| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_04590 | | transcriptional regulator GcvA | 1.0 | CSW01_00290 | | gamma carbonic anhydrase family protein | 0.53 | 20 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.73 | GFF4865 | | Glycine cleavage system transcriptional activator GcvA | 0.67 | GFF2399 | | carbonic anhydrase, family 3 | low | > 78 |
| Serratia liquefaciens MT49 | 0.72 | IAI46_20340 | | transcriptional regulator GcvA | 0.66 | IAI46_23235 | | gamma carbonic anhydrase family protein | low | > 86 |
| Rahnella sp. WP5 | 0.72 | EX31_RS13110 | | transcriptional regulator GcvA | 0.66 | EX31_RS15945 | | gamma carbonic anhydrase family protein | low | > 89 |
| Shewanella amazonensis SB2B | 0.72 | Sama_2429 | | DNA-binding transcriptional activator GcvA (RefSeq) | 0.70 | Sama_0054 | | carbonic anhydrase (RefSeq) | low | > 62 |
| Erwinia amylovora T8 | 0.72 | OLJFJH_09170 | | Glycine cleavage system transcriptional activator | 0.63 | OLJFJH_03675 | | gamma carbonic anhydrase family protein | low | > 58 |
| Escherichia fergusonii Becca | 0.72 | EFB2_01109 | | Glycine cleavage system transcriptional activator | 0.65 | EFB2_00544 | | Protein YrdA | low | > 86 |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_23785 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.65 | JDDGAC_21195 | yrdA | Protein YrdA | low | > 86 |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS15650 | | glycine cleavage system transcriptional regulator GcvA | 0.65 | ECOLIN_RS18830 | | gamma carbonic anhydrase family protein | low | > 55 |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_17890 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.65 | NIAGMN_15335 | yrdA | Protein YrdA | — | — |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_12000 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.65 | NOLOHH_09365 | yrdA | Protein YrdA | low | > 75 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_10505 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.65 | BNILDI_02155 | yrdA | Protein YrdA | low | > 75 |
| Escherichia coli ECRC101 | 0.72 | MCAODC_10645 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.65 | MCAODC_08095 | yrdA | Protein YrdA | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_00923 | | Glycine cleavage system transcriptional activator | 0.65 | OHPLBJKB_00424 | | Protein YrdA | low | > 73 |
| Escherichia coli BW25113 | 0.72 | b2808 | gcvA | DNA-binding transcriptional dual regulator (NCBI) | 0.65 | b3279 | yrdA | putative transferase (VIMSS) | low | > 76 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_08010 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.65 | KEDOAH_10575 | yrdA | Protein YrdA | — | — |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_19375 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.65 | HEPCGN_16395 | yrdA | Protein YrdA | low | > 87 |
| Escherichia coli BL21 | 0.72 | ECD_02659 | | glycine cleavage system transcriptional activator; autorepressor | 0.65 | ECD_03130 | | bacterial transferase hexapeptide domain protein | low | > 61 |
| Escherichia coli ECRC100 | 0.72 | OKFHMN_20120 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.65 | OKFHMN_17575 | yrdA | Protein YrdA | low | > 80 |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS06255 | | transcriptional regulator GcvA | 0.64 | LU632_RS22435 | | gamma carbonic anhydrase family protein | low | > 74 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_03671 | | Glycine cleavage system transcriptional activator | 0.66 | MPMX20_04187 | | Protein YrdA | low | > 85 |
| Pantoea sp. MT58 | 0.71 | IAI47_04025 | | transcriptional regulator GcvA | 0.64 | IAI47_02325 | | gamma carbonic anhydrase family protein | low | > 76 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS22955 | | transcriptional regulator GcvA | 0.67 | BWI76_RS25635 | | gamma carbonic anhydrase family protein | low | > 92 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS05050 | | transcriptional regulator GcvA | 0.64 | DDA3937_RS19090 | | gamma carbonic anhydrase family protein | low | > 74 |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_2883 | | Transcriptional regulator | 0.65 | EX28DRAFT_0048 | | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | low | > 76 |
| Dickeya dianthicola ME23 | 0.71 | DZA65_RS05390 | | transcriptional regulator GcvA | 0.63 | DZA65_RS20305 | | gamma carbonic anhydrase family protein | low | > 75 |
| Dickeya dianthicola 67-19 | 0.71 | HGI48_RS05050 | | transcriptional regulator GcvA | 0.63 | HGI48_RS19180 | | gamma carbonic anhydrase family protein | low | > 71 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_2894 | | DNA-binding transcriptional activator GcvA (RefSeq) | 0.69 | Shewana3_0045 | | carbonic anhydrase (RefSeq) | — | — |
| Pectobacterium carotovorum WPP14 | 0.71 | HER17_RS16415 | | transcriptional regulator GcvA | 0.63 | HER17_RS02260 | | gamma carbonic anhydrase family protein | low | > 75 |
| Shewanella loihica PV-4 | 0.71 | Shew_2764 | | DNA-binding transcriptional activator GcvA (RefSeq) | 0.67 | Shew_3725 | | carbonic anhydrase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.70 | SO1533 | | glycine cleavage system transcriptional activator, putative (NCBI ptt file) | 0.70 | SO0042 | | carbonic anhydrase, family 3 (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.65 | MIT1002_01520 | | Gcv operon activator | 0.68 | MIT1002_00030 | | carnitine operon protein CaiE | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.53 | B158DRAFT_0909 | | Transcriptional regulator | 0.55 | B158DRAFT_0464 | | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | — | — |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_01055 | | Glycine cleavage system transcriptional activator | 0.42 | MPMX19_03844 | | Protein YrdA | low | > 112 |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS20105 | | transcriptional regulator | 0.41 | AZOBR_RS07800 | | carbonic anhydrase | low | > 97 |
| Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_1560 | | Glycine cleavage system transcriptional activator GcvA | 0.68 | Pf6N2E2_4090 | | carbonic anhydrase, family 3 | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.37 | ABIE53_001336 | | LysR family glycine cleavage system transcriptional activator | 0.33 | ABIE53_002757 | | carbonic anhydrase/acetyltransferase-like protein (isoleucine patch superfamily) | — | — |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A2214 | | Transcriptional Regulator, LysR family (NCBI) | 0.43 | Rru_A2420 | | transferase hexapeptide repeat (NCBI) | low | > 58 |
| Caulobacter crescentus NA1000 | 0.37 | CCNA_01174 | | LysR-family transcriptional regulator | 0.36 | CCNA_02726 | | gamma carbonic anhydrase family protein | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.37 | CCNA_01174 | | LysR-family transcriptional regulator | 0.36 | CCNA_02726 | | gamma carbonic anhydrase family protein | 0.55 | 52 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.36 | A4249_RS09680 | | transcriptional regulator GcvA | 0.29 | A4249_RS02210 | | gamma carbonic anhydrase family protein | low | > 48 |
| Ralstonia solanacearum GMI1000 | 0.35 | RS_RS13815 | | transcriptional regulator GcvA | 0.31 | RS_RS05640 | | gamma carbonic anhydrase family protein | low | > 80 |
| Agrobacterium fabrum C58 | 0.34 | Atu2078 | | transcriptional regulator, LysR family | 0.29 | Atu1517 | | hypothetical protein | low | > 89 |
| Pseudomonas sp. SVBP6 | 0.34 | COO64_RS14470 | gcvA | transcriptional regulator GcvA | 0.66 | COO64_RS02330 | | gamma carbonic anhydrase family protein | low | > 93 |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS11810 | | LysR family transcriptional regulator | 0.33 | BPHYT_RS12655 | | anhydrase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.34 | ABZR87_RS01495 | | transcriptional regulator GcvA | 0.34 | ABZR87_RS10490 | | gamma carbonic anhydrase family protein | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS20860 | | transcriptional regulator GcvA | 0.50 | ABZR86_RS14950 | | gamma carbonic anhydrase family protein | low | > 74 |
| Ralstonia solanacearum PSI07 | 0.33 | RPSI07_RS11375 | | transcriptional regulator GcvA | 0.32 | RPSI07_RS18530 | | gamma carbonic anhydrase family protein | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.32 | RALBFv3_RS22095 | | transcriptional regulator GcvA | 0.31 | RALBFv3_RS14830 | | gamma carbonic anhydrase family protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.32 | QEN71_RS01310 | | transcriptional regulator GcvA | 0.33 | QEN71_RS12115 | | gamma carbonic anhydrase family protein | 0.33 | 60 |
| Ralstonia solanacearum UW163 | 0.32 | UW163_RS22635 | | transcriptional regulator GcvA | 0.31 | UW163_RS12300 | | gamma carbonic anhydrase family protein | — | — |
| Variovorax sp. SCN45 | 0.32 | GFF1355 | | Transcriptional regulator, LysR family | 0.39 | GFF2764 | | Carbonic anhydrase-like protein MJ0304 | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.31 | RR42_RS34190 | | LysR family transcriptional regulator | 0.61 | RR42_RS06425 | | anhydrase | low | > 128 |
| Pseudomonas fluorescens FW300-N2C3 | 0.31 | AO356_15125 | | LysR family transcriptional regulator | 0.67 | AO356_11115 | | anhydrase | low | > 104 |
| Pseudomonas aeruginosa PA14 | 0.31 | IKLFDK_23190 | | LysR family transcriptional regulator | 0.67 | IKLFDK_25220 | | gamma carbonic anhydrase family protein | low | > 101 |
| Pseudomonas sp. RS175 | 0.31 | PFR28_04727 | | Glycine cleavage system transcriptional activator | 0.68 | PFR28_04700 | | Protein YrdA | low | > 88 |
| Variovorax sp. OAS795 | 0.31 | ABID97_RS29015 | | transcriptional regulator GcvA | 0.37 | ABID97_RS20225 | | gamma carbonic anhydrase family protein | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.31 | H281DRAFT_02051 | | LysR family transcriptional regulator, glycine cleavage system transcriptional activator | 0.33 | H281DRAFT_00501 | | Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | low | > 103 |
| Sphingomonas koreensis DSMZ 15582 | 0.31 | Ga0059261_4130 | | Transcriptional regulator | 0.36 | Ga0059261_0268 | | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | low | > 68 |
| Pseudomonas sp. S08-1 | 0.31 | OH686_11695 | | Transcriptional regulator, LysR family | 0.66 | OH686_12365 | | Protein YrdA | low | > 80 |
| Pseudomonas sp. BP01 | 0.30 | JOY50_RS09180 | | LysR family transcriptional regulator | 0.65 | JOY50_RS21250 | | gamma carbonic anhydrase family protein | low | > 84 |
| Pseudomonas putida KT2440 | 0.30 | PP_0661 | | putative Transcriptional regulator AmpR | 0.66 | PP_0095 | | putative enzyme of unknown function | low | > 96 |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS01615 | | transcriptional regulator GcvA | 0.34 | ABIE40_RS10925 | | gamma carbonic anhydrase family protein | low | > 107 |
| Pseudomonas simiae WCS417 | 0.30 | PS417_23350 | | LysR family transcriptional regulator | 0.66 | PS417_00240 | | anhydrase | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.30 | Psest_2739 | | Transcriptional regulator | 0.65 | Psest_4319 | | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | low | > 67 |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS25165 | | LysR family transcriptional regulator | 0.67 | PFLU_RS00235 | | gamma carbonic anhydrase family protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS25165 | | LysR family transcriptional regulator | 0.67 | PFLU_RS00235 | | gamma carbonic anhydrase family protein | low | > 109 |
| Magnetospirillum magneticum AMB-1 | 0.30 | AMB_RS04220 | | transcriptional regulator GcvA | 0.42 | AMB_RS09070 | | gamma carbonic anhydrase family protein | low | > 64 |
| Pseudomonas fluorescens FW300-N1B4 | 0.30 | Pf1N1B4_1817 | | Glycine cleavage system transcriptional activator | 0.66 | Pf1N1B4_1843 | | carbonic anhydrase, family 3 | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_5015 | | transcriptional regulator, LysR family | 0.63 | Psyr_0044 | | transferase hexapeptide repeat protein | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_5015 | | transcriptional regulator, LysR family | 0.63 | Psyr_0044 | | transferase hexapeptide repeat protein | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_555 | | Glycine cleavage system transcriptional activator | 0.65 | PfGW456L13_625 | | carbonic anhydrase, family 3 | low | > 87 |
| Pseudomonas sp. DMC3 | 0.29 | GFF687 | | Glycine cleavage system transcriptional activator | 0.66 | GFF664 | | Protein YrdA | low | > 89 |
| Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_15505 | | LysR family transcriptional regulator | 0.67 | AO353_10770 | | anhydrase | low | > 101 |
| Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS07925 | | LysR family transcriptional regulator | 0.34 | HSERO_RS08610 | | anhydrase | low | > 78 |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS23870 | | transcriptional regulator GcvA | 0.27 | ABIE41_RS14005 | | gamma carbonic anhydrase family protein | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.28 | GFF4407 | | Glycine cleavage system transcriptional activator | 0.36 | GFF5446 | | carbonic anhydrase, family 3 | — | — |
| Acidovorax sp. GW101-3H11 | 0.28 | Ac3H11_902 | | Glycine cleavage system transcriptional activator | 0.49 | Ac3H11_4230 | | carbonic anhydrase, family 3 | — | — |
| Sinorhizobium meliloti 1021 | 0.28 | SMa0179 | | LysR family transcriptional regulator | 0.33 | SMc04241 | | acetyltransferase | low | > 103 |
| Dechlorosoma suillum PS | 0.27 | Dsui_2033 | | transcriptional regulator | 0.51 | Dsui_2380 | | isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase | low | > 51 |
| Acinetobacter radioresistens SK82 | 0.27 | MPMX26_01927 | | Glycine cleavage system transcriptional activator | 0.59 | MPMX26_01050 | | Protein YrdA | — | — |
| Castellaniella sp019104865 MT123 | 0.27 | ABCV34_RS01790 | | LysR substrate-binding domain-containing protein | 0.35 | ABCV34_RS13300 | | gamma carbonic anhydrase family protein | low | > 48 |
| Rhodanobacter denitrificans MT42 | 0.27 | LRK55_RS06375 | | transcriptional regulator GcvA | 0.48 | LRK55_RS08375 | | gamma carbonic anhydrase family protein | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.27 | LRK54_RS06630 | | transcriptional regulator GcvA | 0.48 | LRK54_RS08610 | | gamma carbonic anhydrase family protein | low | > 59 |
| Phaeobacter inhibens DSM 17395 | 0.26 | PGA1_c15720 | | putative glycine cleavage system transcriptional activator | 0.32 | PGA1_c15820 | | putative phenylacetic acid degradation protein | low | > 62 |
| Lysobacter sp. OAE881 | 0.26 | ABIE51_RS00605 | | LysR substrate-binding domain-containing protein | 0.47 | ABIE51_RS01770 | | gamma carbonic anhydrase family protein | low | > 62 |
| Rhodanobacter sp000427505 FW510-R12 | 0.26 | LRK53_RS10360 | | LysR substrate-binding domain-containing protein | 0.49 | LRK53_RS02385 | | gamma carbonic anhydrase family protein | low | > 60 |
| Dinoroseobacter shibae DFL-12 | 0.25 | Dshi_3068 | | transcriptional regulator, LysR family (RefSeq) | 0.32 | Dshi_1530 | | transferase hexapeptide repeat containing protein (RefSeq) | low | > 64 |
| Marinobacter adhaerens HP15 | 0.24 | HP15_1669 | | transcriptional regulator, LysR family protein | 0.58 | HP15_3758 | | transferase hexapeptide repeat protein | low | > 73 |
| Rhodopseudomonas palustris CGA009 | 0.23 | TX73_013680 | | LysR substrate-binding domain-containing protein | 0.32 | TX73_017715 | | gamma carbonic anhydrase family protein | low | > 86 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.22 | Xcc-8004.1418.1 | | Glycine cleavage system transcriptional activator | 0.47 | Xcc-8004.456.1 | | carbonic anhydrase, family 3 | — | — |
| Xanthobacter sp. DMC5 | 0.22 | GFF4114 | | HTH-type transcriptional regulator TrpI | 0.31 | GFF4616 | | Protein YrdA | — | — |
| Rhodanobacter sp. FW510-T8 | 0.18 | OKGIIK_16180 | | Biotin transporter BioY | 0.49 | OKGIIK_15375 | | Carnitine operon protein CaiE | low | > 52 |
Not shown: 1 genomes with orthologs for CSW01_04590 only; 15 genomes with orthologs for CSW01_00290 only