Conservation of cofitness between PS417_18585 and PS417_23805 in Pseudomonas simiae WCS417

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_18585 3-isopropylmalate dehydrogenase 1.0 PS417_23805 acetolactate synthase 3 regulatory subunit 0.91 11
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS20565 3-isopropylmalate dehydrogenase 1.00 PFLU_RS25645 acetolactate synthase small subunit 0.52 27
Pseudomonas fluorescens SBW25 0.99 PFLU_RS20565 3-isopropylmalate dehydrogenase 1.00 PFLU_RS25645 acetolactate synthase small subunit low > 109
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 1.00 Pf6N2E2_5176 Acetolactate synthase small subunit (EC 2.2.1.6) 0.91 13
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_21415 3-isopropylmalate dehydrogenase 1.00 AO356_16175 acetolactate synthase 3 regulatory subunit 0.96 9
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 1.00 Pf1N1B4_2879 Acetolactate synthase small subunit (EC 2.2.1.6) 0.85 19
Pseudomonas sp. RS175 0.95 PFR28_02821 3-isopropylmalate dehydrogenase 1.00 PFR28_03698 Acetolactate synthase isozyme 3 small subunit 0.66 17
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 1.00 PfGW456L13_1539 Acetolactate synthase small subunit (EC 2.2.1.6) 0.91 23
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_1985 3-isopropylmalate dehydrogenase 0.98 Psyr_0847 acetolactate synthase, small subunit 0.90 13
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_1985 3-isopropylmalate dehydrogenase 0.98 Psyr_0847 acetolactate synthase, small subunit 0.85 23
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_20635 3-isopropylmalate dehydrogenase 1.00 AO353_14500 acetolactate synthase 3 regulatory subunit 0.88 23
Pseudomonas putida KT2440 0.93 PP_1988 3-isopropylmalate dehydrogenase 0.98 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase 0.90 12
Pseudomonas sp. S08-1 0.88 OH686_04470 3-isopropylmalate dehydrogenase 0.97 OH686_08125 acetolactate synthase, small subunit 0.89 8
Pseudomonas stutzeri RCH2 0.87 Psest_2589 3-isopropylmalate dehydrogenase 0.95 Psest_1037 acetolactate synthase, small subunit 0.80 24
Acinetobacter radioresistens SK82 0.73 MPMX26_00348 3-isopropylmalate dehydrogenase 0.76 MPMX26_00473 Acetolactate synthase isozyme 3 small subunit 0.92 16
Marinobacter adhaerens HP15 0.71 HP15_1832 3-isopropylmalate dehydrogenase 0.84 HP15_532 acetolactate synthase 3 regulatory subunit 0.74 32
Dechlorosoma suillum PS 0.69 Dsui_3198 3-isopropylmalate dehydrogenase 0.65 Dsui_3528 acetolactate synthase, small subunit
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.72 HSERO_RS08655 acetolactate synthase 0.73 43
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.73 ABZR87_RS14950 acetolactate synthase small subunit 0.76 35
Variovorax sp. OAS795 0.64 ABID97_RS08455 3-isopropylmalate dehydrogenase 0.69 ABID97_RS14890 acetolactate synthase small subunit
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.73 H281DRAFT_04552 acetolactate synthase, small subunit low > 103
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS14385 3-isopropylmalate dehydrogenase 0.72 RR42_RS05440 acetolactate synthase
Variovorax sp. SCN45 0.64 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.68 GFF1159 Acetolactate synthase small subunit (EC 2.2.1.6) low > 127
Paraburkholderia graminis OAS925 0.64 ABIE53_004804 3-isopropylmalate dehydrogenase 0.74 ABIE53_001575 acetolactate synthase-1/3 small subunit low > 113
Ralstonia solanacearum GMI1000 0.64 RS_RS09990 3-isopropylmalate dehydrogenase 0.72 RS_RS10415 acetolactate synthase small subunit low > 80
Ralstonia solanacearum UW163 0.64 UW163_RS11115 3-isopropylmalate dehydrogenase 0.72 UW163_RS10680 acetolactate synthase small subunit
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.72 RALBFv3_RS03045 acetolactate synthase small subunit low > 76
Castellaniella sp019104865 MT123 0.63 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.65 ABCV34_RS01215 acetolactate synthase small subunit low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.70 GFF4277 Acetolactate synthase small subunit (EC 2.2.1.6) low > 90
Ralstonia solanacearum PSI07 0.63 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.72 RPSI07_RS14260 acetolactate synthase small subunit low > 81
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.73 BPHYT_RS06550 acetolactate synthase low > 109
Acidovorax sp. GW101-3H11 0.63 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.70 Ac3H11_526 Acetolactate synthase small subunit (EC 2.2.1.6) 0.68 52
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.73 QEN71_RS24220 acetolactate synthase small subunit low > 153
Desulfovibrio vulgaris Miyazaki F 0.62 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.46 DvMF_0154 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) low > 51
Phaeobacter inhibens DSM 17395 0.60 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.41 PGA1_c20220 acetolactate synthase isozyme 3 small subunit low > 62
Dinoroseobacter shibae DFL-12 0.59 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) 0.37 Dshi_1781 acetolactate synthase, small subunit (RefSeq)
Sinorhizobium meliloti 1021 0.59 SMc04405 3-isopropylmalate dehydrogenase 0.40 SMc01430 acetolactate synthase 3 regulatory subunit 0.85 63
Agrobacterium fabrum C58 0.59 Atu2791 3-isopropylmalate dehydrogenase 0.40 Atu2035 acetolactate synthase, small subunit low > 89
Desulfovibrio vulgaris Hildenborough JW710 0.59 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.45 DVU1377 ilvN-2 acetolactate synthase, small subunit (TIGR) low > 55
Azospirillum sp. SherDot2 0.59 MPMX19_00607 3-isopropylmalate dehydrogenase 0.41 MPMX19_01775 Acetolactate synthase isozyme 3 small subunit
Rhizobium sp. OAE497 0.59 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.39 ABIE40_RS11490 acetolactate synthase small subunit low > 107
Synechococcus elongatus PCC 7942 0.58 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase 0.40 Synpcc7942_2434 ilvH acetolactate synthase 3 regulatory subunit
Rhodospirillum rubrum S1H 0.58 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.42 Rru_A0468 Acetolactate synthase, small subunit (NCBI) 0.84 24
Magnetospirillum magneticum AMB-1 0.56 AMB_RS20570 3-isopropylmalate dehydrogenase 0.42 AMB_RS17745 acetolactate synthase small subunit
Azospirillum brasilense Sp245 0.56 AZOBR_RS14130 3-isopropylmalate dehydrogenase 0.42 AZOBR_RS06565 acetolactate synthase low > 97
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.45 Ga0059261_0067 acetolactate synthase, small subunit (EC 2.2.1.6) 0.97 9
Rhodopseudomonas palustris CGA009 0.55 TX73_001175 3-isopropylmalate dehydrogenase 0.41 TX73_010470 acetolactate synthase small subunit
Enterobacter sp. TBS_079 0.54 MPMX20_00768 3-isopropylmalate dehydrogenase 0.67 MPMX20_00772 Acetolactate synthase isozyme 3 small subunit low > 85
Escherichia coli Nissle 1917 0.54 ECOLIN_RS00395 3-isopropylmalate dehydrogenase 0.68 ECOLIN_RS00420 acetolactate synthase small subunit low > 52
Escherichia fergusonii Becca 0.54 EFB2_03972 3-isopropylmalate dehydrogenase 0.68 EFB2_03968 Acetolactate synthase isozyme 3 small subunit low > 86
Escherichia coli ECOR38 0.54 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase 0.67 HEPCGN_08675 ilvN acetolactate synthase small subunit low > 85
Escherichia coli ECRC102 0.54 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase 0.68 NIAGMN_08545 ilvN acetolactate synthase small subunit
Escherichia coli ECRC101 0.54 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase 0.68 OKFHMN_10695 ilvN acetolactate synthase small subunit
Escherichia coli ECRC98 0.54 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase 0.68 JDDGAC_14290 ilvN acetolactate synthase small subunit
Escherichia coli ECRC101 0.54 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase 0.68 MCAODC_01210 ilvN acetolactate synthase small subunit
Escherichia coli ECRC99 0.54 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase 0.68 KEDOAH_17460 ilvN acetolactate synthase small subunit
Bosea sp. OAE506 0.54 ABIE41_RS11860 3-isopropylmalate dehydrogenase 0.38 ABIE41_RS12905 acetolactate synthase small subunit
Escherichia coli BW25113 0.54 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.67 b0078 ilvH acetolactate synthase small subunit (NCBI) low > 76
Escherichia coli ECOR27 0.54 NOLOHH_03065 leuA 2-isopropylmalate synthase 0.68 NOLOHH_03040 ilvN acetolactate synthase small subunit low > 57
Escherichia coli BL21 0.54 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent 0.67 ECD_00080 acetolactate synthase 3, small subunit, valine-sensitive low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03584 3-isopropylmalate dehydrogenase 0.68 OHPLBJKB_03580 Acetolactate synthase isozyme 3 small subunit low > 73
Escherichia coli ECRC62 0.54 BNILDI_08545 leuA 2-isopropylmalate synthase 0.68 BNILDI_08570 ilvN acetolactate synthase small subunit
Enterobacter asburiae PDN3 0.54 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.66 EX28DRAFT_3674 acetolactate synthase, small subunit (EC 2.2.1.6) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.67 GFF160 Acetolactate synthase small subunit (EC 2.2.1.6) low > 78
Shewanella sp. ANA-3 0.53 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.66 Shewana3_2270 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) low > 73
Rahnella sp. WP5 0.53 EX31_RS03685 3-isopropylmalate dehydrogenase 0.69 EX31_RS03660 acetolactate synthase small subunit low > 89
Shewanella oneidensis MR-1 0.53 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.65 SO2278 ilvH acetolactate synthase III, small subunit (NCBI ptt file)
Klebsiella michiganensis M5al 0.53 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.68 BWI76_RS04700 acetolactate synthase small subunit low > 92
Serratia liquefaciens MT49 0.53 IAI46_03350 3-isopropylmalate dehydrogenase 0.68 IAI46_03380 acetolactate synthase small subunit low > 86
Shewanella amazonensis SB2B 0.53 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.65 Sama_2019 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) low > 62
Shewanella loihica PV-4 0.52 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.67 Shew_1775 acetolactate synthase 3 regulatory subunit (RefSeq) low > 60
Dickeya dianthicola ME23 0.52 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.67 DZA65_RS19180 acetolactate synthase small subunit low > 75
Dickeya dadantii 3937 0.52 DDA3937_RS18120 3-isopropylmalate dehydrogenase 0.67 DDA3937_RS18100 acetolactate synthase small subunit low > 74
Caulobacter crescentus NA1000 0.52 CCNA_00193 3-isopropylmalate dehydrogenase 0.37 CCNA_02186 acetolactate synthase small subunit low > 66
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_00193 3-isopropylmalate dehydrogenase 0.37 CCNA_02186 acetolactate synthase small subunit low > 67
Dickeya dianthicola 67-19 0.52 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.67 HGI48_RS18035 acetolactate synthase small subunit low > 71
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_12600 3-isopropylmalate dehydrogenase 0.68 CSW01_12560 acetolactate synthase small subunit low > 62
Pectobacterium carotovorum WPP14 0.52 HER17_RS03080 3-isopropylmalate dehydrogenase 0.69 HER17_RS03100 acetolactate synthase small subunit low > 75
Alteromonas macleodii MIT1002 0.52 MIT1002_00948 3-isopropylmalate dehydrogenase 0.64 MIT1002_00504 Acetolactate synthase isozyme 3 small subunit 0.99 4
Pantoea sp. MT58 0.50 IAI47_16005 3-isopropylmalate dehydrogenase 0.66 IAI47_15985 acetolactate synthase small subunit low > 76
Erwinia tracheiphila SCR3 0.50 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase 0.66 LU632_RS02890 ilvN acetolactate synthase small subunit low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.46 Echvi_2062 3-isopropylmalate dehydrogenase 0.20 Echvi_2057 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data)
Parabacteroides merdae CL09T00C40 0.43 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.17 HMPREF1078_RS16685 acetolactate synthase small subunit low > 61
Methanococcus maripaludis JJ 0.29 MMJJ_RS02220 3-isopropylmalate dehydrogenase 0.45 MMJJ_RS01645 acetolactate synthase small subunit
Methanococcus maripaludis S2 0.28 MMP_RS02855 3-isopropylmalate dehydrogenase 0.45 MMP_RS03420 acetolactate synthase small subunit
Mycobacterium tuberculosis H37Rv 0.28 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) 0.39 Rv3002c Probable acetolactate synthase (small subunit) IlvN (acetohydroxy-acid synthase) (AHAS) (ALS)
Bifidobacterium breve UCC2003 0.27 BBR_RS12870 3-isopropylmalate dehydrogenase 0.42 BBR_RS12345 acetolactate synthase small subunit low > 34

Not shown: 16 genomes with orthologs for PS417_18585 only; 0 genomes with orthologs for PS417_23805 only