Conservation of cofitness between BWI76_RS27390 and BWI76_RS00975 in Klebsiella michiganensis M5al

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Klebsiella michiganensis M5al 1.0 BWI76_RS27390 ribonuclease PH 1.0 BWI76_RS00975 dihydroxy-acid dehydratase 0.66 16
Enterobacter sp. TBS_079 0.94 MPMX20_00092 Ribonuclease PH 0.96 MPMX20_04499 Dihydroxy-acid dehydratase low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3893 ribonuclease PH 0.97 EX28DRAFT_4443 dihydroxy-acid dehydratase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.96 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Escherichia coli BL21 0.92 ECD_03500 ribonuclease PH 0.96 ECD_03649 dihydroxyacid dehydratase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_00059 Ribonuclease PH 0.96 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli ECRC62 0.92 BNILDI_04045 rph ribonuclease PH 0.96 BNILDI_04750 ilvD dihydroxy-acid dehydratase low > 75
Escherichia coli ECRC101 0.92 MCAODC_06100 rph ribonuclease PH 0.96 MCAODC_05145 ilvD dihydroxy-acid dehydratase low > 87
Escherichia coli ECRC98 0.92 JDDGAC_19215 rph ribonuclease PH 0.96 JDDGAC_18260 ilvD dihydroxy-acid dehydratase low > 86
Escherichia coli Nissle 1917 0.92 ECOLIN_RS20755 ribonuclease PH 0.96 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 55
Escherichia coli ECOR27 0.92 NOLOHH_07470 rph ribonuclease PH 0.96 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 75
Escherichia coli ECRC102 0.92 NIAGMN_13350 rph ribonuclease PH 0.96 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC100 0.92 OKFHMN_15590 rph ribonuclease PH 0.96 OKFHMN_14640 ilvD dihydroxy-acid dehydratase low > 80
Escherichia fergusonii Becca 0.92 EFB2_00170 Ribonuclease PH 0.96 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli ECOR38 0.92 HEPCGN_14410 rph ribonuclease PH 0.96 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 87
Escherichia coli ECRC99 0.92 KEDOAH_12555 rph ribonuclease PH 0.96 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Dickeya dadantii 3937 0.89 DDA3937_RS20540 ribonuclease PH 0.90 DDA3937_RS20155 dihydroxy-acid dehydratase low > 74
Dickeya dianthicola 67-19 0.89 HGI48_RS00675 ribonuclease PH 0.89 HGI48_RS20295 dihydroxy-acid dehydratase low > 71
Dickeya dianthicola ME23 0.89 DZA65_RS00730 ribonuclease PH 0.90 DZA65_RS21335 dihydroxy-acid dehydratase low > 75
Pantoea sp. MT58 0.89 IAI47_00595 ribonuclease PH 0.88 IAI47_01035 dihydroxy-acid dehydratase 0.49 45
Erwinia tracheiphila SCR3 0.88 LU632_RS22020 rph ribonuclease PH 0.86 LU632_RS24400 ilvD dihydroxy-acid dehydratase low > 74
Escherichia coli BW25113 0.87 b3643 rph ribonuclease PH (NCBI) 0.96 b3771 ilvD dihydroxy-acid dehydratase (NCBI) low > 76
Serratia liquefaciens MT49 0.87 IAI46_24850 ribonuclease PH 0.90 IAI46_24345 dihydroxy-acid dehydratase low > 86
Rahnella sp. WP5 0.87 EX31_RS14505 ribonuclease PH 0.87 EX31_RS15005 dihydroxy-acid dehydratase 0.70 48
Pectobacterium carotovorum WPP14 0.86 HER17_RS20855 ribonuclease PH 0.91 HER17_RS01075 dihydroxy-acid dehydratase low > 75
Shewanella amazonensis SB2B 0.78 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.78 Sama_3279 dihydroxy-acid dehydratase (RefSeq) low > 62
Shewanella loihica PV-4 0.78 Shew_3488 ribonuclease PH (RefSeq) 0.78 Shew_0292 dihydroxy-acid dehydratase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.77 SO4256 rph ribonuclease PH (NCBI ptt file) 0.79 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_01115 ribonuclease PH 0.85 CSW01_00140 dihydroxy-acid dehydratase low > 62
Shewanella sp. ANA-3 0.77 Shewana3_3777 RNAse PH (RefSeq) 0.80 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.75 MIT1002_04071 Ribonuclease PH 0.78 MIT1002_04041 Dihydroxy-acid dehydratase low > 70
Marinobacter adhaerens HP15 0.70 HP15_300 ribonuclease PH 0.70 HP15_595 dihydroxy-acid dehydratase low > 73
Pseudomonas sp. S08-1 0.70 OH686_13570 ribonuclease PH 0.74 OH686_14100 dihydroxy-acid dehydratase low > 80
Pseudomonas stutzeri RCH2 0.69 Psest_3813 ribonuclease PH 0.74 Psest_0234 dihydroxy-acid dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_0213 RNAse PH 0.74 Psyr_0469 dihydroxyacid dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_0213 RNAse PH 0.74 Psyr_0469 dihydroxyacid dehydratase low > 86
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.75 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Pseudomonas putida KT2440 0.68 PP_5294 Ribonuclease PH 0.73 PP_5128 Dihydroxy-acid dehydratase low > 96
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.74 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 103
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_12500 ribonuclease PH 0.74 AO356_13250 dihydroxy-acid dehydratase low > 104
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.74 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Dechlorosoma suillum PS 0.68 Dsui_0494 ribonuclease PH 0.73 Dsui_1122 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_09260 ribonuclease PH 0.74 AO353_08345 dihydroxy-acid dehydratase low > 101
Pseudomonas sp. RS175 0.68 PFR28_04420 Ribonuclease PH 0.75 PFR28_04278 Dihydroxy-acid dehydratase low > 88
Pseudomonas simiae WCS417 0.68 PS417_27810 ribonuclease PH 0.75 PS417_26890 dihydroxy-acid dehydratase low > 88
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS29490 ribonuclease PH 0.74 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS29490 ribonuclease PH 0.74 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) 0.71 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 74
Variovorax sp. SCN45 0.67 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Acinetobacter radioresistens SK82 0.67 MPMX26_00040 Ribonuclease PH 0.29 MPMX26_03019 Dihydroxy-acid dehydratase low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF3254 Ribonuclease PH (EC 2.7.7.56) 0.64 GFF2098 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 90
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS03645 ribonuclease PH 0.73 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_04008 RNAse PH 0.74 H281DRAFT_05312 dihydroxyacid dehydratase low > 103
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS15325 ribonuclease PH 0.73 BPHYT_RS10100 dihydroxy-acid dehydratase low > 109
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS15255 ribonuclease PH 0.74 ABZR87_RS00240 dihydroxy-acid dehydratase low > 80
Paraburkholderia graminis OAS925 0.65 ABIE53_003234 ribonuclease PH 0.73 ABIE53_006513 dihydroxy-acid dehydratase low > 113
Variovorax sp. OAS795 0.64 ABID97_RS23640 ribonuclease PH 0.31 ABID97_RS17500 dihydroxy-acid dehydratase — —
Ralstonia solanacearum PSI07 0.64 RPSI07_RS13840 ribonuclease PH 0.29 RPSI07_RS12840 dihydroxy-acid dehydratase — —
Ralstonia solanacearum GMI1000 0.64 RS_RS10830 ribonuclease PH 0.28 RS_RS12105 dihydroxy-acid dehydratase — —
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS10655 ribonuclease PH 0.73 HSERO_RS02650 dihydroxy-acid dehydratase low > 78
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS11900 ribonuclease PH 0.28 ABZR86_RS15945 dihydroxy-acid dehydratase low > 74
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS03345 ribonuclease PH 0.28 RALBFv3_RS04535 dihydroxy-acid dehydratase — —
Ralstonia solanacearum UW163 0.63 UW163_RS10375 ribonuclease PH 0.28 UW163_RS09135 dihydroxy-acid dehydratase — —
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS04890 ribonuclease PH 0.29 RR42_RS16210 dihydroxy-acid dehydratase — —
Lysobacter sp. OAE881 0.62 ABIE51_RS17285 ribonuclease PH 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase low > 62
Azospirillum brasilense Sp245 0.62 AZOBR_RS02205 ribonuclease PH 0.74 AZOBR_RS15015 dihydroxy-acid dehydratase low > 97
Acidovorax sp. GW101-3H11 0.61 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.73 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 79
Castellaniella sp019104865 MT123 0.61 ABCV34_RS03515 ribonuclease PH 0.73 ABCV34_RS14810 dihydroxy-acid dehydratase low > 48
Rhodanobacter denitrificans MT42 0.60 LRK55_RS11470 ribonuclease PH 0.25 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Agrobacterium fabrum C58 0.60 Atu0327 ribonuclease PH 0.73 Atu1918 dihydroxy-acid dehydratase — —
Rhodanobacter denitrificans FW104-10B01 0.60 LRK54_RS11745 ribonuclease PH 0.25 LRK54_RS10320 dihydroxy-acid dehydratase low > 59
Rhodopseudomonas palustris CGA009 0.60 TX73_001710 ribonuclease PH 0.74 TX73_007515 dihydroxy-acid dehydratase — —
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_12150 rph ribonuclease PH 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase — —
Bosea sp. OAE506 0.59 ABIE41_RS03295 ribonuclease PH 0.29 ABIE41_RS15690 dihydroxy-acid dehydratase — —
Sinorhizobium meliloti 1021 0.59 SMc01144 ribonuclease PH 0.74 SMc04045 dihydroxy-acid dehydratase low > 103
Azospirillum sp. SherDot2 0.59 MPMX19_02576 Ribonuclease PH 0.73 MPMX19_05356 Dihydroxy-acid dehydratase — —
Rhizobium sp. OAE497 0.59 ABIE40_RS01640 ribonuclease PH 0.75 ABIE40_RS08005 dihydroxy-acid dehydratase low > 107
Dinoroseobacter shibae DFL-12 0.58 Dshi_3463 ribonuclease PH (RefSeq) 0.30 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.58 AMB_RS22760 ribonuclease PH 0.72 AMB_RS12770 dihydroxy-acid dehydratase — —
Rhodospirillum rubrum S1H 0.58 Rru_A3641 Ribonuclease PH (NCBI) 0.71 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) low > 58
Phaeobacter inhibens DSM 17395 0.57 PGA1_c35030 ribonuclease PH 0.70 PGA1_c29490 dihydroxy-acid dehydratase LivD low > 62
Caulobacter crescentus NA1000 0.55 CCNA_00151 ribonuclease PH 0.72 CCNA_03139 dihydroxy-acid dehydratase low > 66
Caulobacter crescentus NA1000 Δfur 0.55 CCNA_00151 ribonuclease PH 0.72 CCNA_03139 dihydroxy-acid dehydratase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.55 A4249_RS13125 ribonuclease PH 0.24 A4249_RS10030 dihydroxy-acid dehydratase low > 48
Mycobacterium tuberculosis H37Rv 0.55 Rv1340 Probable ribonuclease RphA (RNase PH) (tRNA nucleotidyltransferase) 0.31 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) — —
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_2741 ribonuclease PH 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase — —
Bifidobacterium breve UCC2003 0.52 BBR_RS12405 ribonuclease PH 0.56 BBR_RS17635 dihydroxy-acid dehydratase low > 34
Synechococcus elongatus PCC 7942 0.51 Synpcc7942_1073 rph ribonuclease PH 0.74 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase — —

Not shown: 1 genomes with orthologs for BWI76_RS27390 only; 14 genomes with orthologs for BWI76_RS00975 only