Conservation of cofitness between GFF4290 and GFF3363 in Hydrogenophaga sp. GW460-11-11-14-LB1

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4290 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 1.0 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.82 15
Acidovorax sp. GW101-3H11 0.90 Ac3H11_574 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.90 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.86 7
Variovorax sp. OAS795 0.88 ABID97_RS15365 sulfate adenylyltransferase subunit CysD 0.88 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Variovorax sp. SCN45 0.87 GFF1203 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.89 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 127
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS15565 sulfate adenylyltransferase subunit 2 0.71 HSERO_RS16515 isopropylmalate isomerase 0.90 3
Castellaniella sp019104865 MT123 0.65 ABCV34_RS14115 sulfate adenylyltransferase subunit CysD 0.70 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit low > 48
Ralstonia solanacearum GMI1000 0.64 RS_RS12155 sulfate adenylyltransferase subunit CysD 0.75 RS_RS10000 3-isopropylmalate dehydratase large subunit low > 80
Ralstonia solanacearum PSI07 0.64 RPSI07_RS12790 sulfate adenylyltransferase subunit CysD 0.75 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.48 25
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS00195 sulfate adenylyltransferase subunit CysD 0.76 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit 0.71 23
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS04740 sulfate adenylyltransferase subunit 2 0.74 BPHYT_RS33915 isopropylmalate isomerase 0.78 7
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS04585 sulfate adenylyltransferase subunit CysD 0.75 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum UW163 0.64 UW163_RS09085 sulfate adenylyltransferase subunit CysD 0.75 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS16255 sulfate adenylyltransferase 0.75 RR42_RS14400 isopropylmalate isomerase 0.86 17
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS25240 sulfate adenylyltransferase subunit CysD 0.74 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.81 40
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_00117 sulfate adenylyltransferase subunit 2 0.74 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.61 22
Paraburkholderia graminis OAS925 0.63 ABIE53_001229 sulfate adenylyltransferase subunit 2 0.74 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit 0.90 9
Dechlorosoma suillum PS 0.61 Dsui_1983 sulfate adenylyltransferase, small subunit 0.72 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Pontibacter actiniarum KMM 6156, DSM 19842 0.55 CA264_02545 sulfate adenylyltransferase small subunit 0.52 CA264_09435 3-isopropylmalate dehydratase large subunit low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.54 CA265_RS04115 sulfate adenylyltransferase 0.52 CA265_RS15830 3-isopropylmalate dehydratase large subunit 0.92 21
Mucilaginibacter yixingensis YX-36 DSM 26809 0.53 ABZR88_RS04940 sulfate adenylyltransferase subunit CysD 0.52 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit
Mycobacterium tuberculosis H37Rv 0.52 Rv1285 Probable sulfate adenylyltransferase subunit 2 CysD 0.56 Rv2988c Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI)
Echinicola vietnamensis KMM 6221, DSM 17526 0.51 Echvi_0983 sulfate adenylyltransferase, small subunit 0.48 Echvi_2059 3-isopropylmalate dehydratase, large subunit
Lysobacter sp. OAE881 0.43 ABIE51_RS15820 sulfate adenylyltransferase subunit CysD 0.46 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.92 47
Alteromonas macleodii MIT1002 0.43 MIT1002_01274 Sulfate adenylyltransferase subunit 2 0.56 MIT1002_00947 3-isopropylmalate dehydratase large subunit
Bacteroides ovatus ATCC 8483 0.43 BACOVA_01768 putative sulfate adenylyltransferase subunit 2 0.50 BACOVA_04603 3-isopropylmalate dehydratase, large subunit low > 94
Bacteroides thetaiotaomicron VPI-5482 0.42 BT0414 sulfate adenylyltransferase subunit 2 (NCBI ptt file) 0.50 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.42 HMPREF1058_RS02945 sulfate adenylyltransferase subunit CysD 0.50 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit low > 67
Bacteroides stercoris CC31F 0.42 HMPREF1181_RS04305 sulfate adenylyltransferase subunit CysD 0.50 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit low > 56
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS01705 sulfate adenylyltransferase subunit CysD 0.50 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit low > 61
Phocaeicola dorei CL03T12C01 0.42 ABI39_RS02260 sulfate adenylyltransferase subunit CysD 0.50 ABI39_RS10200 3-isopropylmalate dehydratase large subunit low > 72
Marinobacter adhaerens HP15 0.42 HP15_2462 sulfate adenylyltransferase, small subunit 0.68 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain 0.88 16
Acinetobacter radioresistens SK82 0.41 MPMX26_02326 Sulfate adenylyltransferase subunit 2 0.66 MPMX26_00345 3-isopropylmalate dehydratase large subunit 0.83 12
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_01550 sulfate adenylyltransferase subunit 2 0.64 CCNA_00196 3-isopropylmalate dehydratase large subunit low > 67
Caulobacter crescentus NA1000 0.41 CCNA_01550 sulfate adenylyltransferase subunit 2 0.64 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.88 36
Shewanella loihica PV-4 0.41 Shew_1422 sulfate adenylyltransferase subunit 2 (RefSeq) 0.58 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.76 16
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_2360 sulfate adenylyltransferase, small subunit 0.67 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit low > 40
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS15305 sulfate adenylyltransferase subunit CysD 0.46 A4249_RS10005 3-isopropylmalate dehydratase large subunit 0.99 17
Shewanella sp. ANA-3 0.40 Shewana3_0863 sulfate adenylyltransferase subunit 2 (RefSeq) 0.58 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.90 20
Shewanella oneidensis MR-1 0.40 SO3727 cysD sulfate adenylyltransferase, subunit 2 (NCBI ptt file) 0.58 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.96 11
Dickeya dianthicola 67-19 0.40 HGI48_RS16995 sulfate adenylyltransferase subunit CysD 0.60 HGI48_RS18065 3-isopropylmalate dehydratase large subunit low > 71
Rhodospirillum rubrum S1H 0.40 Rru_A2289 Sulfate adenylyltransferase, small subunit (NCBI) 0.66 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI)
Dickeya dianthicola ME23 0.40 DZA65_RS18070 sulfate adenylyltransferase subunit CysD 0.60 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.70 50
Dickeya dadantii 3937 0.40 DDA3937_RS16925 sulfate adenylyltransferase subunit CysD 0.60 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit low > 74
Pantoea sp. MT58 0.40 IAI47_04180 sulfate adenylyltransferase subunit CysD 0.60 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.81 8
Rahnella sp. WP5 0.40 EX31_RS07880 sulfate adenylyltransferase subunit CysD 0.60 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.94 22
Shewanella amazonensis SB2B 0.40 Sama_2891 sulfate adenylyltransferase subunit 2 (RefSeq) 0.58 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.94 20
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2848 sulfate adenylyltransferase, small subunit 0.59 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.82 22
Klebsiella michiganensis M5al 0.40 BWI76_RS22700 sulfate adenylyltransferase subunit 2 0.59 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.58 31
Enterobacter sp. TBS_079 0.40 MPMX20_03638 Sulfate adenylyltransferase subunit 2 0.59 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.56 25
Escherichia coli ECRC62 0.40 BNILDI_10805 cysD sulfate adenylyltransferase subunit CysD 0.60 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC102 0.40 NIAGMN_18210 cysD sulfate adenylyltransferase subunit CysD 0.59 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECOR27 0.40 NOLOHH_12255 cysD sulfate adenylyltransferase subunit CysD 0.60 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 57
Escherichia coli ECRC101 0.40 OKFHMN_20440 cysD sulfate adenylyltransferase subunit CysD 0.59 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC98 0.40 JDDGAC_24105 cysD sulfate adenylyltransferase subunit CysD 0.59 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_12960 sulfate adenylyltransferase subunit CysD 0.58 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Escherichia coli ECRC99 0.40 KEDOAH_07700 cysD sulfate adenylyltransferase subunit CysD 0.59 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Serratia liquefaciens MT49 0.40 IAI46_03715 sulfate adenylyltransferase subunit CysD 0.59 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_00981 Sulfate adenylyltransferase subunit 2 0.59 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia coli ECRC101 0.40 MCAODC_10965 cysD sulfate adenylyltransferase subunit CysD 0.59 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia fergusonii Becca 0.40 EFB2_01158 Sulfate adenylyltransferase subunit 2 0.60 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli BW25113 0.39 b2752 cysD sulfate adenylyltransferase subunit 2 (NCBI) 0.60 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.88 11
Escherichia coli ECOR38 0.39 HEPCGN_19620 cysD sulfate adenylyltransferase subunit CysD 0.60 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 85
Escherichia coli BL21 0.39 ECD_02602 sulfate adenylyltransferase, subunit 2 0.60 ECD_00074 3-isopropylmalate dehydratase large subunit low > 60
Escherichia coli Nissle 1917 0.39 ECOLIN_RS15385 sulfate adenylyltransferase subunit CysD 0.60 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF4800 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.59 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_01295 cysD sulfate adenylyltransferase subunit CysD 0.47 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit low > 52
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS18865 sulfate adenylyltransferase subunit CysD 0.50 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit low > 74
Pectobacterium carotovorum WPP14 0.39 HER17_RS04285 sulfate adenylyltransferase subunit CysD 0.59 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.88 40
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_16665 sulfate adenylyltransferase 0.69 AO356_21400 isopropylmalate isomerase 0.66 17
Azospirillum sp. SherDot2 0.39 MPMX19_06719 Sulfate adenylyltransferase subunit 2 0.68 MPMX19_01998 3-isopropylmalate dehydratase large subunit low > 112
Erwinia tracheiphila SCR3 0.39 LU632_RS06425 cysD sulfate adenylyltransferase subunit CysD 0.56 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit low > 74
Azospirillum brasilense Sp245 0.39 AZOBR_RS33775 sulfate adenylyltransferase subunit 2 0.66 AZOBR_RS03545 isopropylmalate isomerase low > 97
Pseudomonas sp. RS175 0.39 PFR28_00193 Sulfate adenylyltransferase subunit 2 0.69 PFR28_02824 3-isopropylmalate dehydratase large subunit low > 88
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_5257 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.68 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.53 14
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1058 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.69 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas putida KT2440 0.39 PP_1303 Sulfate adenylyltransferase subunit 2 0.68 PP_1985 3-isopropylmalate dehydratase large subunit 0.52 12
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_05080 sulfate adenylyltransferase 0.68 AO353_20620 isopropylmalate isomerase 0.70 11
Pseudomonas fluorescens SBW25 0.39 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.68 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.68 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4993 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.69 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.75 14
Pseudomonas sp. S08-1 0.39 OH686_08450 Sulfate adenylyltransferase subunit 2 0.66 OH686_04480 3-isopropylmalate dehydratase large subunit
Pseudomonas simiae WCS417 0.39 PS417_03715 sulfate adenylyltransferase subunit 2 0.69 PS417_18600 isopropylmalate isomerase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4128 sulfate adenylyltransferase subunit 2 0.69 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.86 8
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1259.1 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.68 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 74
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4128 sulfate adenylyltransferase subunit 2 0.69 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.76 25
Pseudomonas stutzeri RCH2 0.38 Psest_3294 sulfate adenylyltransferase, small subunit 0.66 Psest_2591 3-isopropylmalate dehydratase, large subunit
Bosea sp. OAE506 0.38 ABIE41_RS15370 sulfate adenylyltransferase subunit CysD 0.63 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Sinorhizobium meliloti 1021 0.38 SM_b21223 sulfate adenylyltransferase subunit 2 0.65 SMc03823 isopropylmalate isomerase large subunit
Rhodanobacter denitrificans MT42 0.38 LRK55_RS05290 sulfate adenylyltransferase subunit CysD 0.56 LRK55_RS07105 3-isopropylmalate dehydratase large subunit
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS05520 sulfate adenylyltransferase subunit CysD 0.56 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Agrobacterium fabrum C58 0.37 Atu0817 sulfate adenylate transferase, subunit 2 0.64 Atu2709 3-isopropylmalate dehydratase, large subunit 0.56 4
Rhizobium sp. OAE497 0.37 ABIE40_RS04470 sulfate adenylyltransferase subunit CysD 0.65 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.85 10
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_4042 sulfate adenylyltransferase, small subunit 0.57 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.89 24
Rhodopseudomonas palustris CGA009 0.28 TX73_003885 sulfate adenylyltransferase subunit 2 0.63 TX73_001245 3-isopropylmalate dehydratase large subunit
Magnetospirillum magneticum AMB-1 0.28 AMB_RS11195 sulfate adenylyltransferase subunit 2 0.61 AMB_RS20560 3-isopropylmalate dehydratase large subunit

Not shown: 0 genomes with orthologs for GFF4290 only; 8 genomes with orthologs for GFF3363 only