Conservation of cofitness between CSW01_01045 and CSW01_11535 in Vibrio cholerae E7946 ATCC 55056

103 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01045 DNA helicase RecQ 1.0 CSW01_11535 thiamine-phosphate kinase 0.66 8
Klebsiella pneumoniae MKP103 0.67 KDGMDA_09735 ATP-dependent DNA helicase RecQ 0.50 KDGMDA_14455 thiamine-phosphate kinase — —
Escherichia coli ECRC98 0.67 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ 0.49 JDDGAC_12095 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC101 0.67 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ 0.49 MCAODC_27665 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC100 0.67 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ 0.49 OKFHMN_08440 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC99 0.67 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ 0.49 KEDOAH_19525 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC62 0.67 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ 0.49 BNILDI_22800 thiL thiamine-phosphate kinase — —
Escherichia coli ECOR27 0.67 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ 0.49 NOLOHH_01385 thiL thiamine-phosphate kinase — —
Escherichia coli ECOR38 0.67 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ 0.49 HEPCGN_07065 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC102 0.67 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ 0.49 NIAGMN_06495 thiL thiamine-phosphate kinase — —
Pantoea sp. MT58 0.67 IAI47_18360 ATP-dependent DNA helicase RecQ 0.50 IAI47_14755 thiamine-phosphate kinase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ 0.49 OHPLBJKB_03259 Thiamine-monophosphate kinase — —
Escherichia coli BW25113 0.67 b3822 recQ ATP-dependent DNA helicase (NCBI) 0.49 b0417 thiL thiamine monophosphate kinase (NCBI) — —
Escherichia coli Nissle 1917 0.67 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ 0.49 ECOLIN_RS02520 thiamine-phosphate kinase — —
Escherichia fergusonii Becca 0.67 EFB2_04815 ATP-dependent DNA helicase RecQ 0.49 EFB2_03640 Thiamine-monophosphate kinase — —
Escherichia coli BL21 0.66 ECD_03701 ATP-dependent DNA helicase 0.49 ECD_00365 thiamine monophosphate kinase — —
Klebsiella michiganensis M5al 0.66 BWI76_RS01245 DNA helicase RecQ 0.49 BWI76_RS06365 thiamine-monophosphate kinase — —
Erwinia tracheiphila SCR3 0.66 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ 0.48 LU632_RS18610 thiL thiamine-phosphate kinase — —
Dickeya dianthicola 67-19 0.66 HGI48_RS20005 ATP-dependent DNA helicase RecQ 0.48 HGI48_RS05580 thiamine-phosphate kinase — —
Serratia liquefaciens MT49 0.66 IAI46_00770 ATP-dependent DNA helicase RecQ 0.49 IAI46_04910 thiamine-phosphate kinase — —
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS15340 ATP-dependent DNA helicase RecQ 0.50 PagCFBP13505_RS10440 thiamine-phosphate kinase — —
Erwinia amylovora T8 0.66 OLJFJH_06445 ATP-dependent DNA helicase RecQ 0.49 OLJFJH_18075 thiamine-phosphate kinase — —
Dickeya dianthicola ME23 0.66 DZA65_RS21045 ATP-dependent DNA helicase RecQ 0.48 DZA65_RS05905 thiamine-phosphate kinase — —
Dickeya dadantii 3937 0.66 DDA3937_RS19850 ATP-dependent DNA helicase RecQ 0.50 DDA3937_RS05520 thiamine-phosphate kinase — —
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_08740 recQ ATP-dependent DNA helicase RecQ 0.48 IJEDHG_26015 thiL thiamine-phosphate kinase — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ 0.50 EX28DRAFT_2553 thiamine-phosphate kinase — —
Enterobacter sp. TBS_079 0.66 MPMX20_04458 ATP-dependent DNA helicase RecQ 0.50 MPMX20_01009 Thiamine-monophosphate kinase — —
Rahnella sp. WP5 0.65 EX31_RS15210 ATP-dependent DNA helicase RecQ 0.49 EX31_RS22140 thiamine-phosphate kinase — —
Pectobacterium carotovorum WPP14 0.65 HER17_RS01395 ATP-dependent DNA helicase RecQ 0.49 HER17_RS15945 thiamine-phosphate kinase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF248 ATP-dependent DNA helicase RecQ 0.48 GFF4321 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Shewanella sp. ANA-3 0.59 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) 0.48 Shewana3_1101 thiamine-monophosphate kinase (RefSeq) — —
Shewanella oneidensis MR-1 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) 0.47 SO3464 thiL thiamin-monophosphate kinase (NCBI ptt file) — —
Shewanella loihica PV-4 0.58 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.47 Shew_1192 thiamine-monophosphate kinase (RefSeq) — —
Shewanella amazonensis SB2B 0.57 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) 0.46 Sama_1021 thiamine-phosphate kinase (RefSeq) — —
Alteromonas macleodii MIT1002 0.54 MIT1002_00148 ATP-dependent DNA helicase RecQ 0.49 MIT1002_02695 Thiamine-monophosphate kinase — —
Xanthobacter sp. DMC5 0.47 GFF753 ATP-dependent DNA helicase RecQ 0.22 GFF581 Thiamine-monophosphate kinase — —
Pseudomonas sp. SVBP6 0.46 COO64_RS21845 recQ DNA helicase RecQ 0.33 COO64_RS15865 thiL thiamine-phosphate kinase — —
Pseudomonas aeruginosa PA14 0.45 IKLFDK_17145 DNA helicase RecQ 0.31 IKLFDK_20885 thiamine-phosphate kinase — —
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS00140 recQ;go_function=DNA DNA helicase RecQ 0.31 DY961_RS27720 thiL;go_function=thiamine-phosphate thiamine-phosphate kinase — —
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS40870 recQ;go_function=DNA DNA helicase RecQ 0.31 DQ20_RS47925 thiL;go_function=thiamine-phosphate thiamine-phosphate kinase — —
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.33 PfGW456L13_1318 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Marinobacter adhaerens HP15 0.45 HP15_1718 ATP-dependent DNA helicase RecQ 0.28 HP15_496 thiamine-monophosphate kinase — —
Pseudomonas sp. RS175 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ 0.33 PFR28_03944 Thiamine-monophosphate kinase — —
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS19925 DNA helicase RecQ 0.37 ABZR86_RS10645 thiamine-phosphate kinase — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_04050 ATP-dependent DNA helicase RecQ 0.31 AO356_14955 thiamine monophosphate kinase — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS13000 DNA helicase RecQ 0.36 LRK54_RS04570 thiamine-phosphate kinase — —
Pseudomonas sp. S08-1 0.45 OH686_20670 ATP-dependent DNA helicase RecQ 0.31 OH686_15720 thiamine-phosphate kinase — —
Pseudomonas segetis P6 0.45 MPMX49_02936 ATP-dependent DNA helicase RecQ 0.34 MPMX49_00995 Thiamine-monophosphate kinase — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ 0.31 Pf6N2E2_4924 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS12700 DNA helicase RecQ 0.36 LRK55_RS04345 thiamine-phosphate kinase — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ 0.33 Pf1N1B4_2654 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_07560 DNA helicase RecQ 0.18 CA264_02015 thiamine-phosphate kinase — —
Pseudomonas sp. DMC3 0.44 GFF2380 ATP-dependent DNA helicase RecQ 0.32 GFF3832 Thiamine-monophosphate kinase — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.33 Psyr_4457 thiamine-phosphate kinase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.33 Psyr_4457 thiamine-phosphate kinase — —
Pseudomonas sp. BP01 0.44 JOY50_RS01155 recQ DNA helicase RecQ 0.31 JOY50_RS20100 thiL thiamine-phosphate kinase — —
Pseudomonas putida KT2440 0.44 PP_4516 ATP-dependent DNA 3 0.31 PP_0519 thiamin monophosphate kinase — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_18430 ATP-dependent DNA helicase RecQ 0.31 AO353_06690 thiamine monophosphate kinase — —
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS21920 DNA helicase RecQ 0.32 PFLU_RS26875 thiamine-phosphate kinase — —
Pseudomonas lactucae CFBP13502 0.44 GEMAOFIL_04187 ATP-dependent DNA helicase RecQ 0.32 GEMAOFIL_05153 Thiamine-monophosphate kinase — —
Pseudomonas orientalis W4I3 0.44 QF045_RS22070 DNA helicase RecQ 0.32 QF045_RS27205 thiamine-phosphate kinase — —
Pseudomonas simiae WCS417 0.44 PS417_19950 ATP-dependent DNA helicase RecQ 0.31 PS417_25240 thiamine monophosphate kinase — —
Rhodanobacter sp000427505 FW510-R12 0.44 LRK53_RS15600 DNA helicase RecQ 0.36 LRK53_RS05440 thiamine-phosphate kinase — —
Variovorax sp. OAS795 0.44 ABID97_RS03395 DNA helicase RecQ 0.33 ABID97_RS04870 thiamine-phosphate kinase — —
Pseudomonas fluorescens SBW25 0.44 PFLU_RS21920 DNA helicase RecQ 0.32 PFLU_RS26875 thiamine-phosphate kinase — —
Pseudomonas stutzeri RCH2 0.44 Psest_1869 ATP-dependent DNA helicase RecQ 0.32 Psest_3547 thiamine-monophosphate kinase — —
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_02375 recQ DNA helicase RecQ 0.36 OKGIIK_11395 thiL thiamine-phosphate kinase — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.35 HSERO_RS16830 thiamine monophosphate kinase — —
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ 0.28 Xcc-8004.4386.1 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Methylophilus sp. DMC18 0.43 GFF2139 ATP-dependent DNA helicase RecQ 0.32 GFF837 Thiamine-monophosphate kinase — —
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS28295 DNA helicase RecQ 0.33 QEN71_RS27045 thiamine-phosphate kinase — —
Paraburkholderia graminis OAS925 0.43 ABIE53_003792 ATP-dependent DNA helicase RecQ 0.34 ABIE53_003544 thiamine-monophosphate kinase — —
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS18145 ATP-dependent DNA helicase RecQ 0.31 BPHYT_RS16885 thiamine monophosphate kinase — —
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS02880 DNA helicase RecQ 0.31 ABZR87_RS01570 thiamine-phosphate kinase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS20865 DNA helicase RecQ 0.17 ABZR88_RS20925 thiamine-phosphate kinase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_0784 ATP-dependent DNA helicase RecQ 0.20 Echvi_0088 thiamine-monophosphate kinase — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_06595 ATP-dependent DNA helicase RecQ 0.32 H281DRAFT_06307 thiamine-phosphate kinase — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ 0.31 RR42_RS17615 thiamine monophosphate kinase — —
Ralstonia solanacearum GMI1000 0.42 RS_RS15155 DNA helicase RecQ 0.34 RS_RS13850 thiamine-phosphate kinase — —
Dechlorosoma suillum PS 0.42 Dsui_3092 ATP-dependent DNA helicase RecQ 0.29 Dsui_0712 thiamine-monophosphate kinase — —
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10025 DNA helicase RecQ 0.33 RPSI07_RS11340 thiamine-phosphate kinase — —
Ralstonia solanacearum UW163 0.42 UW163_RS06400 DNA helicase RecQ 0.34 UW163_RS07720 thiamine-phosphate kinase — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS07220 DNA helicase RecQ 0.34 RALBFv3_RS05905 thiamine-phosphate kinase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF1958 ATP-dependent DNA helicase RecQ 0.30 GFF3093 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Azospirillum brasilense Sp245 0.42 AZOBR_RS02840 ATP-dependent DNA helicase RecQ 0.26 AZOBR_RS10050 thiamine-monophosphate kinase — —
Lysobacter sp. OAE881 0.42 ABIE51_RS05145 DNA helicase RecQ 0.34 ABIE51_RS04660 thiamine-phosphate kinase — —
Variovorax sp. SCN45 0.42 GFF6415 ATP-dependent DNA helicase RecQ 0.33 GFF6265 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3308 ATP-dependent DNA helicase RecQ 0.35 Ac3H11_749 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Rhodopseudomonas palustris CGA009 0.41 TX73_025080 DNA helicase RecQ 0.21 TX73_014145 thiamine-phosphate kinase — —
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14585 DNA helicase RecQ 0.17 HMPREF1058_RS12880 thiamine-phosphate kinase 0.50 20
Bosea sp. OAE506 0.41 ABIE41_RS04160 DNA helicase RecQ 0.22 ABIE41_RS19740 thiamine-phosphate kinase — —
Azospirillum sp. SherDot2 0.41 MPMX19_00123 ATP-dependent DNA helicase RecQ 0.27 MPMX19_00731 Thiamine-monophosphate kinase — —
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10235 DNA helicase RecQ 0.16 ABI39_RS07910 thiamine-phosphate kinase 0.50 33
Rhodospirillum rubrum S1H 0.40 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) 0.23 Rru_A1820 Thiamine-monophosphate kinase (NCBI) — —
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS01195 DNA helicase RecQ 0.16 HMPREF1078_RS13035 thiamine-phosphate kinase — —
Castellaniella sp019104865 MT123 0.40 ABCV34_RS07985 DNA helicase RecQ 0.29 ABCV34_RS10120 thiamine-phosphate kinase — —
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS14110 DNA helicase RecQ 0.16 HMPREF1181_RS07645 thiamine-phosphate kinase low > 56
Cellulophaga baltica 18 0.39 M666_RS16920 DNA helicase RecQ 0.17 M666_RS05690 thiamine-phosphate kinase — —
Bacteroides thetaiotaomicron VPI-5482 0.39 BT1848 ATP-dependent DNA helicase recQ (NCBI ptt file) 0.17 BT1882 putative thiamine-monophosphate kinase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.38 BACOVA_04594 ATP-dependent DNA helicase RecQ 0.17 BACOVA_02937 thiamine-phosphate kinase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS14575 DNA helicase RecQ 0.20 A4249_RS06005 thiamine-phosphate kinase — —
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS08905 DNA helicase RecQ 0.15 CA265_RS21170 thiamine-phosphate kinase — —
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_03578 ATP-dependent DNA helicase recQ 0.19 CCNA_01423 thiamine-monophosphate kinase — —
Caulobacter crescentus NA1000 0.35 CCNA_03578 ATP-dependent DNA helicase recQ 0.19 CCNA_01423 thiamine-monophosphate kinase — —

Not shown: 10 genomes with orthologs for CSW01_01045 only; 8 genomes with orthologs for CSW01_11535 only