CCNA_03658 | | tryptophan synthase beta chain | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.32 | Xcc-8004.4224.1 | | Hydrogen peroxide-inducible genes activator | 0.63 | Xcc-8004.1964.1 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.31 | LRK55_RS04545 | | LysR substrate-binding domain-containing protein | 0.65 | LRK55_RS01465 | | tryptophan synthase subunit beta | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.31 | LRK54_RS04765 | | LysR substrate-binding domain-containing protein | 0.65 | LRK54_RS01685 | | tryptophan synthase subunit beta | low | > 59 |
| Lysobacter sp. OAE881 | 0.31 | ABIE51_RS05475 | | LysR substrate-binding domain-containing protein | 0.65 | ABIE51_RS08260 | | tryptophan synthase subunit beta | low | > 62 |
| Sinorhizobium meliloti 1021 | 0.30 | SMc00818 | | hydrogen peroxide-inducible genes activator (morphology and AUTO-aggregation control protein) | 0.72 | SMc02766 | | tryptophan synthase subunit beta | low | > 103 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.30 | Echvi_1045 | | Transcriptional regulator | 0.54 | Echvi_2510 | | tryptophan synthase, beta subunit | — | — |
| Dinoroseobacter shibae DFL-12 | 0.30 | Dshi_0727 | | transcriptional regulator, LysR family (RefSeq) | 0.69 | Dshi_1031 | | tryptophan synthase, beta subunit (RefSeq) | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.30 | ABZR86_RS19355 | | DNA-binding transcriptional regulator OxyR | 0.66 | ABZR86_RS08000 | | tryptophan synthase subunit beta | low | > 74 |
| Phaeobacter inhibens DSM 17395 | 0.30 | PGA1_78p00040 | | hydrogen peroxide-inducible genes activator OxyR | 0.69 | PGA1_c04870 | | tryptophan synthase beta chain | — | — |
| Agrobacterium fabrum C58 | 0.29 | Atu4641 | | LysR family transcriptional regulator | 0.71 | Atu0018 | | tryptophan synthase beta subunit | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.29 | BT4716 | | redox-sensitive transcriptional activator (NCBI ptt file) | 0.52 | BT0533 | | tryptophan synthase beta chain (NCBI ptt file) | low | > 81 |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS01195 | | hydrogen peroxide-inducible genes activator | 0.72 | ABIE41_RS04270 | | tryptophan synthase subunit beta | — | — |
| Bacteroides ovatus ATCC 8483 | 0.28 | BACOVA_05567 | | LysR substrate binding domain protein | 0.52 | BACOVA_03779 | | tryptophan synthase, beta subunit | low | > 94 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.28 | CA265_RS19680 | | DNA-binding transcriptional regulator OxyR | 0.53 | CA265_RS05020 | | tryptophan synthase subunit beta | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.28 | ABZR88_RS18535 | | hydrogen peroxide-inducible genes activator | 0.55 | ABZR88_RS10665 | | tryptophan synthase subunit beta | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.28 | CA264_13765 | | DNA-binding transcriptional regulator OxyR | 0.57 | CA264_05080 | | tryptophan synthase subunit beta | low | > 74 |
| Bacteroides stercoris CC31F | 0.28 | HMPREF1181_RS02160 | | hydrogen peroxide-inducible genes activator | 0.53 | HMPREF1181_RS15320 | | tryptophan synthase subunit beta | low | > 56 |
| Phocaeicola dorei CL03T12C01 | 0.27 | ABI39_RS06075 | | hydrogen peroxide-inducible genes activator | 0.53 | ABI39_RS21045 | | tryptophan synthase subunit beta | low | > 72 |
| Parabacteroides merdae CL09T00C40 | 0.27 | HMPREF1078_RS01140 | | hydrogen peroxide-inducible genes activator | 0.53 | HMPREF1078_RS00150 | | tryptophan synthase subunit beta | low | > 61 |
| Rhodopseudomonas palustris CGA009 | 0.26 | TX73_002235 | | LysR substrate-binding domain-containing protein | 0.73 | TX73_000360 | | tryptophan synthase subunit beta | — | — |
| Acinetobacter radioresistens SK82 | 0.26 | MPMX26_02334 | | Hydrogen peroxide-inducible genes activator | 0.64 | MPMX26_02617 | | Tryptophan synthase beta chain | low | > 36 |
| Shewanella oneidensis MR-1 | 0.25 | SO1328 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.52 | SO3023 | trpB | tryptophan synthase, beta subunit (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.25 | Shewana3_3046 | | LysR family transcriptional regulator (RefSeq) | 0.52 | Shewana3_1516 | | tryptophan synthase subunit beta (RefSeq) | low | > 73 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.24 | A4249_RS12755 | | hydrogen peroxide-inducible genes activator | 0.68 | A4249_RS11330 | | tryptophan synthase subunit beta | — | — |
| Alteromonas macleodii MIT1002 | 0.24 | MIT1002_01120 | | Morphology and auto-aggregation control protein | 0.54 | MIT1002_01426 | | Tryptophan synthase beta chain | — | — |
| Shewanella amazonensis SB2B | 0.24 | Sama_0860 | | LysR family transcriptional regulator (RefSeq) | 0.52 | Sama_2133 | | tryptophan synthase subunit beta (RefSeq) | low | > 62 |
| Rhizobium sp. OAE497 | 0.23 | ABIE40_RS15045 | | hydrogen peroxide-inducible genes activator | 0.71 | ABIE40_RS19335 | | tryptophan synthase subunit beta | — | — |
| Shewanella loihica PV-4 | 0.23 | Shew_1035 | | LysR family transcriptional regulator (RefSeq) | 0.53 | Shew_2255 | | tryptophan synthase subunit beta (RefSeq) | low | > 60 |
Not shown: 0 genomes with orthologs for Psest_4191 only; 7 genomes with orthologs for Psest_0063 only