Conservation of cofitness between CSW01_13695 and CSW01_02840 in Vibrio cholerae E7946 ATCC 55056

102 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13695 two-component system response regulator OmpR 1.0 CSW01_02840 DNA mismatch repair protein MutS 0.73 12
Rahnella sp. WP5 0.86 EX31_RS04800 two-component system response regulator OmpR 0.70 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Serratia liquefaciens MT49 0.86 IAI46_23790 two-component system response regulator OmpR 0.70 IAI46_03800 DNA mismatch repair protein MutS low > 87
Escherichia coli ECOR38 0.85 HEPCGN_15845 ompR_G63V two-component system response regulator OmpR 0.68 HEPCGN_19705 mutS DNA mismatch repair protein MutS 0.60 59
Erwinia tracheiphila SCR3 0.85 LU632_RS22940 ompR two-component system response regulator OmpR 0.69 LU632_RS06485 mutS DNA mismatch repair protein MutS low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF613 Two-component system response regulator OmpR 0.69 GFF4773 DNA mismatch repair protein MutS low > 78
Escherichia coli ECRC62 0.85 BNILDI_02695 ompR_G63V two-component system response regulator OmpR 0.68 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Pantoea sp. MT58 0.85 IAI47_01820 two-component system response regulator OmpR 0.70 IAI47_04240 DNA mismatch repair protein MutS low > 76
Dickeya dianthicola 67-19 0.85 HGI48_RS19750 two-component system response regulator OmpR 0.70 HGI48_RS05230 DNA mismatch repair protein MutS low > 71
Dickeya dianthicola ME23 0.85 DZA65_RS20840 two-component system response regulator OmpR 0.70 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Escherichia coli ECRC99 0.85 KEDOAH_11105 ompR_G63V two-component system response regulator OmpR 0.68 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Klebsiella pneumoniae MKP103 0.85 KDGMDA_06980 two-component system response regulator OmpR 0.70 KDGMDA_03170 DNA mismatch repair protein MutS low > 95
Enterobacter asburiae PDN3 0.85 EX28DRAFT_4138 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.69 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Escherichia coli Nissle 1917 0.85 ECOLIN_RS19455 two-component system response regulator OmpR 0.68 ECOLIN_RS15275 DNA mismatch repair protein MutS low > 55
Escherichia coli ECRC100 0.85 OKFHMN_17035 ompR_G63V two-component system response regulator OmpR 0.68 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 79
Escherichia coli ECRC98 0.85 JDDGAC_20665 ompR_G63V two-component system response regulator OmpR 0.68 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 87
Dickeya dadantii 3937 0.85 DDA3937_RS19620 two-component system response regulator OmpR 0.70 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Pantoea agglomerans CFBP13505 P0401 0.85 PagCFBP13505_RS18340 two-component system response regulator OmpR 0.70 PagCFBP13505_RS16730 DNA mismatch repair protein MutS low > 74
Klebsiella michiganensis M5al 0.85 BWI76_RS26665 DNA-binding response regulator 0.69 BWI76_RS22600 DNA mismatch repair protein MutS low > 92
Escherichia coli ECOR27 0.85 NOLOHH_08825 ompR_G63V two-component system response regulator OmpR 0.68 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 76
Erwinia tracheiphila HP pepo 2.2 0.85 IJEDHG_11955 ompR_G63V two-component system response regulator OmpR 0.69 IJEDHG_17505 mutS DNA mismatch repair protein MutS low > 61
Escherichia coli ECRC101 0.85 MCAODC_07565 ompR_G63V two-component system response regulator OmpR 0.68 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00298 Transcriptional regulatory protein OmpR 0.68 OHPLBJKB_01000 DNA mismatch repair protein MutS low > 74
Pectobacterium carotovorum WPP14 0.85 HER17_RS01700 two-component system response regulator OmpR 0.70 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Escherichia coli ECRC102 0.85 NIAGMN_14805 ompR_G63V two-component system response regulator OmpR 0.68 NIAGMN_18295 mutS DNA mismatch repair protein MutS low > 80
Escherichia fergusonii Becca 0.85 EFB2_00423 Transcriptional regulatory protein OmpR 0.68 EFB2_01179 DNA mismatch repair protein MutS low > 86
Escherichia coli BW25113 0.85 b3405 ompR osmolarity response regulator (NCBI) 0.68 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_04292 Transcriptional regulatory protein OmpR 0.69 MPMX20_03619 DNA mismatch repair protein MutS low > 85
Erwinia amylovora T8 0.85 OLJFJH_04160 two-component system response regulator OmpR 0.69 OLJFJH_09385 DNA mismatch repair protein MutS low > 58
Escherichia coli BL21 0.85 ECD_03257 response regulator in two-component regulatory system with EnvZ 0.68 ECD_02583 methyl-directed mismatch repair protein low > 61
Shewanella loihica PV-4 0.81 Shew_3637 ompR osmolarity response regulator (RefSeq) 0.66 Shew_1214 DNA mismatch repair protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.80 Shewana3_4017 ompR osmolarity response regulator (RefSeq) 0.65 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) low > 73
Shewanella amazonensis SB2B 0.80 Sama_3510 ompR osmolarity response regulator (RefSeq) 0.64 Sama_1045 DNA mismatch repair protein MutS (RefSeq) low > 62
Shewanella oneidensis MR-1 0.80 SO4633 ompR transcriptional regulatory protein OmpR (NCBI ptt file) 0.64 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.79 MIT1002_03968 Transcriptional regulatory protein OmpR 0.61 MIT1002_00953 DNA mismatch repair protein MutS low > 70
Kangiella aquimarina DSM 16071 0.77 B158DRAFT_0684 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.51 B158DRAFT_1529 DNA mismatch repair protein MutS low > 40
Pseudomonas segetis P6 0.74 MPMX49_00771 Transcriptional regulatory protein OmpR 0.55 MPMX49_03425 DNA mismatch repair protein MutS low > 75
Pseudomonas sp. S08-1 0.73 OH686_11095 Two-component system response regulator OmpR 0.56 OH686_18195 DNA mismatch repair protein MutS low > 80
Pseudomonas sp. SVBP6 0.72 COO64_RS00700 ompR two-component system response regulator OmpR 0.56 COO64_RS19805 mutS DNA mismatch repair protein MutS low > 93
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_1772 Two-component system response regulator OmpR 0.55 Pf1N1B4_3117 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_427 Two-component system response regulator OmpR 0.55 PfGW456L13_4672 DNA mismatch repair protein MutS low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0258 Two-component response regulator OmpR 0.56 Psyr_1376 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_3905 Two-component system response regulator OmpR 0.56 Pf6N2E2_3035 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_10170 chemotaxis protein CheY 0.56 AO356_05875 DNA mismatch repair protein MutS low > 104
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0258 Two-component response regulator OmpR 0.56 Psyr_1376 DNA mismatch repair protein MutS — —
Pseudomonas sp. RS175 0.72 PFR28_04868 Transcriptional regulatory protein OmpR 0.56 PFR28_00429 DNA mismatch repair protein MutS low > 88
Pseudomonas orientalis W4I3 0.72 QF045_RS04300 two-component system response regulator OmpR 0.55 QF045_RS08605 DNA mismatch repair protein MutS low > 93
Pseudomonas sp. DMC3 0.72 GFF4183 Transcriptional regulatory protein OmpR 0.55 GFF2086 DNA mismatch repair protein MutS low > 89
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_11745 chemotaxis protein CheY 0.56 AO353_16625 DNA mismatch repair protein MutS — —
Pseudomonas lactucae CFBP13502 0.71 GEMAOFIL_00461 Transcriptional regulatory protein OmpR 0.55 GEMAOFIL_01323 DNA mismatch repair protein MutS — —
Pseudomonas sp. BP01 0.71 JOY50_RS18350 ompR two-component system response regulator OmpR 0.55 JOY50_RS23765 mutS DNA mismatch repair protein MutS 0.59 45
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS01280 two-component system response regulator OmpR 0.55 PFLU_RS05765 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens SBW25 0.71 PFLU_RS01280 two-component system response regulator OmpR 0.55 PFLU_RS05765 DNA mismatch repair protein MutS — —
Pseudomonas simiae WCS417 0.71 PS417_01170 chemotaxis protein CheY 0.55 PS417_05680 DNA mismatch repair protein MutS — —
Pseudomonas putida KT2440 0.71 PP_0246 two-component system DNA-binding response transcriptional dual regulator 0.56 PP_1626 DNA mismatch repair protein MutS low > 96
Pseudomonas stutzeri RCH2 0.70 Psest_3995 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.56 Psest_2875 DNA mismatch repair protein MutS low > 67
Pseudomonas aeruginosa PUPa3 0.70 DQ20_RS50245 amgR;inference=COORDINATES two-component system response regulator AmgR 0.57 DQ20_RS42250 mutS;go_function=ATP DNA mismatch repair protein MutS — —
Pseudomonas aeruginosa PA14 0.70 IKLFDK_27475 two-component system response regulator AmgR 0.57 IKLFDK_18480 DNA mismatch repair protein MutS low > 98
Pseudomonas aeruginosa MRSN321 0.70 DY961_RS11870 amgR;inference=COORDINATES two-component system response regulator AmgR 0.57 DY961_RS14875 mutS;go_function=ATP DNA mismatch repair protein MutS — —
Acinetobacter radioresistens SK82 0.67 MPMX26_02838 Transcriptional regulatory protein OmpR 0.44 MPMX26_01954 DNA mismatch repair protein MutS low > 36
Acinetobacter baumannii LAC-4 0.67 RR41_RS01390 two-component system response regulator OmpR 0.46 RR41_RS10460 DNA mismatch repair protein MutS — —
Acidovorax sp. GW101-3H11 0.65 Ac3H11_343 Two-component system response regulator OmpR 0.44 Ac3H11_3641 DNA mismatch repair protein MutS — —
Methylophilus sp. DMC18 0.64 GFF2713 Transcriptional regulatory protein OmpR 0.51 GFF439 DNA mismatch repair protein MutS — —
Variovorax sp. OAS795 0.63 ABID97_RS17265 two-component system response regulator OmpR 0.42 ABID97_RS20815 DNA mismatch repair protein MutS low > 91
Variovorax sp. SCN45 0.63 GFF408 Two-component system response regulator OmpR 0.42 GFF6634 DNA mismatch repair protein MutS low > 127
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS09315 chemotaxis protein CheY 0.47 BPHYT_RS12475 DNA mismatch repair protein MutS low > 109
Paraburkholderia graminis OAS925 0.62 ABIE53_002101 two-component system phosphate regulon response regulator OmpR 0.47 ABIE53_002719 DNA mismatch repair protein MutS low > 113
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_00886 two component transcriptional regulator, winged helix family 0.47 H281DRAFT_00537 DNA mismatch repair protein MutS low > 103
Dechlorosoma suillum PS 0.61 Dsui_2401 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.49 Dsui_2244 DNA mismatch repair protein MutS low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF4930 Two-component system response regulator OmpR 0.42 GFF3599 DNA mismatch repair protein MutS low > 90
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS22030 two-component system response regulator OmpR 0.46 QEN71_RS06085 DNA mismatch repair protein MutS low > 153
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS07885 chemotaxis protein CheY 0.47 RR42_RS06285 DNA mismatch repair protein MutS low > 128
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS01415 two-component system response regulator OmpR 0.47 RALBFv3_RS14920 DNA mismatch repair protein MutS low > 76
Ralstonia solanacearum PSI07 0.60 RPSI07_RS16070 two-component system response regulator OmpR 0.48 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Ralstonia solanacearum GMI1000 0.60 RS_RS08305 two-component system response regulator OmpR 0.47 RS_RS05735 DNA mismatch repair protein MutS — —
Castellaniella sp019104865 MT123 0.60 ABCV34_RS08585 two-component system response regulator OmpR 0.44 ABCV34_RS00270 DNA mismatch repair protein MutS — —
Ralstonia solanacearum UW163 0.60 UW163_RS14725 two-component system response regulator OmpR 0.47 UW163_RS12390 DNA mismatch repair protein MutS — —
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS10760 chemotaxis protein CheY 0.47 HSERO_RS16360 DNA mismatch repair protein MutS — —
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS13210 two-component system response regulator OmpR 0.49 ABZR87_RS10580 DNA mismatch repair protein MutS low > 80
Bosea sp. OAE506 0.46 ABIE41_RS08395 response regulator 0.30 ABIE41_RS03650 DNA mismatch repair protein MutS low > 77
Rhodopseudomonas palustris CGA009 0.45 TX73_018505 response regulator 0.33 TX73_002655 DNA mismatch repair protein MutS low > 86
Magnetospirillum magneticum AMB-1 0.45 AMB_RS16915 DNA-binding response regulator 0.32 AMB_RS01455 DNA mismatch repair protein MutS low > 64
Azospirillum sp. SherDot2 0.44 MPMX19_00010 Transcriptional regulatory protein OmpR 0.32 MPMX19_00908 DNA mismatch repair protein MutS low > 112
Azospirillum brasilense Sp245 0.44 AZOBR_RS00555 chemotaxis protein CheY 0.31 AZOBR_RS02125 DNA mismatch repair protein MutS low > 97
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_0871 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.33 Ga0059261_3784 DNA mismatch repair protein MutS low > 68
Sinorhizobium meliloti 1021 0.41 SM_b21561 two component response regulator protein 0.32 SMc01125 DNA mismatch repair protein MutS low > 103
Xanthobacter sp. DMC5 0.41 GFF2161 Transcriptional regulatory protein OmpR 0.31 GFF3848 DNA mismatch repair protein MutS — —
Rhizobium sp. OAE497 0.41 ABIE40_RS24305 response regulator 0.33 ABIE40_RS01775 DNA mismatch repair protein MutS low > 107
Marinobacter adhaerens HP15 0.41 HP15_3961 two-component transcriptional regulator, winged helix family 0.57 HP15_1047 DNA mismatch repair protein MutS low > 73
Sphingobium sp. HT1-2 0.41 GFF511 DNA-binding response regulator 0.30 GFF4191 DNA mismatch repair protein MutS low > 95
Dinoroseobacter shibae DFL-12 0.41 Dshi_4048 two component transcriptional regulator, winged helix family (RefSeq) 0.33 Dshi_3466 DNA mismatch repair protein MutS (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.40 PGA1_c34130 protein PetR 0.32 PGA1_c35000 DNA mismatch repair protein MutS — —
Lysobacter sp. OAE881 0.40 ABIE51_RS14390 response regulator 0.52 ABIE51_RS07785 DNA mismatch repair protein MutS low > 62
Synechocystis sp000284455 PCC 6803 0.37 SGL_RS11370 response regulator transcription factor 0.32 SGL_RS08315 DNA mismatch repair protein MutS — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS21025 response regulator transcription factor 0.52 ABZR86_RS00630 DNA mismatch repair protein MutS low > 74
Agrobacterium fabrum C58 0.37 Atu2206 two component response regulator 0.33 Atu0345 DNA mismatch repair protein, MutS family — —
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01240 two-component response regulator 0.29 CCNA_00012 DNA mismatch repair protein MutS low > 67
Caulobacter crescentus NA1000 0.37 CCNA_01240 two-component response regulator 0.29 CCNA_00012 DNA mismatch repair protein MutS low > 66
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_1453 rpaB two component transcriptional regulator, winged helix family 0.33 Synpcc7942_2247 mutS DNA mismatch repair protein — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.974.1 two-component system regulatory protein 0.49 Xcc-8004.3760.1 DNA mismatch repair protein MutS low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS10315 response regulator transcription factor 0.28 A4249_RS12110 DNA mismatch repair protein MutS low > 48
Cellulophaga baltica 18 0.34 M666_RS17080 response regulator transcription factor 0.34 M666_RS07920 DNA mismatch repair protein MutS low > 67
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS04550 response regulator transcription factor 0.35 HMPREF1078_RS06455 DNA mismatch repair protein MutS — —

Not shown: 1 genomes with orthologs for CSW01_13695 only; 17 genomes with orthologs for CSW01_02840 only