Conservation of cofitness between PS417_03925 and PS417_07115 in Pseudomonas simiae WCS417

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_03925 nicotinate-nucleotide pyrophosphorylase 1.0 PS417_07115 L-aspartate oxidase 0.77 2
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.96 PFLU_RS07225 L-aspartate oxidase 0.64 2
Pseudomonas fluorescens SBW25 0.99 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.96 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_1153 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.94 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) 0.56 3
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_05520 nicotinate-nucleotide pyrophosphorylase 0.94 AO353_17620 L-aspartate oxidase 0.79 2
Pseudomonas sp. RS175 0.92 PFR28_00098 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.95 PFR28_00689 L-aspartate oxidase 0.73 2
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_5082 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.94 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) 0.72 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.92 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.92 Psyr_3959 L-aspartate oxidase 0.74 5
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_3346 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.91 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) 0.69 2
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_07370 nicotinate-nucleotide pyrophosphorylase 0.94 AO356_04580 L-aspartate oxidase low > 104
Pseudomonas putida KT2440 0.86 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer 0.89 PP_1426 L-aspartate oxidase 0.62 29
Pseudomonas stutzeri RCH2 0.83 Psest_0718 nicotinate-nucleotide pyrophosphorylase 0.84 Psest_3101 L-aspartate oxidase 0.37 54
Pseudomonas sp. S08-1 0.78 OH686_16520 nicotinate-nucleotide diphosphorylase (carboxylating) 0.89 OH686_20040 L-aspartate oxidase 0.68 28
Marinobacter adhaerens HP15 0.71 HP15_1305 nicotinate-nucleotide pyrophosphorylase 0.71 HP15_774 L-aspartate oxidase — —
Shewanella amazonensis SB2B 0.56 Sama_0371 nicotinate-nucleotide diphosphorylase (carboxylating) (RefSeq) 0.65 Sama_0873 L-aspartate oxidase (RefSeq) — —
Dechlorosoma suillum PS 0.56 Dsui_2901 nicotinate-nucleotide pyrophosphorylase 0.64 Dsui_2452 L-aspartate oxidase — —
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_12265 carboxylating nicotinate-nucleotide diphosphorylase 0.66 CSW01_12495 L-aspartate oxidase low > 62
Shewanella loihica PV-4 0.54 Shew_3435 nicotinate-nucleotide pyrophosphorylase (RefSeq) 0.65 Shew_1047 L-aspartate oxidase (RefSeq) — —
Acinetobacter radioresistens SK82 0.54 MPMX26_00042 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.64 MPMX26_02162 L-aspartate oxidase 0.71 2
Shewanella sp. ANA-3 0.53 Shewana3_0422 nicotinate-nucleotide pyrophosphorylase [carboxylating] (RefSeq) 0.65 Shewana3_3033 L-aspartate oxidase (RefSeq) — —
Dickeya dadantii 3937 0.53 DDA3937_RS17955 carboxylating nicotinate-nucleotide diphosphorylase 0.65 DDA3937_RS15770 L-aspartate oxidase 0.97 1
Alteromonas macleodii MIT1002 0.53 MIT1002_03008 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.61 MIT1002_02720 L-aspartate oxidase — —
Dickeya dianthicola ME23 0.52 DZA65_RS19035 carboxylating nicotinate-nucleotide diphosphorylase 0.65 DZA65_RS16935 L-aspartate oxidase 0.97 1
Pectobacterium carotovorum WPP14 0.52 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase 0.65 HER17_RS05775 L-aspartate oxidase 0.99 1
Dickeya dianthicola 67-19 0.52 HGI48_RS17890 carboxylating nicotinate-nucleotide diphosphorylase 0.65 HGI48_RS15855 L-aspartate oxidase 0.62 20
Rahnella sp. WP5 0.52 EX31_RS03515 carboxylating nicotinate-nucleotide diphosphorylase 0.64 EX31_RS21795 L-aspartate oxidase 0.77 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF130 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.63 GFF2106 L-aspartate oxidase (EC 1.4.3.16) low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF1217 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.60 GFF1214 L-aspartate oxidase (EC 1.4.3.16) 0.49 34
Castellaniella sp019104865 MT123 0.51 ABCV34_RS03695 carboxylating nicotinate-nucleotide diphosphorylase 0.56 ABCV34_RS03690 L-aspartate oxidase low > 48
Ralstonia solanacearum PSI07 0.51 RPSI07_RS12655 nicotinate-nucleotide diphosphorylase (carboxylating) 0.64 RPSI07_RS12660 L-aspartate oxidase low > 81
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS00350 carboxylating nicotinate-nucleotide diphosphorylase 0.64 ABZR87_RS00345 L-aspartate oxidase 0.91 2
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS04730 nicotinate-nucleotide diphosphorylase (carboxylating) 0.64 RALBFv3_RS04725 L-aspartate oxidase low > 76
Ralstonia solanacearum UW163 0.50 UW163_RS08940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.64 UW163_RS08945 L-aspartate oxidase — —
Acidovorax sp. GW101-3H11 0.50 Ac3H11_3838 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.57 Ac3H11_3824 L-aspartate oxidase (EC 1.4.3.16) 0.85 5
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS17015 nicotinate-nucleotide pyrophosphorylase 0.63 RR42_RS17010 L-aspartate oxidase low > 128
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS11070 nicotinate-nucleotide pyrophosphorylase 0.62 HSERO_RS11085 L-aspartate oxidase 0.87 2
Serratia liquefaciens MT49 0.49 IAI46_03530 carboxylating nicotinate-nucleotide diphosphorylase 0.66 IAI46_19590 L-aspartate oxidase low > 86
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS03065 carboxylating nicotinate-nucleotide diphosphorylase 0.64 QEN71_RS03070 L-aspartate oxidase 0.94 2
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2135 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.66 B158DRAFT_2179 L-aspartate oxidase (EC 1.4.3.16) — —
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS15645 nicotinate-nucleotide pyrophosphorylase 0.63 BPHYT_RS15640 L-aspartate oxidase 0.93 2
Pantoea sp. MT58 0.48 IAI47_15845 carboxylating nicotinate-nucleotide diphosphorylase 0.65 IAI47_04845 L-aspartate oxidase 0.78 2
Variovorax sp. OAS795 0.48 ABID97_RS07410 carboxylating nicotinate-nucleotide diphosphorylase 0.59 ABID97_RS07440 L-aspartate oxidase 0.91 2
Paraburkholderia graminis OAS925 0.48 ABIE53_003293 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.63 ABIE53_003292 L-aspartate oxidase 0.86 2
Enterobacter sp. TBS_079 0.48 MPMX20_00800 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.63 MPMX20_03445 L-aspartate oxidase 0.71 1
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3702 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.64 EX28DRAFT_0071 L-aspartate oxidase (EC 1.4.3.16) 0.73 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_03552 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.63 OHPLBJKB_01133 L-aspartate oxidase low > 73
Escherichia coli ECOR27 0.48 NOLOHH_02875 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.63 NOLOHH_13045 nadB L-aspartate oxidase low > 57
Escherichia coli BW25113 0.48 b0109 nadC nicotinate-nucleotide pyrophosphorylase (NCBI) 0.63 b2574 nadB L-aspartate oxidase (NCBI) 0.87 2
Escherichia coli BL21 0.48 ECD_00108 quinolinate phosphoribosyltransferase 0.63 ECD_02468 quinolinate synthase, L-aspartate oxidase (B protein) subunit low > 60
Escherichia coli ECOR38 0.48 HEPCGN_08510 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.63 HEPCGN_20515 nadB L-aspartate oxidase low > 85
Escherichia coli ECRC101 0.48 MCAODC_01045 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.63 MCAODC_11900 nadB L-aspartate oxidase — —
Escherichia coli ECRC99 0.48 KEDOAH_17625 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.63 KEDOAH_06850 nadB L-aspartate oxidase — —
Escherichia coli ECRC102 0.48 NIAGMN_08380 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.63 NIAGMN_19140 nadB L-aspartate oxidase — —
Escherichia coli ECRC62 0.48 BNILDI_08735 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.63 BNILDI_11845 nadB L-aspartate oxidase — —
Escherichia coli ECRC98 0.48 JDDGAC_14125 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.63 JDDGAC_25035 nadB L-aspartate oxidase — —
Escherichia coli ECRC101 0.48 OKFHMN_10530 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.63 OKFHMN_21370 nadB L-aspartate oxidase — —
Escherichia fergusonii Becca 0.48 EFB2_03940 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.62 EFB2_01322 L-aspartate oxidase low > 86
Escherichia coli Nissle 1917 0.48 ECOLIN_RS00585 carboxylating nicotinate-nucleotide diphosphorylase 0.63 ECOLIN_RS14570 L-aspartate oxidase low > 52
Ralstonia solanacearum GMI1000 0.47 RS_RS12290 nicotinate-nucleotide diphosphorylase (carboxylating) 0.64 RS_RS12285 L-aspartate oxidase low > 80
Klebsiella michiganensis M5al 0.47 BWI76_RS04845 nicotinate-nucleotide pyrophosphorylase 0.63 BWI76_RS21360 L-aspartate oxidase 0.89 1
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04070 nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.63 H281DRAFT_04069 L-aspartate oxidase 0.91 1
Variovorax sp. SCN45 0.45 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.61 GFF2580 L-aspartate oxidase (EC 1.4.3.16) 0.54 41
Magnetospirillum magneticum AMB-1 0.40 AMB_RS19655 nicotinate-nucleotide diphosphorylase (carboxylating) 0.59 AMB_RS19650 L-aspartate oxidase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_16940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.14 CA264_10795 succinate dehydrogenase flavoprotein subunit — —
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS11900 carboxylating nicotinate-nucleotide diphosphorylase 0.44 ABI39_RS05945 L-aspartate oxidase — —
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS15940 carboxylating nicotinate-nucleotide diphosphorylase 0.44 HMPREF1058_RS11085 L-aspartate oxidase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_1158 nicotinate-nucleotide pyrophosphorylase 0.13 Echvi_2795 succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup — —
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS16725 carboxylating nicotinate-nucleotide diphosphorylase 0.44 HMPREF1078_RS06605 L-aspartate oxidase — —
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS14530 nicotinate-nucleotide diphosphorylase (carboxylating) 0.46 CA265_RS21185 L-aspartate oxidase 0.64 1
Caulobacter crescentus NA1000 0.37 CCNA_03009 nicotinate-nucleotide pyrophosphorylase 0.21 CCNA_03007 L-aspartate oxidase — —
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_03009 nicotinate-nucleotide pyrophosphorylase 0.21 CCNA_03007 L-aspartate oxidase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_005415 carboxylating nicotinate-nucleotide diphosphorylase 0.25 TX73_005420 L-aspartate oxidase — —
Rhodospirillum rubrum S1H 0.36 Rru_A1432 Nicotinate-nucleotide pyrophosphorylase (NCBI) 0.25 Rru_A1433 L-aspartate oxidase (NCBI) 0.86 9
Bacteroides ovatus ATCC 8483 0.36 BACOVA_04303 nicotinate-nucleotide diphosphorylase (carboxylating) 0.43 BACOVA_02888 L-aspartate oxidase 0.83 41
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS10745 carboxylating nicotinate-nucleotide diphosphorylase 0.43 HMPREF1181_RS01800 L-aspartate oxidase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS00635 carboxylating nicotinate-nucleotide diphosphorylase 0.21 A4249_RS00630 L-aspartate oxidase low > 48
Agrobacterium fabrum C58 0.36 Atu4096 nicotinate-nucleotide pyrophosphorylase 0.24 Atu4097 L-aspartate oxidase 0.94 2
Bifidobacterium breve UCC2003 0.35 BBR_RS16720 nicotinate-nucleotide diphosphorylase (carboxylating) 0.25 BBR_RS16725 L-aspartate oxidase 0.20 2
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_0061 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.55 Ga0059261_2248 L-aspartate oxidase (EC 1.4.3.16) — —
Bacteroides thetaiotaomicron VPI-5482 0.35 BT1560 nicotinate-nucleotide pyrophosphorylase (NCBI ptt file) 0.43 BT3184 L-aspartate oxidase (NCBI ptt file) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS15695 carboxylating nicotinate-nucleotide diphosphorylase 0.45 ABZR88_RS20645 L-aspartate oxidase — —
Azospirillum sp. SherDot2 0.35 MPMX19_05672 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.25 MPMX19_05671 L-aspartate oxidase — —
Sinorhizobium meliloti 1021 0.34 SMc02598 nicotinate-nucleotide pyrophosphorylase carboxylating protein 0.28 SMc02599 L-aspartate oxidase 0.21 26
Phaeobacter inhibens DSM 17395 0.33 PGA1_c27810 nicotinate-nucleotide pyrophosphorylase 0.21 PGA1_c27800 L-aspartate oxidase NadB 0.73 2
Mycobacterium tuberculosis H37Rv 0.32 Rv1596 Probable nicotinate-nucleotide pyrophosphatase NadC 0.24 Rv1595 Probable L-aspartate oxidase NadB — —
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_0951 nadC nicotinate-nucleotide pyrophosphorylase 0.34 Synpcc7942_1881 nadB L-aspartate oxidase 0.63 5
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU1807 nadC nicotinate-nucleotide pyrophosphorylase (TIGR) 0.35 DVU1809 nadB L-aspartate oxidase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_0524 nicotinate-nucleotide pyrophosphorylase (RefSeq) 0.35 DvMF_0526 L-aspartate oxidase (RefSeq) — —
Methanococcus maripaludis S2 0.26 MMP_RS04560 carboxylating nicotinate-nucleotide diphosphorylase 0.25 MMP_RS06565 fumarate reductase subunit A — —
Methanococcus maripaludis JJ 0.26 MMJJ_RS00575 carboxylating nicotinate-nucleotide diphosphorylase 0.25 MMJJ_RS07785 fumarate reductase subunit A — —

Not shown: 9 genomes with orthologs for PS417_03925 only; 2 genomes with orthologs for PS417_07115 only