Conservation of cofitness between PGA1_c17440 and PGA1_c18700 in Phaeobacter inhibens DSM 17395

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c17440 putative peroxiredoxin Bcp 1.0 PGA1_c18700 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region 0.27 12
Dinoroseobacter shibae DFL-12 0.62 Dshi_1178 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq) 0.45 Dshi_1837 carbohydrate kinase, YjeF related protein (RefSeq) low > 64
Azospirillum sp. SherDot2 0.61 MPMX19_01989 Putative peroxiredoxin bcp 0.29 MPMX19_01552 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 112
Agrobacterium fabrum C58 0.58 Atu1830 bacterioferritin comigratory protein 0.19 Atu1768 hypothetical protein low > 89
Azospirillum brasilense Sp245 0.57 AZOBR_RS05790 alkyl hydroperoxide reductase 0.27 AZOBR_RS07115 hypothetical protein low > 97
Caulobacter crescentus NA1000 0.57 CCNA_01947 thioredoxin peroxidase 0.24 CCNA_02043 sugar kinase low > 66
Rhizobium sp. OAE497 0.57 ABIE40_RS10040 peroxiredoxin 0.25 ABIE40_RS09345 NAD(P)H-hydrate dehydratase low > 107
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_01947 thioredoxin peroxidase 0.24 CCNA_02043 sugar kinase low > 67
Bosea sp. OAE506 0.56 ABIE41_RS17030 peroxiredoxin 0.24 ABIE41_RS16885 NAD(P)H-hydrate dehydratase low > 77
Sinorhizobium meliloti 1021 0.56 SMc00524 bacterioferritin comigratory protein 0.21 SMc00946 hypothetical protein low > 103
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS08905 peroxiredoxin 0.13 BPHYT_RS09505 carbohydrate kinase 0.16 80
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_2443 Peroxiredoxin 0.12 B158DRAFT_1947 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region low > 40
Magnetospirillum magneticum AMB-1 0.49 AMB_RS13500 peroxiredoxin 0.22 AMB_RS14075 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 64
Paraburkholderia graminis OAS925 0.49 ABIE53_002015 peroxiredoxin Q/BCP 0.12 ABIE53_002139 hydroxyethylthiazole kinase-like uncharacterized protein yjeF low > 113
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_00800 peroxiredoxin Q/BCP 0.12 H281DRAFT_00907 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region low > 103
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS22455 peroxiredoxin 0.13 QEN71_RS21930 NAD(P)H-hydrate dehydratase low > 153
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_1546 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 0.14 Psyr_0567 Protein of unknown function UPF0031:YjeF-related protein, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_1546 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 0.14 Psyr_0567 Protein of unknown function UPF0031:YjeF-related protein, N-terminal low > 86
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_3330 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 0.16 Pf1N1B4_1417 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 87
Ralstonia solanacearum GMI1000 0.47 RS_RS06605 peroxiredoxin 0.13 RS_RS08700 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.3088.1 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 0.09 Xcc-8004.2253.1 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 74
Synechococcus elongatus PCC 7942 0.46 Synpcc7942_1806 prxQ-A2 bacterioferritin comigratory protein 0.08 Synpcc7942_1273 hypothetical protein low > 38
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS15825 peroxiredoxin 0.14 RALBFv3_RS01295 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 76
Ralstonia solanacearum UW163 0.46 UW163_RS13270 peroxiredoxin 0.14 UW163_RS14605 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS11395 peroxiredoxin 0.13 ABZR87_RS12740 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 80
Castellaniella sp019104865 MT123 0.46 ABCV34_RS02280 peroxiredoxin 0.23 ABCV34_RS02980 NAD(P)H-hydrate dehydratase low > 48
Ralstonia solanacearum PSI07 0.46 RPSI07_RS17540 peroxiredoxin 0.13 RPSI07_RS16180 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 81
Dechlorosoma suillum PS 0.46 Dsui_1997 Peroxiredoxin 0.05 Dsui_2898 yjeF-like protein, hydroxyethylthiazole kinase-related protein
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4509 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 0.15 PfGW456L13_159 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 87
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_3495 Peroxiredoxin 0.15 Ga0059261_0649 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region low > 68
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_17660 peroxiredoxin 0.14 AO353_13120 carbohydrate kinase low > 101
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS12555 alkyl hydroperoxide reductase 0.09 RR42_RS09070 carbohydrate kinase low > 128
Marinobacter adhaerens HP15 0.45 HP15_2028 protein containing alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen domain 0.15 HP15_2504 carbohydrate kinase, YjeF related protein low > 73
Pseudomonas sp. RS175 0.45 PFR28_00697 Peroxiredoxin Bcp 0.16 PFR28_05116 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 88
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS15175 thioredoxin-dependent thiol peroxidase 0.16 CA265_RS24885 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 88
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_04540 peroxiredoxin 0.17 AO356_08680 carbohydrate kinase low > 104
Pseudomonas sp. S08-1 0.44 OH686_19205 Thiol peroxidase, Bcp-type 0.15 OH686_09495 NAD(P)H-hydrate epimerase / ADP-dependent (S)-NAD(P)H-hydrate dehydratase low > 80
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_2749 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 0.16 Pf6N2E2_3619 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 103
Pseudomonas stutzeri RCH2 0.44 Psest_1513 Peroxiredoxin 0.17 Psest_0678 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region low > 67
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1510 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 0.10 Ac3H11_415 NAD(P)HX epimerase / NAD(P)HX dehydratase
Echinicola vietnamensis KMM 6221, DSM 17526 0.43 Echvi_2928 Peroxiredoxin 0.15 Echvi_0073 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region low > 79
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS00775 peroxiredoxin 0.14 ABZR86_RS00840 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF3932 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 0.08 GFF4918 NAD(P)HX epimerase / NAD(P)HX dehydratase
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_11945 peroxiredoxin 0.16 CA264_16280 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 74
Variovorax sp. OAS795 0.41 ABID97_RS10875 peroxiredoxin 0.09 ABID97_RS17190 NAD(P)H-hydrate dehydratase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS01685 thioredoxin-dependent thiol peroxidase 0.16 ABZR88_RS18865 NAD(P)H-hydrate dehydratase low > 71
Rhodanobacter denitrificans MT42 0.41 LRK55_RS14790 peroxiredoxin 0.14 LRK55_RS14850 NAD(P)H-hydrate dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS15075 peroxiredoxin 0.14 LRK54_RS15135 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 59
Lysobacter sp. OAE881 0.41 ABIE51_RS07985 peroxiredoxin 0.11 ABIE51_RS08050 NAD(P)H-hydrate dehydratase low > 62
Variovorax sp. SCN45 0.41 GFF2805 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 0.09 GFF397 NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136)
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS10410 alkyl hydroperoxide reductase 0.12 HSERO_RS11180 sugar kinase low > 78
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_03845 bcp peroxiredoxin 0.12 OKGIIK_03905 Bifunctional NAD(P)H-hydrate repair enzyme low > 52
Mycobacterium tuberculosis H37Rv 0.38 Rv2521 Probable bacterioferritin comigratory protein Bcp 0.09 Rv3433c Conserved protein low > 58
Acinetobacter radioresistens SK82 0.38 MPMX26_02177 Peroxiredoxin 0.08 MPMX26_01782 Bifunctional NAD(P)H-hydrate repair enzyme Nnr
Pantoea sp. MT58 0.38 IAI47_05255 thioredoxin-dependent thiol peroxidase 0.12 IAI47_02565 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_01249 Peroxiredoxin Bcp 0.12 OHPLBJKB_03875 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 73
Shewanella loihica PV-4 0.37 Shew_1846 redoxin domain-containing protein (RefSeq) 0.11 Shew_0561 carbohydrate kinase, YjeF-related protein (RefSeq)
Escherichia coli BL21 0.37 ECD_02372 peroxiredoxin; thiol peroxidase, thioredoxin-dependent 0.12 ECD_04034 bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase
Rahnella sp. WP5 0.37 EX31_RS22730 thioredoxin-dependent thiol peroxidase 0.11 EX31_RS08845 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase 0.43 3
Escherichia coli ECRC101 0.37 MCAODC_12435 bcp thioredoxin-dependent thiol peroxidase 0.12 MCAODC_02795 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF2178 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 0.12 GFF820 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 78
Escherichia fergusonii Becca 0.37 EFB2_01406 Peroxiredoxin Bcp 0.12 EFB2_04368 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 86
Escherichia coli ECRC101 0.37 OKFHMN_21905 bcp thioredoxin-dependent thiol peroxidase 0.12 OKFHMN_12280 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Escherichia coli ECRC98 0.37 JDDGAC_25850 bcp thioredoxin-dependent thiol peroxidase 0.12 JDDGAC_15920 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Escherichia coli ECOR27 0.37 NOLOHH_13565 bcp thioredoxin-dependent thiol peroxidase 0.12 NOLOHH_04545 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Escherichia coli Nissle 1917 0.37 ECOLIN_RS14155 thioredoxin-dependent thiol peroxidase 0.12 ECOLIN_RS24205 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_10765 thioredoxin-dependent thiol peroxidase 0.10 CSW01_14940 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 62
Escherichia coli ECRC102 0.37 NIAGMN_19675 bcp thioredoxin-dependent thiol peroxidase 0.12 NIAGMN_10130 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Escherichia coli ECRC99 0.37 KEDOAH_06315 bcp thioredoxin-dependent thiol peroxidase 0.12 KEDOAH_15875 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Escherichia coli ECRC62 0.37 BNILDI_12375 bcp thioredoxin-dependent thiol peroxidase 0.12 BNILDI_06945 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Erwinia tracheiphila SCR3 0.37 LU632_RS08315 bcp thioredoxin-dependent thiol peroxidase 0.12 LU632_RS02030 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 74
Escherichia coli BW25113 0.37 b2480 bcp thioredoxin-dependent thiol peroxidase (NCBI) 0.12 b4167 yjeF predicted carbohydrate kinase (NCBI) low > 76
Escherichia coli ECOR38 0.37 HEPCGN_21075 bcp thioredoxin-dependent thiol peroxidase 0.12 HEPCGN_10510 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 85
Enterobacter asburiae PDN3 0.36 EX28DRAFT_0180 Peroxiredoxin 0.12 EX28DRAFT_3364 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region 0.63 54
Klebsiella michiganensis M5al 0.36 BWI76_RS20915 peroxiredoxin 0.13 BWI76_RS02510 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 92
Enterobacter sp. TBS_079 0.36 MPMX20_03342 Peroxiredoxin Bcp 0.12 MPMX20_00448 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 85
Dickeya dadantii 3937 0.36 DDA3937_RS06055 thioredoxin-dependent thiol peroxidase 0.10 DDA3937_RS18635 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 74
Shewanella amazonensis SB2B 0.35 Sama_1910 bcp thioredoxin-dependent thiol peroxidase (RefSeq) 0.12 Sama_3030 YjeF protein (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.35 HER17_RS15425 thioredoxin-dependent thiol peroxidase 0.11 HER17_RS02560 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 75
Serratia liquefaciens MT49 0.35 IAI46_18790 thioredoxin-dependent thiol peroxidase 0.11 IAI46_01600 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 86
Dickeya dianthicola 67-19 0.35 HGI48_RS06100 thioredoxin-dependent thiol peroxidase 0.12 HGI48_RS18570 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase 0.66 7
Dickeya dianthicola ME23 0.35 DZA65_RS06450 thioredoxin-dependent thiol peroxidase 0.11 DZA65_RS19705 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 75
Bacteroides stercoris CC31F 0.35 HMPREF1181_RS11905 thioredoxin-dependent thiol peroxidase 0.17 HMPREF1181_RS06260 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 56
Alteromonas macleodii MIT1002 0.34 MIT1002_02209 Putative peroxiredoxin bcp 0.12 MIT1002_03793 Nicotinamide nucleotide repair protein low > 70
Bacteroides ovatus ATCC 8483 0.34 BACOVA_05403 antioxidant, AhpC/TSA family 0.16 BACOVA_05215 YjeF domain protein low > 94
Shewanella oneidensis MR-1 0.33 SO1877 bcp bacterioferritin comigratory protein (NCBI ptt file) 0.12 SO0598 yjeF yjeF protein (NCBI ptt file) low > 76
Bacteroides thetaiotaomicron VPI-5482 0.33 BT4611 putative bacterioferritin co-migratory protein (NCBI ptt file) 0.16 BT4383 putative sugar kinase (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS00100 thioredoxin-dependent thiol peroxidase 0.15 HMPREF1078_RS15325 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 61
Shewanella sp. ANA-3 0.33 Shewana3_1654 bcp thioredoxin-dependent thiol peroxidase (RefSeq) 0.12 Shewana3_0592 carbohydrate kinase, YjeF related protein (RefSeq) low > 73
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS11935 thioredoxin-dependent thiol peroxidase 0.17 ABI39_RS08310 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 72
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS15970 thioredoxin-dependent thiol peroxidase 0.16 HMPREF1058_RS00705 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 67

Not shown: 7 genomes with orthologs for PGA1_c17440 only; 2 genomes with orthologs for PGA1_c18700 only