| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS02510 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 1.0 | BWI76_RS26085 | | 3-dehydroquinate synthase | 0.24 | 17 |
| Enterobacter asburiae PDN3 | 0.80 | EX28DRAFT_3364 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.88 | EX28DRAFT_4153 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.79 | ECOLIN_RS24205 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.84 | ECOLIN_RS19360 | | 3-dehydroquinate synthase | low | > 55 |
| Enterobacter sp. TBS_079 | 0.79 | MPMX20_00448 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.87 | MPMX20_04278 | | 3-dehydroquinate synthase | low | > 85 |
| Escherichia coli BW25113 | 0.79 | b4167 | yjeF | predicted carbohydrate kinase (NCBI) | 0.85 | b3389 | aroB | 3-dehydroquinate synthase (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.79 | ECD_04034 | | bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase | 0.84 | ECD_03241 | | 3-dehydroquinate synthase | low | > 61 |
| Escherichia coli ECRC99 | 0.78 | KEDOAH_15875 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.84 | KEDOAH_11025 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC102 | 0.78 | NIAGMN_10130 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.84 | NIAGMN_14885 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC98 | 0.78 | JDDGAC_15920 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.84 | JDDGAC_20745 | aroB | 3-dehydroquinate synthase | low | > 86 |
| Escherichia coli ECRC100 | 0.78 | OKFHMN_12280 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.84 | OKFHMN_17115 | aroB | 3-dehydroquinate synthase | low | > 80 |
| Escherichia coli ECRC101 | 0.78 | MCAODC_02795 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.84 | MCAODC_07645 | aroB | 3-dehydroquinate synthase | low | > 87 |
| Escherichia fergusonii Becca | 0.78 | EFB2_04368 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.84 | EFB2_00439 | | 3-dehydroquinate synthase | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.78 | OHPLBJKB_03875 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.84 | OHPLBJKB_00314 | | 3-dehydroquinate synthase | low | > 73 |
| Escherichia coli ECOR27 | 0.78 | NOLOHH_04545 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.84 | NOLOHH_08905 | aroB | 3-dehydroquinate synthase | low | > 75 |
| Escherichia coli ECRC62 | 0.78 | BNILDI_06945 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.84 | BNILDI_02615 | aroB | 3-dehydroquinate synthase | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.78 | GFF820 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.80 | GFF630 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 78 |
| Escherichia coli ECOR38 | 0.78 | HEPCGN_10510 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.84 | HEPCGN_15935 | aroB | 3-dehydroquinate synthase | low | > 87 |
| Erwinia tracheiphila SCR3 | 0.67 | LU632_RS02030 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.80 | LU632_RS22865 | aroB | 3-dehydroquinate synthase | low | > 74 |
| Rahnella sp. WP5 | 0.65 | EX31_RS08845 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.81 | EX31_RS04720 | | 3-dehydroquinate synthase | — | — |
| Dickeya dianthicola 67-19 | 0.64 | HGI48_RS18570 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.78 | HGI48_RS19675 | | 3-dehydroquinate synthase | — | — |
| Pantoea sp. MT58 | 0.64 | IAI47_02565 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.83 | IAI47_01895 | | 3-dehydroquinate synthase | — | — |
| Dickeya dianthicola ME23 | 0.63 | DZA65_RS19705 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.78 | DZA65_RS20760 | | 3-dehydroquinate synthase | — | — |
| Serratia liquefaciens MT49 | 0.63 | IAI46_01600 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.81 | IAI46_23700 | | 3-dehydroquinate synthase | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS02560 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.77 | HER17_RS01780 | | 3-dehydroquinate synthase | low | > 75 |
| Dickeya dadantii 3937 | 0.60 | DDA3937_RS18635 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.79 | DDA3937_RS19545 | | 3-dehydroquinate synthase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_14940 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.62 | CSW01_13300 | | 3-dehydroquinate synthase | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.38 | MIT1002_03793 | | Nicotinamide nucleotide repair protein | 0.59 | MIT1002_00447 | | 3-dehydroquinate synthase | — | — |
| Shewanella amazonensis SB2B | 0.36 | Sama_3030 | | YjeF protein (RefSeq) | 0.61 | Sama_3367 | | 3-dehydroquinate synthase (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.36 | Shewana3_0592 | | carbohydrate kinase, YjeF related protein (RefSeq) | 0.61 | Shewana3_3893 | aroB | 3-dehydroquinate synthase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.36 | SO0598 | yjeF | yjeF protein (NCBI ptt file) | 0.61 | SO0287 | aroB | 3-dehydroquinate synthase (NCBI ptt file) | low | > 76 |
| Rhodanobacter denitrificans FW104-10B01 | 0.34 | LRK54_RS15135 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.41 | LRK54_RS04310 | | 3-dehydroquinate synthase | — | — |
| Shewanella loihica PV-4 | 0.34 | Shew_0561 | | carbohydrate kinase, YjeF-related protein (RefSeq) | 0.58 | Shew_0214 | | 3-dehydroquinate synthase (RefSeq) | low | > 60 |
| Rhodanobacter denitrificans MT42 | 0.34 | LRK55_RS14850 | | NAD(P)H-hydrate dehydratase | 0.41 | LRK55_RS04085 | | 3-dehydroquinate synthase | — | — |
| Lysobacter sp. OAE881 | 0.34 | ABIE51_RS08050 | | NAD(P)H-hydrate dehydratase | 0.41 | ABIE51_RS16100 | | 3-dehydroquinate synthase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS00840 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.41 | ABZR86_RS10480 | | 3-dehydroquinate synthase | low | > 74 |
| Marinobacter adhaerens HP15 | 0.31 | HP15_2504 | | carbohydrate kinase, YjeF related protein | 0.51 | HP15_480 | | 3-dehydroquinate synthase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.31 | Xcc-8004.2253.1 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.40 | Xcc-8004.1615.1 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 74 |
| Pseudomonas stutzeri RCH2 | 0.31 | Psest_0678 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.52 | Psest_3713 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.31 | Pf1N1B4_1417 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.55 | Pf1N1B4_1537 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Rhodanobacter sp. FW510-T8 | 0.31 | OKGIIK_03905 | | Bifunctional NAD(P)H-hydrate repair enzyme | 0.41 | OKGIIK_11185 | aroB | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. RS175 | 0.30 | PFR28_05116 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.54 | PFR28_05013 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.30 | Pf6N2E2_3619 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.55 | Pf6N2E2_3754 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_159 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.55 | PfGW456L13_275 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.30 | AO356_08680 | | carbohydrate kinase | 0.55 | AO356_09385 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.30 | AO353_13120 | | carbohydrate kinase | 0.54 | AO353_12505 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. S08-1 | 0.28 | OH686_09495 | | NAD(P)H-hydrate epimerase / ADP-dependent (S)-NAD(P)H-hydrate dehydratase | 0.53 | OH686_10015 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.28 | Psyr_0567 | | Protein of unknown function UPF0031:YjeF-related protein, N-terminal | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.28 | Psyr_0567 | | Protein of unknown function UPF0031:YjeF-related protein, N-terminal | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Kangiella aquimarina DSM 16071 | 0.27 | B158DRAFT_1947 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.42 | B158DRAFT_0764 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 40 |
| Burkholderia phytofirmans PsJN | 0.26 | BPHYT_RS09505 | | carbohydrate kinase | 0.50 | BPHYT_RS17885 | | 3-dehydroquinate synthase | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.24 | ABZR87_RS12740 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.50 | ABZR87_RS02590 | | 3-dehydroquinate synthase | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.24 | RALBFv3_RS01295 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.49 | RALBFv3_RS06935 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum UW163 | 0.24 | UW163_RS14605 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.49 | UW163_RS06680 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia graminis OAS925 | 0.24 | ABIE53_002139 | | hydroxyethylthiazole kinase-like uncharacterized protein yjeF | 0.51 | ABIE53_003740 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum GMI1000 | 0.23 | RS_RS08700 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.50 | RS_RS14880 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.23 | H281DRAFT_00907 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.50 | H281DRAFT_05615 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum PSI07 | 0.23 | RPSI07_RS16180 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.50 | RPSI07_RS10300 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.22 | QEN71_RS21930 | | NAD(P)H-hydrate dehydratase | 0.51 | QEN71_RS28035 | | 3-dehydroquinate synthase | low | > 153 |
| Parabacteroides merdae CL09T00C40 | 0.21 | HMPREF1078_RS15325 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.20 | HMPREF1078_RS04395 | | 3-dehydroquinate synthase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS09070 | | carbohydrate kinase | 0.52 | RR42_RS19005 | | 3-dehydroquinate synthase | low | > 128 |
| Acinetobacter radioresistens SK82 | 0.21 | MPMX26_01782 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.50 | MPMX26_02810 | | 3-dehydroquinate synthase | — | — |
| Castellaniella sp019104865 MT123 | 0.20 | ABCV34_RS02980 | | NAD(P)H-hydrate dehydratase | 0.45 | ABCV34_RS12705 | | 3-dehydroquinate synthase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.20 | CA264_16280 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.21 | CA264_13105 | | 3-dehydroquinate synthase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.20 | BT4383 | | putative sugar kinase (NCBI ptt file) | 0.20 | BT3975 | | 3-dehydroquinate synthase (NCBI ptt file) | — | — |
| Dechlorosoma suillum PS | 0.20 | Dsui_2898 | | yjeF-like protein, hydroxyethylthiazole kinase-related protein | 0.52 | Dsui_1095 | | 3-dehydroquinate synthase | — | — |
| Bacteroides stercoris CC31F | 0.20 | HMPREF1181_RS06260 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.21 | HMPREF1181_RS09265 | | 3-dehydroquinate synthase | low | > 56 |
| Rhizobium sp. OAE497 | 0.20 | ABIE40_RS09345 | | NAD(P)H-hydrate dehydratase | 0.38 | ABIE40_RS17670 | | 3-dehydroquinate synthase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.19 | BACOVA_05215 | | YjeF domain protein | 0.20 | BACOVA_04629 | | 3-dehydroquinate synthase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.18 | CA265_RS24885 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.23 | CA265_RS04615 | | 3-dehydroquinate synthase | low | > 88 |
| Acidovorax sp. GW101-3H11 | 0.18 | Ac3H11_415 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.50 | Ac3H11_4705 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 79 |
| Azospirillum sp. SherDot2 | 0.18 | MPMX19_01552 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.38 | MPMX19_02639 | | 3-dehydroquinate synthase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.18 | Echvi_0073 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.20 | Echvi_0121 | | 3-dehydroquinate synthase | — | — |
| Azospirillum brasilense Sp245 | 0.18 | AZOBR_RS07115 | | hypothetical protein | 0.37 | AZOBR_RS03220 | | 3-dehydroquinate synthase | — | — |
| Variovorax sp. SCN45 | 0.17 | GFF397 | | NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) | 0.49 | GFF5325 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 127 |
| Variovorax sp. OAS795 | 0.17 | ABID97_RS17190 | | NAD(P)H-hydrate dehydratase | 0.53 | ABID97_RS23255 | | 3-dehydroquinate synthase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.17 | ABZR88_RS18865 | | NAD(P)H-hydrate dehydratase | 0.23 | ABZR88_RS05215 | | 3-dehydroquinate synthase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.16 | GFF4918 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.48 | GFF1331 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 90 |
| Sinorhizobium meliloti 1021 | 0.15 | SMc00946 | | hypothetical protein | 0.37 | SMc00696 | | 3-dehydroquinate synthase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.15 | TX73_015380 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.36 | TX73_002610 | | 3-dehydroquinate synthase | — | — |
| Agrobacterium fabrum C58 | 0.15 | Atu1768 | | hypothetical protein | 0.36 | Atu3625 | | 3-dehydroquinate synthase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.14 | Dshi_1837 | | carbohydrate kinase, YjeF related protein (RefSeq) | 0.35 | Dshi_1608 | | 3-dehydroquinate synthase (RefSeq) | — | — |
| Caulobacter crescentus NA1000 | 0.14 | CCNA_02043 | | sugar kinase | 0.39 | CCNA_03104 | | 3-dehydroquinate synthase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.14 | CCNA_02043 | | sugar kinase | 0.39 | CCNA_03104 | | 3-dehydroquinate synthase | low | > 67 |
| Sphingomonas koreensis DSMZ 15582 | 0.14 | Ga0059261_0649 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.35 | Ga0059261_3591 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.13 | PGA1_c18700 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.38 | PGA1_c14100 | | 3-dehydroquinate synthase AroB | — | — |
| Magnetospirillum magneticum AMB-1 | 0.13 | AMB_RS14075 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.39 | AMB_RS19865 | | 3-dehydroquinate synthase | — | — |
| Mycobacterium tuberculosis H37Rv | 0.12 | Rv3433c | | Conserved protein | 0.29 | Rv2538c | | 3-dehydroquinate synthase AroB | — | — |
| Rhodospirillum rubrum S1H | 0.11 | Rru_A1547 | | hypothetical protein (NCBI) | 0.41 | Rru_A3741 | | 3-dehydroquinate synthase (NCBI) | — | — |
| Synechococcus elongatus PCC 7942 | 0.10 | Synpcc7942_1273 | | hypothetical protein | 0.39 | Synpcc7942_0525 | aroB | 3-dehydroquinate synthase | — | — |
Not shown: 6 genomes with orthologs for BWI76_RS02510 only; 5 genomes with orthologs for BWI76_RS26085 only