Conservation of cofitness between GFF5513 and GFF292 in Variovorax sp. SCN45

103 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 1.0 GFF292 Tol-Pal system beta propeller repeat protein TolB 0.92 18
Variovorax sp. OAS795 0.83 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase 0.96 ABID97_RS16695 Tol-Pal system beta propeller repeat protein TolB
Acidovorax sp. GW101-3H11 0.62 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.85 Ac3H11_2485 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.72 GFF4534 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase 0.56 HSERO_RS06110 translocation protein TolB
Paraburkholderia graminis OAS925 0.52 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 ABIE53_000882 TolB protein
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 H281DRAFT_04719 TolB protein
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 0.56 BPHYT_RS03695 protein TolB
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 QEN71_RS26265 Tol-Pal system beta propeller repeat protein TolB
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS03230 phosphoribosylaminoimidazole carboxylase 0.57 RR42_RS15460 translocation protein TolB
Castellaniella sp019104865 MT123 0.45 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase 0.46 ABCV34_RS09850 Tol-Pal system beta propeller repeat protein TolB
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 RALBFv3_RS12925 translocation protein TolB
Ralstonia solanacearum UW163 0.44 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 UW163_RS00640 translocation protein TolB
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase 0.57 ABZR87_RS08985 Tol-Pal system beta propeller repeat protein TolB
Ralstonia solanacearum GMI1000 0.44 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 RS_RS03700 Tol-Pal system beta propeller repeat protein TolB
Ralstonia solanacearum PSI07 0.43 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 RPSI07_RS20300 Tol-Pal system beta propeller repeat protein TolB
Dechlorosoma suillum PS 0.40 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein 0.56 Dsui_0479 tol-pal system beta propeller repeat protein TolB
Methylophilus sp. DMC18 0.40 GFF1769 N5-carboxyaminoimidazole ribonucleotide synthase 0.49 GFF2332 Tol-Pal system protein TolB
Sinorhizobium meliloti 1021 0.36 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.31 SMc04461 translocation protein TolB
Azospirillum brasilense Sp245 0.35 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase 0.29 AZOBR_RS09075 periplasmic protein of the Tol-Pal system
Rhizobium sp. OAE497 0.35 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase 0.28 ABIE40_RS15600 Tol-Pal system beta propeller repeat protein TolB
Caulobacter crescentus NA1000 0.35 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.28 CCNA_03338 TolB protein
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.28 CCNA_03338 TolB protein
Rhodospirillum rubrum S1H 0.35 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) 0.27 Rru_A1094 TolB protein (NCBI)
Agrobacterium fabrum C58 0.34 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.30 Atu3714 translocation protein TolB
Dinoroseobacter shibae DFL-12 0.34 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.24 Dshi_1111 Tol-Pal system beta propeller repeat TolB (RefSeq)
Bosea sp. OAE506 0.33 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase 0.26 ABIE41_RS09530 Tol-Pal system beta propeller repeat protein TolB
Azospirillum sp. SherDot2 0.33 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase 0.27 MPMX19_00703 Tol-Pal system protein TolB
Rhodopseudomonas palustris CGA009 0.32 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase 0.29 TX73_005755 Tol-Pal system beta propeller repeat protein TolB
Xanthobacter sp. DMC5 0.32 GFF3228 N5-carboxyaminoimidazole ribonucleotide synthase 0.29 GFF69 Tol-Pal system protein TolB
Pseudomonas stutzeri RCH2 0.32 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein 0.36 Psest_1502 tol-pal system beta propeller repeat protein TolB
Pseudomonas segetis P6 0.31 ACVTMO_RS00755 5-(carboxyamino)imidazole ribonucleotide synthase 0.36 ACVTMO_RS08385 tolB Tol-Pal system beta propeller repeat protein TolB
Pseudomonas sp. S08-1 0.31 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase 0.35 OH686_19160 Tol-Pal system beta propeller repeat protein TolB
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase 0.25 A4249_RS15920 Tol-Pal system beta propeller repeat protein TolB
Pseudomonas sp. SVBP6 0.31 COO64_RS01745 5-(carboxyamino)imidazole ribonucleotide synthase 0.36 COO64_RS20125 tolB Tol-Pal system beta propeller repeat protein TolB
Magnetospirillum magneticum AMB-1 0.31 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase 0.28 AMB_RS16220 protein TolB
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase 0.27 Ga0059261_3157 tol-pal system beta propeller repeat protein TolB
Pseudomonas putida KT2440 0.30 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase 0.36 PP_1222 component of the Tol biopolymer transport system
Pseudomonas sp. RS175 0.30 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase 0.36 PFR28_03407 Tol-Pal system protein TolB
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.36 Pf6N2E2_5542 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins
Pseudomonas sp. BP01 0.30 JOY50_RS08825 5-(carboxyamino)imidazole ribonucleotide synthase 0.36 JOY50_RS01790 tolB Tol-Pal system beta propeller repeat protein TolB
Sphingobium sp. HT1-2 0.30 GFF1298 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 0.24 GFF995 Tol-Pal system beta propeller repeat protein TolB
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.37 Psyr_1415 TolB, N-terminal:TolB, N-terminal
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.37 Psyr_1415 TolB, N-terminal:TolB, N-terminal
Lysobacter sp. OAE881 0.29 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase 0.40 ABIE51_RS05085 Tol-Pal system beta propeller repeat protein TolB
Pseudomonas aeruginosa PA14 0.29 IKLFDK_26300 5-(carboxyamino)imidazole ribonucleotide synthase 0.36 IKLFDK_04400 Tol-Pal system beta propeller repeat protein TolB
Phaeobacter inhibens DSM 17395 0.29 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK 0.25 PGA1_c05930 putative protein TolB
Pseudomonas simiae WCS417 0.29 PS417_28115 phosphoribosylaminoimidazole carboxylase 0.35 PS417_22420 translocation protein TolB
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_11075 phosphoribosylaminoimidazole carboxylase 0.36 AO356_18050 translocation protein TolB
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.36 PfGW456L13_1858 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.35 PFLU_RS24060 Tol-Pal system protein TolB
Pseudomonas fluorescens SBW25 0.29 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.35 PFLU_RS24060 Tol-Pal system protein TolB
Pseudomonas lactucae CFBP13502 0.29 GEMAOFIL_00089 N5-carboxyaminoimidazole ribonucleotide synthase 0.35 GEMAOFIL_04636 Tol-Pal system protein TolB
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.39 Xcc-8004.1445.1 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins
Pseudomonas orientalis W4I3 0.28 QF045_RS02475 5-(carboxyamino)imidazole ribonucleotide synthase 0.35 QF045_RS24585 Tol-Pal system beta propeller repeat protein TolB
Acinetobacter baumannii LAC-4 0.28 RR41_RS18910 5-(carboxyamino)imidazole ribonucleotide synthase 0.35 RR41_RS04655 Tol-Pal system beta propeller repeat protein TolB low > 55
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.36 Pf1N1B4_632 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_09935 phosphoribosylaminoimidazole carboxylase 0.35 AO353_03555 translocation protein TolB
Pseudomonas aeruginosa PUPa3 0.28 DQ20_RS57855 5-(carboxyamino)imidazole ribonucleotide synthase 0.36 DQ20_RS45220 tolB;go_component=outer Tol-Pal system beta propeller repeat protein TolB
Pseudomonas sp. DMC3 0.28 GFF485 N5-carboxyaminoimidazole ribonucleotide synthase 0.36 GFF5179 Tol-Pal system protein TolB
Pseudomonas aeruginosa MRSN321 0.28 DY961_RS25395 5-(carboxyamino)imidazole ribonucleotide synthase 0.36 DY961_RS07570 tolB;go_component=outer Tol-Pal system beta propeller repeat protein TolB
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.38 OKGIIK_01875 tolB Tol-Pal system beta propeller repeat protein TolB
Acinetobacter radioresistens SK82 0.28 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase 0.36 MPMX26_02194 Tol-Pal system protein TolB low > 36
Rhodanobacter sp000427505 FW510-R12 0.28 LRK53_RS14785 5-(carboxyamino)imidazole ribonucleotide synthase 0.38 LRK53_RS05155 Tol-Pal system beta propeller repeat protein TolB
Rhodanobacter denitrificans MT42 0.26 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase 0.38 LRK55_RS04655 Tol-Pal system beta propeller repeat protein TolB
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase 0.39 ABZR86_RS10805 Tol-Pal system beta propeller repeat protein TolB
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase 0.38 LRK54_RS04875 Tol-Pal system beta propeller repeat protein TolB
Marinobacter adhaerens HP15 0.25 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.38 HP15_2035 translocation protein TolB precursor
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.35 CSW01_09195 protein TolB
Kangiella aquimarina DSM 16071 0.24 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase 0.35 B158DRAFT_1141 tol-pal system beta propeller repeat protein TolB
Klebsiella pneumoniae MKP103 0.23 KDGMDA_15000 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 KDGMDA_16790 Tol-Pal system protein TolB low > 95
Klebsiella michiganensis M5al 0.23 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 BWI76_RS08535 translocation protein TolB low > 92
Alteromonas macleodii MIT1002 0.22 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.38 MIT1002_01338 translocation protein TolB
Escherichia coli ECRC62 0.22 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 BNILDI_21235 tolB Tol-Pal system protein TolB low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.32 GFF4654 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins low > 78
Escherichia coli Nissle 1917 0.22 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 ECOLIN_RS03940 Tol-Pal system beta propeller repeat protein TolB low > 55
Rahnella sp. WP5 0.22 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.34 EX31_RS23495 Tol-Pal system protein TolB low > 89
Enterobacter asburiae PDN3 0.22 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein 0.31 EX28DRAFT_2251 tol-pal system beta propeller repeat protein TolB
Escherichia coli BW25113 0.22 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.32 b0740 tolB translocation protein TolB precursor (NCBI) low > 76
Escherichia coli ECOR38 0.22 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 HEPCGN_01465 tolB Tol-Pal system protein TolB low > 88
Escherichia coli BL21 0.22 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.32 ECD_00700 periplasmic protein
Escherichia fergusonii Becca 0.22 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase 0.32 EFB2_03366 Tol-Pal system protein TolB low > 86
Escherichia coli ECOR27 0.22 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 NOLOHH_23240 tolB Tol-Pal system protein TolB low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase 0.32 OHPLBJKB_02973 Protein TolB low > 74
Escherichia coli ECRC102 0.21 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 NIAGMN_04855 tolB Tol-Pal system protein TolB low > 80
Escherichia coli ECRC99 0.21 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 KEDOAH_21160 tolB Tol-Pal system protein TolB
Enterobacter sp. TBS_079 0.21 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.31 MPMX20_01369 Tol-Pal system protein TolB low > 85
Escherichia coli ECRC100 0.21 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 OKFHMN_06805 tolB Tol-Pal system protein TolB low > 79
Escherichia coli ECRC98 0.21 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 JDDGAC_10460 tolB Tol-Pal system protein TolB 0.61 49
Escherichia coli ECRC101 0.21 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 MCAODC_26025 tolB Tol-Pal system protein TolB 0.42 74
Pantoea agglomerans CFBP13505 P0401 0.21 PagCFBP13505_RS10855 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 PagCFBP13505_RS03620 Tol-Pal system protein TolB
Pantoea sp. MT58 0.21 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 IAI47_13685 Tol-Pal system protein TolB low > 76
Erwinia amylovora T8 0.21 OLJFJH_17635 5-(carboxyamino)imidazole ribonucleotide synthase 0.31 OLJFJH_16910 Tol-Pal system protein TolB
Serratia liquefaciens MT49 0.20 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.33 IAI46_06335 Tol-Pal system protein TolB
Dickeya dianthicola 67-19 0.20 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.33 HGI48_RS06560 Tol-Pal system protein TolB
Shewanella oneidensis MR-1 0.20 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.38 SO2748 tolB tolB protein (NCBI ptt file)
Dickeya dadantii 3937 0.20 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 DDA3937_RS06515 Tol-Pal system protein TolB
Dickeya dianthicola ME23 0.20 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 DZA65_RS06910 Tol-Pal system protein TolB
Pectobacterium carotovorum WPP14 0.20 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.33 HER17_RS14865 Tol-Pal system beta propeller repeat protein TolB
Shewanella sp. ANA-3 0.19 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.38 Shewana3_2531 TolB domain-containing protein (RefSeq)
Erwinia tracheiphila HP pepo 2.2 0.19 IJEDHG_01025 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 IJEDHG_02085 tolB Tol-Pal system protein TolB
Erwinia tracheiphila SCR3 0.19 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.32 LU632_RS16030 tolB Tol-Pal system beta propeller repeat protein TolB
Shewanella amazonensis SB2B 0.19 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.37 Sama_2086 tolB protein (RefSeq)
Shewanella loihica PV-4 0.19 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.38 Shew_1527 TolB domain-containing protein (RefSeq)

Not shown: 9 genomes with orthologs for GFF5513 only; 2 genomes with orthologs for GFF292 only