Conservation of cofitness between GFF829 and GFF5493 in Hydrogenophaga sp. GW460-11-11-14-LB1

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF829 DNA repair protein RecN 1.0 GFF5493 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) 0.79 5
Acidovorax sp. GW101-3H11 0.59 Ac3H11_3460 DNA repair protein RecN 0.47 Ac3H11_2076 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 79
Variovorax sp. SCN45 0.59 GFF2357 DNA repair protein RecN 0.47 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 127
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26535 DNA repair protein RecN 0.70 QEN71_RS08005 glucose-6-phosphate dehydrogenase low > 153
Ralstonia solanacearum UW163 0.45 UW163_RS08210 DNA repair protein RecN 0.52 UW163_RS17130 glucose-6-phosphate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS05415 DNA repair protein RecN 0.52 RALBFv3_RS16390 glucose-6-phosphate dehydrogenase low > 76
Ralstonia solanacearum PSI07 0.45 RPSI07_RS11890 DNA repair protein RecN 0.52 RPSI07_RS07315 glucose-6-phosphate dehydrogenase low > 81
Ralstonia solanacearum GMI1000 0.44 RS_RS13275 DNA repair protein RecN 0.52 RS_RS24615 glucose-6-phosphate dehydrogenase low > 80
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS01065 DNA repair protein RecN 0.52 ABZR87_RS22915 glucose-6-phosphate dehydrogenase low > 80
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS05910 DNA repair protein 0.52 RR42_RS37405 glucose-6-phosphate dehydrogenase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_04692 DNA replication and repair protein RecN 0.71 H281DRAFT_05358 glucose-6-phosphate 1-dehydrogenase low > 103
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS03060 DNA repair protein 0.55 HSERO_RS05510 glucose-6-phosphate 1-dehydrogenase — —
Paraburkholderia graminis OAS925 0.43 ABIE53_000856 DNA repair protein RecN (Recombination protein N) 0.70 ABIE53_006464 glucose-6-phosphate 1-dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS03560 DNA repair protein 0.70 BPHYT_RS24370 glucose-6-phosphate 1-dehydrogenase low > 109
Enterobacter sp. TBS_079 0.37 MPMX20_03486 DNA repair protein RecN 0.44 MPMX20_02757 Glucose-6-phosphate 1-dehydrogenase low > 85
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2719 DNA repair protein RecN 0.44 EX28DRAFT_0704 glucose-6-phosphate 1-dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF4162 DNA repair protein RecN 0.44 GFF1631 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 78
Pseudomonas sp. S08-1 0.36 OH686_17050 DNA repair protein RecN 0.50 OH686_13085 glucose-6-phosphate dehydrogenase low > 80
Dickeya dadantii 3937 0.35 DDA3937_RS04325 DNA repair protein RecN 0.44 DDA3937_RS10135 glucose-6-phosphate dehydrogenase 0.47 71
Pantoea sp. MT58 0.35 IAI47_04810 DNA repair protein RecN 0.44 IAI47_08495 glucose-6-phosphate dehydrogenase — —
Klebsiella michiganensis M5al 0.35 BWI76_RS21560 DNA repair protein RecN 0.44 BWI76_RS18105 glucose-6-phosphate dehydrogenase — —
Dickeya dianthicola ME23 0.35 DZA65_RS04235 DNA repair protein RecN 0.44 DZA65_RS10580 glucose-6-phosphate dehydrogenase low > 75
Dickeya dianthicola 67-19 0.35 HGI48_RS04320 DNA repair protein RecN 0.44 HGI48_RS10165 glucose-6-phosphate dehydrogenase low > 71
Shewanella amazonensis SB2B 0.35 Sama_1026 recombination and repair protein (RefSeq) 0.45 Sama_1812 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Serratia liquefaciens MT49 0.35 IAI46_19635 DNA repair protein RecN 0.46 IAI46_14575 glucose-6-phosphate dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_01091 DNA repair protein RecN 0.44 OHPLBJKB_01877 Glucose-6-phosphate 1-dehydrogenase low > 73
Shewanella sp. ANA-3 0.35 Shewana3_1104 recombination and repair protein (RefSeq) 0.46 Shewana3_2151 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Escherichia coli BL21 0.35 ECD_02504 recombination and repair protein 0.44 ECD_01823 glucose-6-phosphate 1-dehydrogenase — —
Escherichia coli ECOR27 0.35 NOLOHH_12815 recN DNA repair protein RecN 0.44 NOLOHH_16845 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECOR38 0.35 HEPCGN_20265 recN DNA repair protein RecN 0.44 HEPCGN_04740 zwf glucose-6-phosphate dehydrogenase low > 85
Escherichia coli ECRC62 0.35 BNILDI_11620 recN DNA repair protein RecN 0.44 BNILDI_15640 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli BW25113 0.35 b2616 recN recombination and repair protein (NCBI) 0.44 b1852 zwf glucose-6-phosphate 1-dehydrogenase (NCBI) — —
Escherichia fergusonii Becca 0.35 EFB2_01277 DNA repair protein RecN 0.44 EFB2_02091 Glucose-6-phosphate 1-dehydrogenase low > 86
Escherichia coli Nissle 1917 0.35 ECOLIN_RS14775 DNA repair protein RecN 0.44 ECOLIN_RS10315 glucose-6-phosphate dehydrogenase — —
Rahnella sp. WP5 0.35 EX31_RS21760 DNA repair protein RecN 0.45 EX31_RS10630 glucose-6-phosphate dehydrogenase — —
Shewanella oneidensis MR-1 0.35 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.46 SO2489 zwf glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) low > 76
Escherichia coli ECRC98 0.35 JDDGAC_24810 recN DNA repair protein RecN 0.44 JDDGAC_00910 zwf glucose-6-phosphate dehydrogenase — —
Pectobacterium carotovorum WPP14 0.35 HER17_RS17420 DNA repair protein RecN 0.45 HER17_RS11780 glucose-6-phosphate dehydrogenase low > 75
Escherichia coli ECRC99 0.35 KEDOAH_07075 recN DNA repair protein RecN 0.44 KEDOAH_01770 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC101 0.35 MCAODC_11670 recN DNA repair protein RecN 0.44 MCAODC_19070 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC102 0.35 NIAGMN_18915 recN DNA repair protein RecN 0.44 NIAGMN_01725 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC101 0.35 OKFHMN_21145 recN DNA repair protein RecN 0.44 OKFHMN_26335 zwf glucose-6-phosphate dehydrogenase — —
Marinobacter adhaerens HP15 0.34 HP15_3084 DNA repair protein RecN 0.45 HP15_2179 glucose-6-phosphate 1-dehydrogenase 0.30 58
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_3370 DNA repair protein RecN 0.47 Pf6N2E2_2885 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 103
Pseudomonas sp. RS175 0.33 PFR28_00071 DNA repair protein RecN 0.47 PFR28_00573 Glucose-6-phosphate 1-dehydrogenase low > 88
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_4197 DNA replication and repair protein RecN 0.47 Psyr_1120 glucose-6-phosphate 1-dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_4197 DNA replication and repair protein RecN 0.47 Psyr_1120 glucose-6-phosphate 1-dehydrogenase low > 86
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_5106 DNA repair protein RecN 0.47 PfGW456L13_1901 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 87
Pseudomonas stutzeri RCH2 0.33 Psest_0962 DNA repair protein RecN 0.52 Psest_4089 glucose-6-phosphate 1-dehydrogenase low > 67
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_07510 DNA repair protein RecN 0.47 AO356_05160 glucose-6-phosphate dehydrogenase low > 104
Pseudomonas simiae WCS417 0.33 PS417_24070 recombination and repair protein 0.46 PS417_22110 glucose-6-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_05660 DNA repair protein RecN 0.47 AO353_03360 glucose-6-phosphate dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_1178 DNA repair protein RecN 0.47 Pf1N1B4_589 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) — —
Erwinia tracheiphila SCR3 0.33 LU632_RS16985 recN DNA repair protein RecN 0.44 LU632_RS13360 zwf glucose-6-phosphate dehydrogenase 0.44 57
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_04395 DNA repair protein RecN 0.39 CSW01_18625 glucose-6-phosphate dehydrogenase low > 62
Pseudomonas fluorescens SBW25 0.33 PFLU_RS25910 DNA repair protein RecN 0.46 PFLU_RS23725 glucose-6-phosphate dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS25910 DNA repair protein RecN 0.46 PFLU_RS23725 glucose-6-phosphate dehydrogenase low > 109
Shewanella loihica PV-4 0.32 Shew_1196 recombination and repair protein (RefSeq) 0.45 Shew_2048 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Pseudomonas putida KT2440 0.32 PP_4729 factor used in recombination and DNA repair 0.51 PP_5351 glucose-6-phosphate 1-dehydrogenase low > 96
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS05665 DNA repair protein RecN 0.51 ABZR86_RS14700 glucose-6-phosphate dehydrogenase low > 74
Rhodanobacter denitrificans MT42 0.30 LRK55_RS17815 DNA repair protein RecN 0.51 LRK55_RS07600 glucose-6-phosphate dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.3431.1 DNA repair protein RecN 0.36 Xcc-8004.2450.1 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 74
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS17960 DNA repair protein RecN 0.51 LRK54_RS07870 glucose-6-phosphate dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_07340 recN DNA repair protein RecN 0.52 OKGIIK_14360 zwf glucose-6-phosphate dehydrogenase — —
Lysobacter sp. OAE881 0.29 ABIE51_RS11655 DNA repair protein RecN 0.49 ABIE51_RS01620 glucose-6-phosphate dehydrogenase — —
Alteromonas macleodii MIT1002 0.29 MIT1002_01443 Recombination protein N 0.47 MIT1002_02407 Glucose-6-phosphate 1-dehydrogenase low > 70
Sinorhizobium meliloti 1021 0.28 SMc01877 DNA repair protein 0.51 SMc03070 glucose-6-phosphate 1-dehydrogenase low > 103
Agrobacterium fabrum C58 0.28 Atu2083 DNA repair protein RecN 0.50 Atu0600 glucose-6-phosphate 1-dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1026 DNA repair protein RecN 0.46 Ga0059261_0352 glucose-6-phosphate 1-dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.26 TX73_018240 DNA repair protein RecN 0.35 TX73_018845 glucose-6-phosphate dehydrogenase low > 86
Azospirillum sp. SherDot2 0.26 MPMX19_01601 DNA repair protein RecN 0.50 MPMX19_05119 Glucose-6-phosphate 1-dehydrogenase low > 112
Bosea sp. OAE506 0.25 ABIE41_RS12645 DNA repair protein RecN 0.47 ABIE41_RS23515 glucose-6-phosphate dehydrogenase low > 77
Phaeobacter inhibens DSM 17395 0.25 PGA1_c09720 DNA repair protein RecN 0.43 PGA1_c15160 glucose-6-phosphate 1-dehydrogenase low > 62
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS02000 DNA repair protein RecN 0.36 HMPREF1078_RS08635 glucose-6-phosphate dehydrogenase low > 61
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS10900 DNA repair protein RecN 0.38 HMPREF1181_RS12520 glucose-6-phosphate dehydrogenase low > 56
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS06580 DNA repair protein RecN 0.43 ABZR88_RS02975 glucose-6-phosphate dehydrogenase low > 71
Bacteroides ovatus ATCC 8483 0.23 BACOVA_00200 DNA repair protein RecN 0.38 BACOVA_00508 glucose-6-phosphate dehydrogenase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.23 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) 0.38 BT1221 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) low > 81
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_2067 DNA repair protein RecN 0.38 Echvi_2862 glucose-6-phosphate 1-dehydrogenase low > 79
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS14500 DNA repair protein RecN 0.37 ABI39_RS14355 glucose-6-phosphate dehydrogenase low > 72
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS18225 DNA repair protein RecN 0.37 HMPREF1058_RS18030 glucose-6-phosphate dehydrogenase low > 67
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_02062 DNA repair protein recN 0.42 CCNA_02136 glucose-6-phosphate 1-dehydrogenase low > 67
Synechococcus elongatus PCC 7942 0.23 Synpcc7942_1779 recN DNA repair protein RecN 0.38 Synpcc7942_2334 zwf glucose-6-phosphate 1-dehydrogenase low > 38
Caulobacter crescentus NA1000 0.23 CCNA_02062 DNA repair protein recN 0.42 CCNA_02136 glucose-6-phosphate 1-dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.22 Dshi_2413 DNA repair protein RecN (RefSeq) 0.46 Dshi_1684 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS14855 DNA repair protein RecN 0.43 CA265_RS09810 glucose-6-phosphate dehydrogenase low > 88
Mycobacterium tuberculosis H37Rv 0.20 Rv1696 Probable DNA repair protein RecN (recombination protein N) 0.36 Rv1447c Probable glucose-6-phosphate 1-dehydrogenase Zwf2 (G6PD) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS02620 DNA repair protein RecN 0.46 A4249_RS10725 glucose-6-phosphate dehydrogenase — —
Bifidobacterium breve UCC2003 0.19 BBR_RS14030 DNA repair protein RecN 0.35 BBR_RS11480 glucose-6-phosphate dehydrogenase — —

Not shown: 11 genomes with orthologs for GFF829 only; 2 genomes with orthologs for GFF5493 only